RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ANKRD11Q6UB99 2663 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-223ENST00000523636 VPS13AQ96RL7 3174 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 TCF20Q9UGU0 1960 aaKnown RBP6.88□□□□□ -1.31
PABPC1-223ENST00000523636 CDHR2Q9BYE9 1310 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 FAM13AO94988 1023 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 RHOQP17081 205 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 ATP4AP20648 1035 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 MRE11P49959 708 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 ZNF211Q13398 564 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-223ENST00000523636 FAM109BQ6ICB4 259 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-223ENST00000523636 TMED8Q6PL24 325 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-223ENST00000523636 GLYCTKQ8IVS8 523 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 CNBD1Q8NA66 436 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 USP38Q8NB14 1042 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 SH3TC2Q8TF17 1288 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 CDCA5Q96FF9 252 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 CDX2Q99626 313 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-223ENST00000523636 CRISPLD1Q9H336 500 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 EFCC1Q9HA90 598 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 STIM2Q9P246 746 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 CNOT7Q9UIV1 285 aaKnown RBP6.88□□□□□ -1.31
PABPC1-223ENST00000523636 LRFN2Q9ULH4 789 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 NR2E3Q9Y5X4 410 aa6.88□□□□□ -1.31
PABPC1-223ENST00000523636 UNCXA6NJT0 531 aa6.87□□□□□ -1.31
PABPC1-223ENST00000523636 H3BRB1 525 aa6.87□□□□□ -1.31
PABPC1-223ENST00000523636 TNFRSF10BO14763 440 aa6.87□□□□□ -1.31
PABPC1-223ENST00000523636 CANXP27824 592 aaKnown RBP6.87□□□□□ -1.31
PABPC1-223ENST00000523636 MSX1P28360 303 aa6.87□□□□□ -1.31
PABPC1-223ENST00000523636 EIF5P55010 431 aaKnown RBP6.87□□□□□ -1.31
PABPC1-223ENST00000523636 AOC3Q16853 763 aa6.87□□□□□ -1.31
PABPC1-223ENST00000523636 SLC9C1Q4G0N8 1177 aa6.87□□□□□ -1.31
PABPC1-223ENST00000523636 RHPN1Q8TCX5 695 aa6.87□□□□□ -1.31
PABPC1-223ENST00000523636 LRFN3Q9BTN0 628 aa6.87□□□□□ -1.31
PABPC1-223ENST00000523636 SLC12A5Q9H2X9 1139 aa6.87□□□□□ -1.31
PABPC1-223ENST00000523636 TUT1Q9H6E5 874 aaKnown RBP6.87□□□□□ -1.31
PABPC1-223ENST00000523636 ANKIB1Q9P2G1 1089 aa6.87□□□□□ -1.31
PABPC1-223ENST00000523636 YDJCA8MPS7 323 aa6.86□□□□□ -1.31
PABPC1-223ENST00000523636 UBE2Q2LH0YL09 131 aa6.86□□□□□ -1.31
PABPC1-223ENST00000523636 IGF2BP3O00425 579 aaKnown RBP eCLIP6.86□□□□□ -1.311e-9■■■■■ 39.5
PABPC1-223ENST00000523636 F11P03951 625 aa6.86□□□□□ -1.31
PABPC1-223ENST00000523636 LBRQ14739 615 aaKnown RBP6.86□□□□□ -1.31
PABPC1-223ENST00000523636 TBC1D10BQ4KMP7 808 aaPredicted RBP6.86□□□□□ -1.31
PABPC1-223ENST00000523636 IER5Q5VY09 327 aa6.86□□□□□ -1.31
PABPC1-223ENST00000523636 ALKBH2Q6NS38 261 aa6.86□□□□□ -1.31
PABPC1-223ENST00000523636 TDHQ8IZJ6 230 aa6.86□□□□□ -1.31
PABPC1-223ENST00000523636 GMPR2Q9P2T1 348 aaKnown RBP6.86□□□□□ -1.31
PABPC1-223ENST00000523636 DMXL1Q9Y485 3027 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 UBR2Q8IWV8 1755 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 SLC35F4A4IF30 521 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 TGFBR3LH3BV60 316 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 RAD17O75943 681 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 FGD1P98174 961 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 ECM1Q16610 540 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 NLRP8Q86W28 1048 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 NIM1KQ8IY84 436 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 ERO1AQ96HE7 468 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 HTATIP2Q9BUP3 242 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 C11orf16Q9NQ32 467 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 ANO2Q9NQ90 1003 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 ASPMQ8IZT6 3477 aa6.85□□□□□ -1.31
PABPC1-223ENST00000523636 TPRP12270 2363 aaKnown RBP6.84□□□□□ -1.31
PABPC1-223ENST00000523636 SCN9AQ15858 1988 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 MAGEA10P43363 369 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-223ENST00000523636 GJA8P48165 433 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 ST5P78524 1137 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 ARHGAP4P98171 946 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 PTSQ03393 145 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 MTMR3Q13615 1198 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 ARSJQ5FYB0 599 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-223ENST00000523636 PGBD3Q8N328 593 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 MYLIPQ8WY64 445 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 IFT43Q96FT9 208 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 GMCL1Q96IK5 515 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 SUSD3Q96L08 255 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 PRDM16Q9HAZ2 1276 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 KLK14Q9P0G3 267 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 ZNRF3Q9ULT6 936 aa6.84□□□□□ -1.31
PABPC1-223ENST00000523636 SCAF8Q9UPN6 1271 aaKnown RBP6.84□□□□□ -1.31
PABPC1-223ENST00000523636 FLT4P35916 1363 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 RAB3GAP2Q9H2M9 1393 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 FASNP49327 2511 aaKnown RBP6.83□□□□□ -1.32
PABPC1-223ENST00000523636 A0A1W2PNR3 127 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 PPIP5K2O43314 1243 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 SMARCA5O60264 1052 aaPredicted RBP6.83□□□□□ -1.32
PABPC1-223ENST00000523636 KRT37O76014 449 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 CAMTA2O94983 1202 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 MPSTP25325 297 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 CABP4P57796 275 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 SREBF2Q12772 1141 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 CRHR2Q13324 411 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 SAMD5Q5TGI4 173 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 NBPF11Q86T75 865 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 COG3Q96JB2 828 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 SPATA32Q96LK8 384 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 NEUROD4Q9HD90 331 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 GGA3Q9NZ52 723 aa6.83□□□□□ -1.32
PABPC1-223ENST00000523636 BIN2Q9UBW5 565 aaPredicted RBP6.83□□□□□ -1.32
PABPC1-223ENST00000523636 ZMYND8Q9ULU4 1186 aaPredicted RBP6.83□□□□□ -1.32
PABPC1-223ENST00000523636 DUOX1Q9NRD9 1551 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 MYO9BQ13459 2157 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms