RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ERICH6Q7L0X2 663 aa21.69■■□□□ 1.06
PVT1-220ENST00000524165 ZNF384Q8TF68 577 aa21.69■■□□□ 1.06
PVT1-220ENST00000524165 DHX36Q9H2U1 1008 aaKnown RBP21.69■■□□□ 1.06
PVT1-220ENST00000524165 EMILIN3Q9NT22 766 aa21.69■■□□□ 1.06
PVT1-220ENST00000524165 SEPT4O43236 478 aa21.68■■□□□ 1.06
PVT1-220ENST00000524165 LDHCP07864 332 aa21.68■■□□□ 1.06
PVT1-220ENST00000524165 RAG1P15918 1043 aa21.68■■□□□ 1.06
PVT1-220ENST00000524165 JAG1P78504 1218 aa21.68■■□□□ 1.06
PVT1-220ENST00000524165 OLFML2BQ68BL8 750 aa21.68■■□□□ 1.06
PVT1-220ENST00000524165 USP17L2Q6R6M4 530 aa21.68■■□□□ 1.06
PVT1-220ENST00000524165 USP44Q9H0E7 712 aa21.68■■□□□ 1.06
PVT1-220ENST00000524165 GSTO1P78417 241 aa21.67■■□□□ 1.06
PVT1-220ENST00000524165 LRRC41Q15345 812 aa21.67■■□□□ 1.06
PVT1-220ENST00000524165 FERMT2Q96AC1 680 aa21.67■■□□□ 1.06
PVT1-220ENST00000524165 ADORA1P30542 326 aa21.66■■□□□ 1.06
PVT1-220ENST00000524165 LBX2Q6XYB7 198 aa21.66■■□□□ 1.06
PVT1-220ENST00000524165 METTL16Q86W50 562 aaKnown RBP21.66■■□□□ 1.06
PVT1-220ENST00000524165 PRDM12Q9H4Q4 367 aa21.66■■□□□ 1.06
PVT1-220ENST00000524165 USP17L15C9J2P7 530 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 USP17L13C9JLJ4 530 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 USP17L11C9JVI0 530 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 USP17L18D6R9N7 530 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 USP17L22D6RA61 530 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 USP17L17D6RBQ6 530 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 USP17L19D6RCP7 530 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 USP17L20D6RJB6 530 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 MYCNP04198 464 aaPredicted RBP21.65■■□□□ 1.06
PVT1-220ENST00000524165 USP17L24Q0WX57 530 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 ANO1Q5XXA6 986 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 TEX11Q8IYF3 940 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 C12orf42Q96LP6 360 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 SIL1Q9H173 461 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 ZBTB21Q9ULJ3 1066 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 PHF24Q9UPV7 400 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 SMCHD1A6NHR9 2005 aa21.65■■□□□ 1.06
PVT1-220ENST00000524165 CDK5RAP2Q96SN8 1893 aa21.64■■□□□ 1.06
PVT1-220ENST00000524165 DPP9Q86TI2 863 aa21.64■■□□□ 1.05
PVT1-220ENST00000524165 FOXP4Q8IVH2 680 aaPredicted RBP21.64■■□□□ 1.05
PVT1-220ENST00000524165 NSUN4Q96CB9 384 aaKnown RBP21.64■■□□□ 1.05
PVT1-220ENST00000524165 DNAJC18Q9H819 358 aa21.64■■□□□ 1.05
PVT1-220ENST00000524165 FOCADQ5VW36 1801 aa21.64■■□□□ 1.05
PVT1-220ENST00000524165 IL15P40933 162 aaPredicted RBP21.63■■□□□ 1.05
PVT1-220ENST00000524165 CATSPERGQ6ZRH7 1159 aa21.63■■□□□ 1.05
PVT1-220ENST00000524165 LRFN3Q9BTN0 628 aa21.63■■□□□ 1.05
PVT1-220ENST00000524165 PBX4Q9BYU1 374 aa21.63■■□□□ 1.05
PVT1-220ENST00000524165 CXXC1Q9P0U4 656 aaPredicted RBP21.63■■□□□ 1.05
PVT1-220ENST00000524165 MUC6Q6W4X9 2439 aa21.63■■□□□ 1.05
PVT1-220ENST00000524165 XIRP2A4UGR9 3374 aa21.62■■□□□ 1.05
PVT1-220ENST00000524165 STRNO43815 780 aa21.62■■□□□ 1.05
PVT1-220ENST00000524165 GDF11O95390 407 aa21.62■■□□□ 1.05
PVT1-220ENST00000524165 BMP1P13497 986 aa21.62■■□□□ 1.05
PVT1-220ENST00000524165 ADGRE1Q14246 886 aa21.62■■□□□ 1.05
PVT1-220ENST00000524165 CCDC85BQ15834 202 aaPredicted RBP21.62■■□□□ 1.05
PVT1-220ENST00000524165 SHROOM1Q2M3G4 852 aaPredicted RBP21.62■■□□□ 1.05
PVT1-220ENST00000524165 NECAB3Q96P71 396 aaPredicted RBP21.62■■□□□ 1.05
PVT1-220ENST00000524165 TSPYL2Q9H2G4 693 aaPredicted RBP21.62■■□□□ 1.05
PVT1-220ENST00000524165 TMEM39AQ9NV64 488 aa21.62■■□□□ 1.05
PVT1-220ENST00000524165 BTBD7Q9P203 1132 aa21.62■■□□□ 1.05
PVT1-220ENST00000524165 REV3LO60673 3130 aa21.62■■□□□ 1.05
PVT1-220ENST00000524165 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.61■■□□□ 1.05
PVT1-220ENST00000524165 TRIM34Q9BYJ4 488 aa21.61■■□□□ 1.05
PVT1-220ENST00000524165 ADORA2AP29274 412 aa21.6■■□□□ 1.05
PVT1-220ENST00000524165 PBX2P40425 430 aa21.6■■□□□ 1.05
PVT1-220ENST00000524165 FAM47AQ5JRC9 791 aa21.6■■□□□ 1.05
PVT1-220ENST00000524165 CCDC129Q6ZRS4 1044 aa21.6■■□□□ 1.05
PVT1-220ENST00000524165 CRACR2BQ8N4Y2 399 aaPredicted RBP21.6■■□□□ 1.05
PVT1-220ENST00000524165 SH3RF3Q8TEJ3 882 aaPredicted RBP21.6■■□□□ 1.05
PVT1-220ENST00000524165 TOX2Q96NM4 488 aa21.6■■□□□ 1.05
PVT1-220ENST00000524165 CHD7Q9P2D1 2997 aa21.6■■□□□ 1.05
PVT1-220ENST00000524165 PQBP1O60828 265 aaKnown RBP21.59■■□□□ 1.05
PVT1-220ENST00000524165 IGFBP4P22692 258 aa21.59■■□□□ 1.05
PVT1-220ENST00000524165 AAK1Q2M2I8 961 aa21.59■■□□□ 1.05
PVT1-220ENST00000524165 RASIP1Q5U651 963 aa21.59■■□□□ 1.05
PVT1-220ENST00000524165 CCDC174Q6PII3 467 aa21.59■■□□□ 1.05
PVT1-220ENST00000524165 ANKRD33Q7Z3H0 272 aa21.59■■□□□ 1.05
PVT1-220ENST00000524165 PTPRCP08575 1304 aa21.58■■□□□ 1.05
PVT1-220ENST00000524165 USP14P54578 494 aa21.58■■□□□ 1.05
PVT1-220ENST00000524165 TIMM10P62072 90 aa21.58■■□□□ 1.05
PVT1-220ENST00000524165 FAAP100Q0VG06 881 aa21.58■■□□□ 1.05
PVT1-220ENST00000524165 MVPQ14764 893 aaKnown RBP21.58■■□□□ 1.05
PVT1-220ENST00000524165 SLC44A5Q8NCS7 719 aa21.58■■□□□ 1.05
PVT1-220ENST00000524165 FEZ1Q99689 392 aa21.58■■□□□ 1.05
PVT1-220ENST00000524165 SLC5A4Q9NY91 659 aa21.58■■□□□ 1.05
PVT1-220ENST00000524165 ZNFX1Q9P2E3 1918 aaKnown RBP21.58■■□□□ 1.04
PVT1-220ENST00000524165 GBF1Q92538 1859 aa21.58■■□□□ 1.04
PVT1-220ENST00000524165 SPDYE16A6NNV3 312 aaPredicted RBP21.57■■□□□ 1.04
PVT1-220ENST00000524165 TIMP1P01033 207 aa21.57■■□□□ 1.04
PVT1-220ENST00000524165 VCAM1P19320 739 aa21.57■■□□□ 1.04
PVT1-220ENST00000524165 ZYXQ15942 572 aaKnown RBP21.57■■□□□ 1.04
PVT1-220ENST00000524165 PRAMEF19Q5SWL8 479 aa21.57■■□□□ 1.04
PVT1-220ENST00000524165 RNF180Q86T96 592 aa21.57■■□□□ 1.04
PVT1-220ENST00000524165 NOL10Q9BSC4 688 aaKnown RBP21.57■■□□□ 1.04
PVT1-220ENST00000524165 XPNPEP3Q9NQH7 507 aa21.57■■□□□ 1.04
PVT1-220ENST00000524165 RAI14Q9P0K7 980 aa21.57■■□□□ 1.04
PVT1-220ENST00000524165 HMG20BQ9P0W2 317 aa21.57■■□□□ 1.04
PVT1-220ENST00000524165 A0A1W2PQ45 241 aaPredicted RBP21.56■■□□□ 1.04
PVT1-220ENST00000524165 A0A1W2PQY0 241 aa21.56■■□□□ 1.04
PVT1-220ENST00000524165 GRXCR1A8MXD5 290 aa21.56■■□□□ 1.04
PVT1-220ENST00000524165 DCDC2CA8MYV0 355 aa21.56■■□□□ 1.04
PVT1-220ENST00000524165 PLCG2P16885 1265 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms