RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 TFAP4Q01664 338 aa13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 NOL9Q5SY16 702 aaKnown RBP13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 PRAMEF18Q5VWM3 479 aa13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 MIGA2Q7L4E1 593 aa13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 IQCA1Q86XH1 822 aa13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 ZNF784Q8NCA9 323 aaPredicted RBP13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 NKX2-3Q8TAU0 364 aa13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 TTC14Q96N46 770 aa13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 TSPY2A6NKD2 308 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 TSPY3P0CV98 308 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 TSPY8P0CW00 308 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 SLURP2P0DP57 97 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 LIFRP42702 1097 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 COL9A3Q14050 684 aaPredicted RBP13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 RRP1BQ14684 758 aaKnown RBP13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 RRP12Q5JTH9 1297 aaKnown RBP13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 TMEM179Q6ZVK1 233 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 CYB5R4Q7L1T6 521 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 DGKHQ86XP1 1220 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 TMTC2Q8N394 836 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 SMC1BQ8NDV3 1235 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 IGDCC4Q8TDY8 1250 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 IL17RBQ9NRM6 502 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 SYNPO2Q9UMS6 1093 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 PAPPA2Q9BXP8 1791 aa13.47□□□□□ -0.25
ARFGEF1-202ENST00000517955 PASKQ96RG2 1323 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 FAM196BA6NMK8 535 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 PRC1O43663 620 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 ASNSP08243 561 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 AKR1B1P15121 316 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 IREB2P48200 963 aaKnown RBP13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 PSEN1P49768 467 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 EVCP57679 992 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 FSTL1Q12841 308 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 SART3Q15020 963 aaKnown RBP13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 ANKRD1Q15327 319 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 SEC23AQ15436 765 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 ABCB5Q2M3G0 1257 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 SGMS1Q86VZ5 419 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 STK11IPQ8N1F8 1099 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 MKL1Q969V6 931 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 ZSCAN10Q96SZ4 725 aaPredicted RBP13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 KANSL2Q9H9L4 492 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 CABP5Q9NP86 173 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 TOMM22Q9NS69 142 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 MTMR4Q9NYA4 1195 aa13.46□□□□□ -0.25
ARFGEF1-202ENST00000517955 TRPM7Q96QT4 1865 aa13.46□□□□□ -0.26
ARFGEF1-202ENST00000517955 POTEB2H3BUK9 544 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 GUCY1A2P33402 732 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 NEK4P51957 841 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 MAP3K9P80192 1104 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 FAM47AQ5JRC9 791 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 LDLRAD1Q5T700 205 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 RCSD1Q6JBY9 416 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 DLK2Q6UY11 383 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 ARMC9Q7Z3E5 817 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 UBAC1Q9BSL1 405 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 TBC1D2Q9BYX2 928 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 UPF3BQ9BZI7 483 aaKnown RBP13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 PDRG1Q9NUG6 133 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 NYAP2Q9P242 653 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 ZBTB21Q9ULJ3 1066 aa13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 ANGEL1Q9UNK9 670 aaKnown RBP13.45□□□□□ -0.26
ARFGEF1-202ENST00000517955 TRAF5O00463 557 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 SH2B2O14492 632 aaPredicted RBP13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 ST18O60284 1047 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 GH2P01242 217 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 MCM2P49736 904 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 RCAN1P53805 252 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 JAG1P78504 1218 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 ANKRD13AQ8IZ07 590 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 SCYL3Q8IZE3 742 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 ENAHQ8N8S7 591 aaPredicted RBP13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 SNX21Q969T3 373 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 CEP95Q96GE4 821 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 WRNIP1Q96S55 665 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 LY9Q9HBG7 655 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 DOCK1Q14185 1865 aa13.44□□□□□ -0.26
ARFGEF1-202ENST00000517955 ATAD5Q96QE3 1844 aa13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 TNKSO95271 1327 aa13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 ERICH2A1L162 156 aa13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 IFIT3O14879 490 aaKnown RBP13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 TTLL1O95922 423 aa13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 CPA1P15085 419 aa13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 INPP5BP32019 993 aa13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 TOB2Q14106 344 aaPredicted RBP13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 CST9Q5W186 159 aa13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 Q6ZUG5 572 aa13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 SIAH1Q8IUQ4 282 aa13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 WDR18Q9BV38 432 aa13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 GBA2Q9HCG7 927 aaPredicted RBP13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
ARFGEF1-202ENST00000517955 POTEFA5A3E0 1075 aa13.42□□□□□ -0.26
ARFGEF1-202ENST00000517955 MPHOSPH10O00566 681 aaKnown RBP13.42□□□□□ -0.26
ARFGEF1-202ENST00000517955 CELF2O95319 508 aaKnown RBP13.42□□□□□ -0.26
ARFGEF1-202ENST00000517955 GDF11O95390 407 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms