RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 PCGF6Q9BYE7 350 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 GBP3Q9H0R5 595 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 ATXN3LQ9H3M9 355 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 PRDM6Q9NQX0 595 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 MAPRE3Q9UPY8 281 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 MRPS23Q9Y3D9 190 aaKnown RBP5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 A0A1W2PQU0 124 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 SPDYE3A6NKU9 549 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 TMPRSS2O15393 492 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 KCNQ2O43526 872 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 PDE8AO60658 829 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 TP53P04637 393 aaPredicted RBP5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 L1CAMP32004 1257 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 SUMO1P63165 101 aaKnown RBP5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 NFKB2Q00653 900 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 EXOSC10Q01780 885 aaKnown RBP5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 MAP7Q14244 749 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 CHSY3Q70JA7 882 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 NPAS3Q8IXF0 933 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 CCDC144CPQ8IYA2 1237 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 CRACR2BQ8N4Y2 399 aaPredicted RBP5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 DTWD1Q8N5C7 304 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 GALNT11Q8NCW6 608 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 CYB5D2Q8WUJ1 264 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 KISS1RQ969F8 398 aaPredicted RBP5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 EXOC2Q96KP1 924 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 HAUS7Q99871 368 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 ARHGEF4Q9NR80 690 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 INTS7Q9NVH2 962 aaKnown RBP5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 FAM86C1Q9NVL1 165 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 CRIM1Q9NZV1 1036 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 MAGEC2Q9UBF1 373 aaPredicted RBP5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 NXF1Q9UBU9 619 aaKnown RBP5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 TCEAL9Q9UHQ7 104 aa5.13□□□□□ -1.59
RNU6-27P-201ENST00000516146 DNAJC25-GNG10A0A024R161 153 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 A0A087X0B3 334 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 NOP56O00567 594 aaKnown RBP5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 EPHX1P07099 455 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 CAP2P40123 477 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 SRSF11Q05519 484 aaKnown RBP5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 CBX2Q14781 532 aaPredicted RBP5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 DUOXA2Q1HG44 320 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 FOXD4L6Q3SYB3 417 aaPredicted RBP5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 FAM209AQ5JX71 171 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 FOXB2Q5VYV0 432 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 TDRD10Q5VZ19 366 aaKnown RBP5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 FOXD4L3Q6VB84 417 aaPredicted RBP5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 PPFIBP1Q86W92 1011 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 DMRTC2Q8IXT2 367 aaPredicted RBP5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 TMEM192Q8IY95 271 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 LRRN4CLQ8ND94 238 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 EDARADDQ8WWZ3 215 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 PIDD1Q9HB75 910 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 CYP4F12Q9HCS2 524 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 SFMBT1Q9UHJ3 866 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 AP4E1Q9UPM8 1137 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 SUGT1Q9Y2Z0 365 aa5.12□□□□□ -1.59
RNU6-27P-201ENST00000516146 DDX3YO15523 660 aaKnown RBP5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 ADAM11O75078 769 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 PPM1BO75688 479 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 UBOX5O94941 541 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 RAPGEF3O95398 923 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 FGFR1P11362 822 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 AMPD1P23109 780 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 CDKN1CP49918 316 aaPredicted RBP5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 PPP2R2AP63151 447 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 RNF4P78317 190 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 NUTM2GQ5VZR2 741 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 POMZP3Q6PJE2 187 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 NSMFQ6X4W1 530 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 C8orf86Q6ZUL3 223 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 ADAT2Q7Z6V5 191 aaKnown RBP5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 ZNF227Q86WZ6 799 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 DDX42Q86XP3 938 aaKnown RBP eCLIP5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 JAMLQ86YT9 394 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 AHI1Q8N157 1196 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 PPM1KQ8N3J5 372 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 GALNT6Q8NCL4 622 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 ATL2Q8NHH9 583 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 FANCD2OSQ96PS1 177 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 IER2Q9BTL4 223 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 COL25A1Q9BXS0 654 aaPredicted RBP5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 MKRN2Q9H000 416 aaKnown RBP5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 KLHL25Q9H0H3 589 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 SSU72Q9NP77 194 aaKnown RBP5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 WHRNQ9P202 907 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 FAN1Q9Y2M0 1017 aa5.11□□□□□ -1.59
RNU6-27P-201ENST00000516146 GSG1L2A8MUP6 293 aa5.1□□□□□ -1.59
RNU6-27P-201ENST00000516146 C9IYK1 514 aa5.1□□□□□ -1.59
RNU6-27P-201ENST00000516146 TM4SF5O14894 197 aa5.1□□□□□ -1.59
RNU6-27P-201ENST00000516146 RNGTTO60942 597 aaKnown RBP5.1□□□□□ -1.59
RNU6-27P-201ENST00000516146 DLGAP3O95886 979 aa5.1□□□□□ -1.59
RNU6-27P-201ENST00000516146 CST3P01034 146 aaPredicted RBP5.1□□□□□ -1.59
RNU6-27P-201ENST00000516146 APPP05067 770 aa5.1□□□□□ -1.59
RNU6-27P-201ENST00000516146 ITGAVP06756 1048 aa5.1□□□□□ -1.59
RNU6-27P-201ENST00000516146 PABPC1P11940 636 aaKnown RBP5.1□□□□□ -1.59
RNU6-27P-201ENST00000516146 ITGA4P13612 1032 aa5.1□□□□□ -1.59
RNU6-27P-201ENST00000516146 TTLL4Q14679 1199 aa5.1□□□□□ -1.59
RNU6-27P-201ENST00000516146 AXDND1Q5T1B0 1012 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms