RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SPTY2D1Q68D10 685 aaPredicted RBP13.23□□□□□ -0.29
USP35-207ENST00000530546 MAP3K14Q99558 947 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 LEMD3Q9Y2U8 911 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 V9GY48 417 aaPredicted RBP13.23□□□□□ -0.29
USP35-207ENST00000530546 XDHP47989 1333 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 TSPY2A6NKD2 308 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 SYKP43405 635 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 ST5P78524 1137 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 RAD51AP2Q09MP3 1159 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 MUM1L1Q5H9M0 696 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 SHC4Q6S5L8 630 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 AOPEPQ8N6M6 819 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 JMYQ8N9B5 988 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 SH3RF3Q8TEJ3 882 aaPredicted RBP13.23□□□□□ -0.29
USP35-207ENST00000530546 KIAA1468Q9P260 1216 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 NRBP1Q9UHY1 535 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 MTMR7Q9Y216 660 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 KIF2AO00139 706 aaPredicted RBP13.23□□□□□ -0.29
USP35-207ENST00000530546 NYAP1Q6ZVC0 841 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 CEP57L1Q8IYX8 460 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 DYNLL2Q96FJ2 89 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 MTA3Q9BTC8 594 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 ATP8A2Q9NTI2 1148 aa13.23□□□□□ -0.29
USP35-207ENST00000530546 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.23□□□□□ -0.29
USP35-207ENST00000530546 IRS2Q9Y4H2 1338 aa13.22□□□□□ -0.29
USP35-207ENST00000530546 ONECUT3O60422 494 aaPredicted RBP13.22□□□□□ -0.29
USP35-207ENST00000530546 PTPN14Q15678 1187 aa13.22□□□□□ -0.29
USP35-207ENST00000530546 TEX35Q5T0J7 233 aa13.22□□□□□ -0.29
USP35-207ENST00000530546 ZNF804AQ7Z570 1209 aa13.22□□□□□ -0.29
USP35-207ENST00000530546 WDR66Q8TBY9 1149 aa13.22□□□□□ -0.29
USP35-207ENST00000530546 CABP5Q9NP86 173 aa13.22□□□□□ -0.29
USP35-207ENST00000530546 COL24A1Q17RW2 1714 aa13.22□□□□□ -0.29
USP35-207ENST00000530546 SLU7O95391 586 aaKnown RBP13.22□□□□□ -0.29
USP35-207ENST00000530546 TOB1P50616 345 aaPredicted RBP13.22□□□□□ -0.29
USP35-207ENST00000530546 DPCR1Q3MIW9 517 aa13.22□□□□□ -0.29
USP35-207ENST00000530546 TXLNBQ8N3L3 684 aa13.22□□□□□ -0.29
USP35-207ENST00000530546 ZFP91Q96JP5 570 aaPredicted RBP13.22□□□□□ -0.29
USP35-207ENST00000530546 SAP30BPQ9UHR5 308 aaKnown RBP13.22□□□□□ -0.29
USP35-207ENST00000530546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.22□□□□□ -0.29
USP35-207ENST00000530546 PDS5AQ29RF7 1337 aaKnown RBP13.21□□□□□ -0.29
USP35-207ENST00000530546 FAM205CA6NFA0 338 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 PDE4BQ07343 736 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 ELF2Q15723 593 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 ZNF592Q92610 1267 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 ARPP21Q9UBL0 812 aaPredicted RBP13.21□□□□□ -0.29
USP35-207ENST00000530546 PCDHB6Q9Y5E3 794 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 MYH2Q9UKX2 1941 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 NID2Q14112 1375 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 PPP6R2O75170 966 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 CAVIN2O95810 425 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
USP35-207ENST00000530546 H2AFXP16104 143 aaPredicted RBP13.21□□□□□ -0.29
USP35-207ENST00000530546 ADRA2BP18089 450 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 GRIN1Q05586 938 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 RGS22Q8NE09 1264 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 TGFBRAP1Q8WUH2 860 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 SHISA4Q96DD7 197 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 KCND1Q9NSA2 647 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 ZNF446Q9NWS9 450 aa13.21□□□□□ -0.29
USP35-207ENST00000530546 MYH13Q9UKX3 1938 aa13.21□□□□□ -0.3
USP35-207ENST00000530546 TROAPQ12815 778 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 MAPK8IP2Q13387 824 aaPredicted RBP13.2□□□□□ -0.3
USP35-207ENST00000530546 MAPKAPK5Q8IW41 473 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 DHX40Q8IX18 779 aaKnown RBP13.2□□□□□ -0.3
USP35-207ENST00000530546 CACTINQ8WUQ7 758 aaKnown RBP13.2□□□□□ -0.3
USP35-207ENST00000530546 RNF26Q9BY78 433 aaPredicted RBP13.2□□□□□ -0.3
USP35-207ENST00000530546 DUOX1Q9NRD9 1551 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 C6orf229H3BNL8 230 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 TFAP4Q01664 338 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 DDR1Q08345 913 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 PKN1Q16512 942 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 KRT27Q7Z3Y8 459 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
USP35-207ENST00000530546 RBM17Q96I25 401 aaKnown RBP13.2□□□□□ -0.3
USP35-207ENST00000530546 FOXP1Q9H334 677 aaPredicted RBP13.2□□□□□ -0.3
USP35-207ENST00000530546 CLIP2Q9UDT6 1046 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 GGA1Q9UJY5 639 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 TAF1LQ8IZX4 1826 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 ORC4O43929 436 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 FGRP09769 529 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 TNNT3P45378 269 aaPredicted RBP13.2□□□□□ -0.3
USP35-207ENST00000530546 KRI1Q8N9T8 703 aaKnown RBP13.2□□□□□ -0.3
USP35-207ENST00000530546 SLC44A5Q8NCS7 719 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 NAT10Q9H0A0 1025 aaKnown RBP13.2□□□□□ -0.3
USP35-207ENST00000530546 MKNK2Q9HBH9 465 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 CD209Q9NNX6 404 aa13.2□□□□□ -0.3
USP35-207ENST00000530546 CUTAO60888 179 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 PCP11498 1178 aaKnown RBP13.19□□□□□ -0.3
USP35-207ENST00000530546 XBP1P17861 261 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 RCAN1P53805 252 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 PNOCQ13519 176 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 RASSF4Q9H2L5 321 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 ST7Q9NRC1 585 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 KCNH3Q9ULD8 1083 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 LY75O60449 1722 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 BAG3O95817 575 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 TPM4P67936 248 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 FUT2Q10981 343 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 LONRF3Q496Y0 759 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 RILPL1Q5EBL4 403 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms