RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 CEP135Q66GS9 1140 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 C11orf57Q6ZUT1 292 aaPredicted RBP11.22□□□□□ -0.61
USP35-201ENST00000526425 GOLPH3LQ9H4A5 285 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.22□□□□□ -0.61
USP35-201ENST00000526425 G3BP2Q9UN86 482 aaKnown RBP11.22□□□□□ -0.61
USP35-201ENST00000526425 PRDX5P30044 214 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 TMCO3Q6UWJ1 677 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 STAMQ92783 540 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 CENPHQ9H3R5 247 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 SMTNL1A8MU46 457 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 SERPINB2P05120 415 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 NR5A1Q13285 461 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 TMEM87AQ8NBN3 555 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 TMEM87BQ96K49 555 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 BSDC1Q9NW68 430 aaPredicted RBP11.21□□□□□ -0.61
USP35-201ENST00000526425 TNKSO95271 1327 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 AFDNP55196 1824 aaKnown RBP11.21□□□□□ -0.61
USP35-201ENST00000526425 UBE4AQ14139 1066 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 NBPF20Q3BBV1 942 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 TMC6Q7Z403 805 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 ZNF654Q8IZM8 581 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 ZNF444Q8N0Y2 327 aaPredicted RBP11.21□□□□□ -0.61
USP35-201ENST00000526425 WASF1Q92558 559 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 RABEP2Q9H5N1 569 aa11.21□□□□□ -0.61
USP35-201ENST00000526425 KIF28PB7ZC32 967 aa11.21□□□□□ -0.62
USP35-201ENST00000526425 ZNF202O95125 648 aa11.21□□□□□ -0.62
USP35-201ENST00000526425 TPM1P09493 284 aa11.21□□□□□ -0.62
USP35-201ENST00000526425 CYP2D6P10635 497 aa11.21□□□□□ -0.62
USP35-201ENST00000526425 FDPSP14324 419 aaKnown RBP11.21□□□□□ -0.62
USP35-201ENST00000526425 PSMD2Q13200 908 aa11.21□□□□□ -0.62
USP35-201ENST00000526425 SF3B3Q15393 1217 aaKnown RBP11.21□□□□□ -0.62
USP35-201ENST00000526425 MINPP1Q9UNW1 487 aa11.21□□□□□ -0.62
USP35-201ENST00000526425 DOT1LQ8TEK3 1739 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 LAMB4A4D0S4 1761 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 GSG1L2A8MUP6 293 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 SH2B2O14492 632 aaPredicted RBP11.2□□□□□ -0.62
USP35-201ENST00000526425 NMT2O60551 498 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 UFL1O94874 794 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 MAPKAPK5Q8IW41 473 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 KIAA1524Q8TCG1 905 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 EPB41L4AQ9HCS5 686 aaPredicted RBP11.2□□□□□ -0.62
USP35-201ENST00000526425 CTAGE5O15320 804 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 PHACTR2O75167 634 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 LDHBP07195 334 aaKnown RBP11.2□□□□□ -0.62
USP35-201ENST00000526425 GNAT2P19087 354 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 EIF6P56537 245 aaKnown RBP11.2□□□□□ -0.62
USP35-201ENST00000526425 ZNF174Q15697 407 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 PLIN2Q99541 437 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 LRRC4BQ9NT99 713 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 TOGARAM1Q9Y4F4 1720 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 ZMYM6O95789 1325 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 RDXP35241 583 aaKnown RBP11.2□□□□□ -0.62
USP35-201ENST00000526425 SRLQ86TD4 932 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 ZSCAN29Q8IWY8 852 aaPredicted RBP11.2□□□□□ -0.62
USP35-201ENST00000526425 SMARCC2Q8TAQ2 1214 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 DHX58Q96C10 678 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 UIMC1Q96RL1 719 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 JPH2Q9BR39 696 aaPredicted RBP11.2□□□□□ -0.62
USP35-201ENST00000526425 PICK1Q9NRD5 415 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 HOOK1Q9UJC3 728 aaKnown RBP11.2□□□□□ -0.62
USP35-201ENST00000526425 ARFGEF2Q9Y6D5 1785 aa11.2□□□□□ -0.62
USP35-201ENST00000526425 PFKFB1P16118 471 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 GUCY1A2P33402 732 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 BRAPQ7Z569 592 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 PARP3Q9Y6F1 533 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 SEC31AO94979 1220 aaKnown RBP11.19□□□□□ -0.62
USP35-201ENST00000526425 KIF23Q02241 960 aaPredicted RBP11.19□□□□□ -0.62
USP35-201ENST00000526425 PNOCQ13519 176 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 ZNF827Q17R98 1081 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 ARHGAP29Q52LW3 1261 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 MSL1Q68DK7 614 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 MCTP2Q6DN12 878 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 TGFBRAP1Q8WUH2 860 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 RBM17Q96I25 401 aaKnown RBP11.19□□□□□ -0.62
USP35-201ENST00000526425 KAT14Q9H8E8 782 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 IFNKQ9P0W0 207 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 ONECUT3O60422 494 aaPredicted RBP11.19□□□□□ -0.62
USP35-201ENST00000526425 STX17P56962 302 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 PDE4BQ07343 736 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 PTPN14Q15678 1187 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 GBP6Q6ZN66 633 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 PRDM16Q9HAZ2 1276 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 RBM28Q9NW13 759 aaKnown RBP11.19□□□□□ -0.62
USP35-201ENST00000526425 RCOR1Q9UKL0 485 aa11.19□□□□□ -0.62
USP35-201ENST00000526425 RFX7Q2KHR2 1363 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 TSPY3P0CV98 308 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 TSPY8P0CW00 308 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 OAS2P29728 719 aaKnown RBP11.18□□□□□ -0.62
USP35-201ENST00000526425 IKQ13123 557 aaPredicted RBP11.18□□□□□ -0.62
USP35-201ENST00000526425 NLGN1Q8N2Q7 840 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 FANCBQ8NB91 859 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 NKX2-3Q8TAU0 364 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 CPLX3Q8WVH0 158 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 DYNLL2Q96FJ2 89 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 ELP1O95163 1332 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 POLR2DO15514 142 aaKnown RBP11.18□□□□□ -0.62
USP35-201ENST00000526425 USP17L8P0C7I0 530 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 NAP1L1P55209 391 aaKnown RBP11.18□□□□□ -0.62
USP35-201ENST00000526425 MFSD4BQ5TF39 518 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms