RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 DDX4Q9NQI0 724 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-221ENST00000520339 RFX7Q2KHR2 1363 aa11.42□□□□□ -0.58
CTNNA1-221ENST00000520339 DDTLA6NHG4 134 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-221ENST00000520339 CFAP99D6REC4 459 aa11.42□□□□□ -0.58
CTNNA1-221ENST00000520339 BTDP43251 543 aa11.42□□□□□ -0.58
CTNNA1-221ENST00000520339 ATP8B2P98198 1209 aa11.42□□□□□ -0.58
CTNNA1-221ENST00000520339 MECOMQ03112 1051 aa11.42□□□□□ -0.58
CTNNA1-221ENST00000520339 PUS10Q3MIT2 529 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-221ENST00000520339 TBC1D9Q6ZT07 1266 aa11.42□□□□□ -0.58
CTNNA1-221ENST00000520339 SPATA5Q8NB90 893 aa11.42□□□□□ -0.58
CTNNA1-221ENST00000520339 MROH7-TTC4A0A0A0MT08 1334 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 HRO43593 1189 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 SLURP2P0DP57 97 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 ARID4AP29374 1257 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 LACTBP83111 547 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 HNRNPUQ00839 825 aaKnown RBP eCLIP11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 GORABQ5T7V8 394 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 GPAT2Q6NUI2 795 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 PI16Q6UXB8 463 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 ZSCAN29Q8IWY8 852 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 SCYL3Q8IZE3 742 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 SSH3Q8TE77 659 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 NSUN4Q96CB9 384 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 ZNF333Q96JL9 665 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 ARHGAP39Q9C0H5 1083 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 GPR108Q9NPR9 543 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 PTCH2Q9Y6C5 1203 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 PDE4DIPQ5VU43 2346 aa11.41□□□□□ -0.58
CTNNA1-221ENST00000520339 PDHXO00330 501 aa11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 ZBTB7BO15156 539 aaPredicted RBP11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 ACTN4O43707 911 aaKnown RBP11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 MAP4K4O95819 1239 aaPredicted RBP11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 LDHCP07864 332 aa11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 UQCRFS1P1P0C7P4 283 aa11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 PTPRAP18433 802 aa11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 MCAMP43121 646 aa11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 GSTO1P78417 241 aa11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 PICALMQ13492 652 aa11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 ANKK1Q8NFD2 765 aa11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 PICK1Q9NRD5 415 aa11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 CPA4Q9UI42 421 aa11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 NOP58Q9Y2X3 529 aaKnown RBP11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 ZHX2Q9Y6X8 837 aa11.4□□□□□ -0.58
CTNNA1-221ENST00000520339 ADGRA2Q96PE1 1338 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 CTNND1O60716 968 aaKnown RBP11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 GNRH1P01148 92 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 RLBP1P12271 317 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 EN2P19622 333 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 CTGFP29279 349 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 KIF22Q14807 665 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 TNNI3KQ59H18 835 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 MORN1Q5T089 497 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 LCE2DQ5TA82 110 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 LRRN4Q8WUT4 740 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 DBNDD2Q9BQY9 259 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 HMX1Q9NP08 348 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 RAI14Q9P0K7 980 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 AFG3L2Q9Y4W6 797 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 NDUFB9Q9Y6M9 179 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 FPGT-TNNI3KV9GXZ4 949 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 ECM29Q5VYK3 1845 aa11.39□□□□□ -0.59
CTNNA1-221ENST00000520339 ARAP2Q8WZ64 1704 aa11.38□□□□□ -0.59
CTNNA1-221ENST00000520339 A0A0G2JLL6 359 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-221ENST00000520339 SURF6O75683 361 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-221ENST00000520339 PRMT2P55345 433 aa11.38□□□□□ -0.59
CTNNA1-221ENST00000520339 PPP4CP60510 307 aa11.38□□□□□ -0.59
CTNNA1-221ENST00000520339 SLC9C1Q4G0N8 1177 aa11.38□□□□□ -0.59
CTNNA1-221ENST00000520339 FASTKD5Q7L8L6 764 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-221ENST00000520339 PRRT2Q7Z6L0 340 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-221ENST00000520339 NBPF11Q86T75 865 aa11.38□□□□□ -0.59
CTNNA1-221ENST00000520339 CCDC97Q96F63 343 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-221ENST00000520339 TRIM47Q96LD4 638 aa11.38□□□□□ -0.59
CTNNA1-221ENST00000520339 SLC27A5Q9Y2P5 690 aa11.38□□□□□ -0.59
CTNNA1-221ENST00000520339 CYP2C8P10632 490 aa11.37□□□□□ -0.59
CTNNA1-221ENST00000520339 BCRP11274 1271 aa11.37□□□□□ -0.59
CTNNA1-221ENST00000520339 PSMC4P43686 418 aa11.37□□□□□ -0.59
CTNNA1-221ENST00000520339 FTSJ3Q8IY81 847 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-221ENST00000520339 ZNF512BQ96KM6 892 aaPredicted RBP11.37□□□□□ -0.59
CTNNA1-221ENST00000520339 PARK7Q99497 189 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-221ENST00000520339 PRR14Q9BWN1 585 aa11.37□□□□□ -0.59
CTNNA1-221ENST00000520339 OSBPL5Q9H0X9 879 aaPredicted RBP11.37□□□□□ -0.59
CTNNA1-221ENST00000520339 LRP2BPQ9P2M1 347 aa11.37□□□□□ -0.59
CTNNA1-221ENST00000520339 SRRDQ9UH36 339 aa11.37□□□□□ -0.59
CTNNA1-221ENST00000520339 SLC45A1Q9Y2W3 748 aa11.37□□□□□ -0.59
CTNNA1-221ENST00000520339 KIAA0100Q14667 2235 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 CYP2E1P05181 493 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 HOXD10P28358 340 aa11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 OS9Q13438 667 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 RRP1BQ14684 758 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 Q3C1V9 767 aa11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 CCDC158Q5M9N0 1113 aa11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 TTC39AQ5SRH9 613 aa11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 CCDC84Q86UT8 332 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 ITPRIPQ8IWB1 547 aa11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 TEX11Q8IYF3 940 aa11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 SH3TC2Q8TF17 1288 aa11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.36□□□□□ -0.592e-13■■■□□ 15
CTNNA1-221ENST00000520339 PLSCR2Q9NRY7 297 aa11.36□□□□□ -0.59
CTNNA1-221ENST00000520339 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms