RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 AARSD1Q9BTE6 412 aaKnown RBP3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 COL25A1Q9BXS0 654 aaPredicted RBP3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 TRIM8Q9BZR9 551 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 CNNM2Q9H8M5 875 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 AVENQ9NQS1 362 aaPredicted RBP3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 STRN4Q9NRL3 753 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 ENAMQ9NRM1 1142 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 AASDHPPTQ9NRN7 309 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 CACNA2D2Q9NY47 1150 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 MARK1Q9P0L2 795 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 GMIPQ9P107 970 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 REV1Q9UBZ9 1251 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 SFMBT1Q9UHJ3 866 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 HCN2Q9UL51 889 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 PCDHGC4Q9Y5F7 938 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 SENP3-EIF4A1A0A087X0R7 540 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 GOLGA6CA6NDK9 693 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 GOLGA6BA6NDN3 693 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 DNAJC8O75937 253 aaPredicted RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 SMNDC1O75940 238 aaKnown RBP eCLIP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 GHRHP01286 108 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 THBS1P07996 1170 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 GOLGA6DP0CG33 693 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 MAPTP10636 758 aaKnown RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 ESRRAP11474 423 aaPredicted RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 PLCG1P19174 1290 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 POU3F2P20265 443 aaPredicted RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 ITGA6P23229 1130 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 ZNF143P52747 638 aaPredicted RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 KCNMA1Q12791 1236 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 INPP5AQ14642 412 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 LBRQ14739 615 aaKnown RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 PCBP1Q15365 356 aaKnown RBP eCLIP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 DHCR24Q15392 516 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 FOXD4L6Q3SYB3 417 aaPredicted RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 WIPI1Q5MNZ9 446 aaPredicted RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 C10orf62Q5T681 223 aaPredicted RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 CDCP2Q5VXM1 449 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 CEP135Q66GS9 1140 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 FOXD4L3Q6VB84 417 aaPredicted RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 RAB44Q7Z6P3 723 aaPredicted RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 SPATS2Q86XZ4 545 aaKnown RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 MAGEB6Q8N7X4 407 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 GPBAR1Q8TDU6 330 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 SLC7A3Q8WY07 619 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 NANOS1Q8WY41 292 aaKnown RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 MTFR1LQ9H019 292 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 TRIM39Q9HCM9 518 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 GOLGA6AQ9NYA3 693 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 ZNF180Q9UJW8 692 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 TRHDEQ9UKU6 1024 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 ZNF214Q9UL59 606 aaPredicted RBP3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 PCDHA4Q9UN74 947 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 SOX13Q9UN79 622 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 SNCAIPQ9Y6H5 919 aa3.31□□□□□ -1.88
SCARNA3-201ENST00000517097 TNKSO95271 1327 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 CDC14CA4D256 554 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 GABRDO14764 452 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 BRINP1O60477 761 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 RFPL1O75677 317 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 FOSP01100 380 aaPredicted RBP3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 GSTP1P09211 210 aaKnown RBP3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 ZSCAN20P17040 1043 aaPredicted RBP3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 PPP2R2AP63151 447 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 SUMO1P63165 101 aaKnown RBP3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 UBAP2LQ14157 1087 aaKnown RBP3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 SEPT7Q16181 437 aaKnown RBP3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 GFOD2Q3B7J2 385 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 TRIM61Q5EBN2 209 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 TMEM201Q5SNT2 666 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 ZNF385CQ66K41 422 aaPredicted RBP3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 LRFN4Q6PJG9 635 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 DGKHQ86XP1 1220 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 VWA5B2Q8N398 1253 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 NME8Q8N427 588 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 SLC7A14Q8TBB6 771 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 DDX54Q8TDD1 881 aaKnown RBP3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 WHAMMQ8TF30 809 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 JPH3Q8WXH2 748 aaPredicted RBP3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 PLPPR2Q96GM1 343 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 ACSBG1Q96GR2 724 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 SCYL1Q96KG9 808 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 RHOBTB2Q9BYZ6 727 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 ZC3H12CQ9C0D7 883 aaKnown RBP3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 ADAM19Q9H013 955 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 PUS7LQ9H0K6 701 aaKnown RBP3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 OSGEPQ9NPF4 335 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 LRRC4BQ9NT99 713 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 LRP2BPQ9P2M1 347 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 SUSD2Q9UGT4 822 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 ADAMTS8Q9UP79 889 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 SPEF1Q9Y4P9 236 aa3.3□□□□□ -1.88
SCARNA3-201ENST00000517097 ANKRD34BA5PLL1 514 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 CHURC1-FNTBB4DL54 471 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 PRODHO43272 600 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 BNIP3LO60238 219 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 OPA1O60313 960 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 KPNA6O60684 536 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 ABLIM3O94929 683 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 F2P00734 622 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms