RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 ERVK-24P63145 666 aa21.93■■□□□ 1.1
TFF3-204ENST00000518498 MAP3K21Q5TCX8 1036 aa21.93■■□□□ 1.1
TFF3-204ENST00000518498 CERS3Q8IU89 383 aa21.93■■□□□ 1.1
TFF3-204ENST00000518498 GH2P01242 217 aa21.92■■□□□ 1.1
TFF3-204ENST00000518498 PRKAR2AP13861 404 aaKnown RBP21.92■■□□□ 1.1
TFF3-204ENST00000518498 BMP8BP34820 402 aa21.92■■□□□ 1.1
TFF3-204ENST00000518498 MNX1P50219 401 aaPredicted RBP21.92■■□□□ 1.1
TFF3-204ENST00000518498 CLASRPQ8N2M8 674 aaKnown RBP21.92■■□□□ 1.1
TFF3-204ENST00000518498 EAF2Q96CJ1 260 aaPredicted RBP21.92■■□□□ 1.1
TFF3-204ENST00000518498 PAGR1Q9BTK6 254 aa21.92■■□□□ 1.1
TFF3-204ENST00000518498 MAST2Q6P0Q8 1798 aa21.92■■□□□ 1.1
TFF3-204ENST00000518498 TATDN1Q6P1N9 297 aa21.91■■□□□ 1.1
TFF3-204ENST00000518498 PLEKHH3Q7Z736 793 aa21.91■■□□□ 1.1
TFF3-204ENST00000518498 MIGA1Q8NAN2 632 aa21.91■■□□□ 1.1
TFF3-204ENST00000518498 GDF15Q99988 308 aa21.91■■□□□ 1.1
TFF3-204ENST00000518498 LNPKQ9C0E8 428 aa21.91■■□□□ 1.1
TFF3-204ENST00000518498 TLR7Q9NYK1 1049 aaKnown RBP21.91■■□□□ 1.1
TFF3-204ENST00000518498 PLXNB2O15031 1838 aa21.91■■□□□ 1.1
TFF3-204ENST00000518498 ZKSCAN1P17029 563 aaPredicted RBP21.9■■□□□ 1.1
TFF3-204ENST00000518498 RGS2P41220 211 aa21.9■■□□□ 1.1
TFF3-204ENST00000518498 CACNB2Q08289 660 aaPredicted RBP21.9■■□□□ 1.1
TFF3-204ENST00000518498 GPR142Q7Z601 462 aa21.9■■□□□ 1.1
TFF3-204ENST00000518498 TTC6Q86TZ1 520 aa21.9■■□□□ 1.1
TFF3-204ENST00000518498 MAGEB6Q8N7X4 407 aa21.9■■□□□ 1.1
TFF3-204ENST00000518498 USP6NLQ92738 828 aa21.9■■□□□ 1.1
TFF3-204ENST00000518498 PORCNQ9H237 461 aa21.9■■□□□ 1.1
TFF3-204ENST00000518498 CWC22Q9HCG8 908 aaKnown RBP21.9■■□□□ 1.1
TFF3-204ENST00000518498 SERPINB13Q9UIV8 391 aa21.9■■□□□ 1.1
TFF3-204ENST00000518498 ZMYND8Q9ULU4 1186 aaPredicted RBP21.9■■□□□ 1.1
TFF3-204ENST00000518498 CDK5RAP2Q96SN8 1893 aa21.9■■□□□ 1.1
TFF3-204ENST00000518498 USP17L15C9J2P7 530 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 USP17L13C9JLJ4 530 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 USP17L11C9JVI0 530 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 USP17L18D6R9N7 530 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 USP17L22D6RA61 530 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 USP17L17D6RBQ6 530 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 USP17L19D6RCP7 530 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 USP17L20D6RJB6 530 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 SOX1O00570 391 aaPredicted RBP21.89■■□□□ 1.09
TFF3-204ENST00000518498 USP17L24Q0WX57 530 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 MAP3K12Q12852 859 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 MORN1Q5T089 497 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 LRCH3Q96II8 777 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 FEZ1Q99689 392 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 FOCADQ5VW36 1801 aa21.89■■□□□ 1.09
TFF3-204ENST00000518498 MYO5AQ9Y4I1 1855 aaKnown RBP21.88■■□□□ 1.09
TFF3-204ENST00000518498 USP14P54578 494 aa21.88■■□□□ 1.09
TFF3-204ENST00000518498 ZYXQ15942 572 aaKnown RBP21.88■■□□□ 1.09
TFF3-204ENST00000518498 CERKLQ49MI3 558 aaPredicted RBP21.88■■□□□ 1.09
TFF3-204ENST00000518498 TMED8Q6PL24 325 aaPredicted RBP21.88■■□□□ 1.09
TFF3-204ENST00000518498 POTEEQ6S8J3 1075 aa21.88■■□□□ 1.09
TFF3-204ENST00000518498 C12orf42Q96LP6 360 aa21.88■■□□□ 1.09
TFF3-204ENST00000518498 EHD4Q9H223 541 aa21.88■■□□□ 1.09
TFF3-204ENST00000518498 RABGAP1Q9Y3P9 1069 aa21.88■■□□□ 1.09
TFF3-204ENST00000518498 GLRX3O76003 335 aaKnown RBP21.87■■□□□ 1.09
TFF3-204ENST00000518498 SYN1P17600 705 aa21.87■■□□□ 1.09
TFF3-204ENST00000518498 CCNA1P78396 465 aa21.87■■□□□ 1.09
TFF3-204ENST00000518498 RAB3GAP1Q15042 981 aa21.87■■□□□ 1.09
TFF3-204ENST00000518498 CCL14Q16627 93 aa21.87■■□□□ 1.09
TFF3-204ENST00000518498 ABCB5Q2M3G0 1257 aa21.87■■□□□ 1.09
TFF3-204ENST00000518498 CATSPERGQ6ZRH7 1159 aa21.87■■□□□ 1.09
TFF3-204ENST00000518498 EDC3Q96F86 508 aaKnown RBP21.87■■□□□ 1.09
TFF3-204ENST00000518498 ANTXR1Q9H6X2 564 aa21.87■■□□□ 1.09
TFF3-204ENST00000518498 CABP5Q9NP86 173 aa21.87■■□□□ 1.09
TFF3-204ENST00000518498 NDUFB9Q9Y6M9 179 aa21.87■■□□□ 1.09
TFF3-204ENST00000518498 ALPK3Q96L96 1907 aa21.86■■□□□ 1.09
TFF3-204ENST00000518498 SMARCA5O60264 1052 aaPredicted RBP21.86■■□□□ 1.09
TFF3-204ENST00000518498 CCND3P30281 292 aaPredicted RBP21.86■■□□□ 1.09
TFF3-204ENST00000518498 KIAA1683Q9H0B3 1180 aa21.86■■□□□ 1.09
TFF3-204ENST00000518498 IL1RAPL2Q9NP60 686 aa21.86■■□□□ 1.09
TFF3-204ENST00000518498 IFIT2P09913 472 aaKnown RBP21.85■■□□□ 1.09
TFF3-204ENST00000518498 MAP2K5Q13163 448 aa21.85■■□□□ 1.09
TFF3-204ENST00000518498 LHX8Q68G74 356 aa21.85■■□□□ 1.09
TFF3-204ENST00000518498 APBA2Q99767 749 aa21.85■■□□□ 1.09
TFF3-204ENST00000518498 DDX60LQ5H9U9 1706 aaKnown RBP21.85■■□□□ 1.09
TFF3-204ENST00000518498 CNMDO75829 334 aa21.84■■□□□ 1.09
TFF3-204ENST00000518498 WDR78Q5VTH9 848 aa21.84■■□□□ 1.09
TFF3-204ENST00000518498 AACSQ86V21 672 aa21.84■■□□□ 1.09
TFF3-204ENST00000518498 SLC17A8Q8NDX2 589 aa21.84■■□□□ 1.09
TFF3-204ENST00000518498 ACER1Q8TDN7 264 aa21.84■■□□□ 1.09
TFF3-204ENST00000518498 GPATCH3Q96I76 525 aa21.84■■□□□ 1.09
TFF3-204ENST00000518498 SZT2Q5T011 3432 aa21.84■■□□□ 1.09
TFF3-204ENST00000518498 PFASO15067 1338 aa21.83■■□□□ 1.09
TFF3-204ENST00000518498 MYH1P12882 1939 aa21.83■■□□□ 1.09
TFF3-204ENST00000518498 POLR3DP05423 398 aaPredicted RBP21.83■■□□□ 1.09
TFF3-204ENST00000518498 COL6A1P12109 1028 aa21.83■■□□□ 1.09
TFF3-204ENST00000518498 PTPREP23469 700 aa21.83■■□□□ 1.09
TFF3-204ENST00000518498 MAGEA10P43363 369 aaPredicted RBP21.83■■□□□ 1.09
TFF3-204ENST00000518498 PLCD1P51178 756 aa21.83■■□□□ 1.09
TFF3-204ENST00000518498 MFSD14CQ5VZR4 134 aa21.83■■□□□ 1.09
TFF3-204ENST00000518498 MAGEB6P1A0A0J9YX57 407 aa21.82■■□□□ 1.08
TFF3-204ENST00000518498 SLC15A5A6NIM6 579 aa21.82■■□□□ 1.08
TFF3-204ENST00000518498 VCAM1P19320 739 aa21.82■■□□□ 1.08
TFF3-204ENST00000518498 TTF1Q15361 905 aaPredicted RBP21.82■■□□□ 1.08
TFF3-204ENST00000518498 GPR153Q6NV75 609 aa21.82■■□□□ 1.08
TFF3-204ENST00000518498 LBX2Q6XYB7 198 aa21.82■■□□□ 1.08
TFF3-204ENST00000518498 RIOK1Q9BRS2 568 aaKnown RBP21.82■■□□□ 1.08
TFF3-204ENST00000518498 RANBP2P49792 3224 aaKnown RBP21.82■■□□□ 1.08
TFF3-204ENST00000518498 PDE4AP27815 886 aa21.81■■□□□ 1.08
TFF3-204ENST00000518498 SHMT1P34896 483 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms