RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 Q96M66 194 aa5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 PCDHGB7Q9Y5F8 929 aa5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 SNX11Q9Y5W9 270 aa5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 ST14Q9Y5Y6 855 aa5.96□□□□□ -1.46
HMGB1P29-201ENST00000505659 ZNF76P36508 570 aa5.95□□□□□ -1.46
HMGB1P29-201ENST00000505659 CWF19L2Q2TBE0 894 aaKnown RBP5.95□□□□□ -1.46
HMGB1P29-201ENST00000505659 SEZ6Q53EL9 994 aa5.95□□□□□ -1.46
HMGB1P29-201ENST00000505659 DIEXFQ68CQ4 756 aaKnown RBP5.95□□□□□ -1.46
HMGB1P29-201ENST00000505659 LRRN4CLQ8ND94 238 aa5.95□□□□□ -1.46
HMGB1P29-201ENST00000505659 BAHD1Q8TBE0 780 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P29-201ENST00000505659 LRRC3Q9BY71 257 aa5.95□□□□□ -1.46
HMGB1P29-201ENST00000505659 RC3H2Q9HBD1 1191 aaKnown RBP5.95□□□□□ -1.46
HMGB1P29-201ENST00000505659 CEP131Q9UPN4 1083 aa5.95□□□□□ -1.46
HMGB1P29-201ENST00000505659 PCDHB14Q9Y5E9 798 aa5.95□□□□□ -1.46
HMGB1P29-201ENST00000505659 LRRN2O75325 713 aa5.94□□□□□ -1.46
HMGB1P29-201ENST00000505659 YARSP54577 528 aaKnown RBP5.94□□□□□ -1.46
HMGB1P29-201ENST00000505659 ZP2Q05996 745 aa5.94□□□□□ -1.46
HMGB1P29-201ENST00000505659 ZNF746Q6NUN9 644 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P29-201ENST00000505659 SLFN12Q8IYM2 578 aa5.94□□□□□ -1.46
HMGB1P29-201ENST00000505659 PI4K2BQ8TCG2 481 aa5.94□□□□□ -1.46
HMGB1P29-201ENST00000505659 ASB11Q8WXH4 323 aa5.94□□□□□ -1.46
HMGB1P29-201ENST00000505659 KIF2CQ99661 725 aa5.94□□□□□ -1.46
HMGB1P29-201ENST00000505659 BCL11AQ9H165 835 aa5.94□□□□□ -1.46
HMGB1P29-201ENST00000505659 PAPLNO95428 1278 aa5.93□□□□□ -1.46
HMGB1P29-201ENST00000505659 ITGB5P18084 799 aa5.93□□□□□ -1.46
HMGB1P29-201ENST00000505659 ETV3P41162 512 aa5.93□□□□□ -1.46
HMGB1P29-201ENST00000505659 CLCQ05315 142 aa5.93□□□□□ -1.46
HMGB1P29-201ENST00000505659 APOBRQ0VD83 1088 aa5.93□□□□□ -1.46
HMGB1P29-201ENST00000505659 ARSHQ5FYA8 562 aa5.93□□□□□ -1.46
HMGB1P29-201ENST00000505659 EAF1Q96JC9 268 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P29-201ENST00000505659 ANTXR1Q9H6X2 564 aa5.93□□□□□ -1.46
HMGB1P29-201ENST00000505659 CARS2Q9HA77 564 aaKnown RBP5.93□□□□□ -1.46
HMGB1P29-201ENST00000505659 ZSWIM5Q9P217 1185 aa5.93□□□□□ -1.46
HMGB1P29-201ENST00000505659 UNCXA6NJT0 531 aa5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 CYP7A1P22680 504 aa5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 POLR2BP30876 1174 aaKnown RBP5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 KIR3DL1P43629 444 aa5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 TNNI2P48788 182 aa5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 OVOS1Q6IE37 1185 aa5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 GK5Q6ZS86 529 aa5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 USP48Q86UV5 1035 aa5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 KIAA0825Q8IV33 1275 aa5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 PHACTR4Q8IZ21 702 aa5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 UBE2FQ969M7 185 aa5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 SPON2Q9BUD6 331 aa5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 KRTAP9-2Q9BYQ4 174 aa5.92□□□□□ -1.46
HMGB1P29-201ENST00000505659 SLC22A31A6NKX4 558 aa5.91□□□□□ -1.46
HMGB1P29-201ENST00000505659 MCM4P33991 863 aa5.91□□□□□ -1.46
HMGB1P29-201ENST00000505659 RACK1P63244 317 aaKnown RBP5.91□□□□□ -1.46
HMGB1P29-201ENST00000505659 SLC23A3Q6PIS1 610 aa5.91□□□□□ -1.46
HMGB1P29-201ENST00000505659 DTWD2Q8NBA8 298 aa5.91□□□□□ -1.46
HMGB1P29-201ENST00000505659 RGS22Q8NE09 1264 aa5.91□□□□□ -1.46
HMGB1P29-201ENST00000505659 KREMEN1Q96MU8 473 aa5.91□□□□□ -1.46
HMGB1P29-201ENST00000505659 KIAA1522Q9P206 1035 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P29-201ENST00000505659 ROBO2Q9HCK4 1378 aa5.91□□□□□ -1.46
HMGB1P29-201ENST00000505659 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P29-201ENST00000505659 UBOX5O94941 541 aa5.9□□□□□ -1.46
HMGB1P29-201ENST00000505659 ATE1O95260 518 aa5.9□□□□□ -1.46
HMGB1P29-201ENST00000505659 NKD1Q969G9 470 aa5.9□□□□□ -1.46
HMGB1P29-201ENST00000505659 MRRFQ96E11 262 aaKnown RBP5.9□□□□□ -1.46
HMGB1P29-201ENST00000505659 CCDC74BQ96LY2 380 aa5.9□□□□□ -1.46
HMGB1P29-201ENST00000505659 NT5C1AQ9BXI3 368 aa5.9□□□□□ -1.46
HMGB1P29-201ENST00000505659 DUSP15Q9H1R2 295 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P29-201ENST00000505659 EHMT1Q9H9B1 1298 aa5.9□□□□□ -1.46
HMGB1P29-201ENST00000505659 GMIPQ9P107 970 aa5.9□□□□□ -1.46
HMGB1P29-201ENST00000505659 RNF114Q9Y508 228 aa5.9□□□□□ -1.46
HMGB1P29-201ENST00000505659 CARMIL2Q6F5E8 1435 aa5.9□□□□□ -1.47
HMGB1P29-201ENST00000505659 SHISA3A0PJX4 238 aa5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 PAX4O43316 350 aa5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 ESR1P03372 595 aa5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 RAG1P15918 1043 aa5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 C9orf131Q5VYM1 1079 aa5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 THAP5Q7Z6K1 395 aa5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 METTL16Q86W50 562 aaKnown RBP5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 SLITRK4Q8IW52 837 aa5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 PIWIL2Q8TC59 973 aaKnown RBP5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 RNF141Q8WVD5 230 aa5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 RNF34Q969K3 372 aa5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 COX4I2Q96KJ9 171 aa5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 METTL5Q9NRN9 209 aaKnown RBP5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 C19orf73Q9NVV2 129 aa5.89□□□□□ -1.47
HMGB1P29-201ENST00000505659 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
HMGB1P29-201ENST00000505659 RGS13O14921 159 aa5.88□□□□□ -1.47
HMGB1P29-201ENST00000505659 VAMP1P23763 118 aa5.88□□□□□ -1.47
HMGB1P29-201ENST00000505659 GBP1P32455 592 aa5.88□□□□□ -1.47
HMGB1P29-201ENST00000505659 ATG4CQ96DT6 458 aa5.88□□□□□ -1.47
HMGB1P29-201ENST00000505659 DDX41Q9UJV9 622 aaKnown RBP5.88□□□□□ -1.47
HMGB1P29-201ENST00000505659 CTNND2Q9UQB3 1225 aa5.88□□□□□ -1.47
HMGB1P29-201ENST00000505659 FAM86C2PA6NEL3 165 aa5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 SCAMP3O14828 347 aaKnown RBP5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 SRFP11831 508 aa5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 JUNBP17275 347 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 TPP2P29144 1249 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 HDLBPQ00341 1268 aaKnown RBP5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 MLECQ14165 292 aa5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 GAB4Q2WGN9 574 aa5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 FYB2Q5VWT5 728 aa5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 ATG4DQ86TL0 474 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 CREG2Q8IUH2 290 aa5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 REXO1Q8N1G1 1221 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms