RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
UBE2D3-219ENST00000505207 MAP3K21Q5TCX8 1036 aa13.49□□□□□ -0.25
UBE2D3-219ENST00000505207 CEP85Q6P2H3 762 aa13.49□□□□□ -0.25
UBE2D3-219ENST00000505207 CLASRPQ8N2M8 674 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-219ENST00000505207 TRIB2Q92519 343 aa13.49□□□□□ -0.25
UBE2D3-219ENST00000505207 CRNKL1Q9BZJ0 848 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-219ENST00000505207 KIAA1683Q9H0B3 1180 aa13.49□□□□□ -0.25
UBE2D3-219ENST00000505207 CHMP4BQ9H444 224 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-219ENST00000505207 TXNRD2Q9NNW7 524 aa13.49□□□□□ -0.25
UBE2D3-219ENST00000505207 TLR7Q9NYK1 1049 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-219ENST00000505207 ATAD5Q96QE3 1844 aa13.48□□□□□ -0.25
UBE2D3-219ENST00000505207 MAGEB6P1A0A0J9YX57 407 aa13.48□□□□□ -0.25
UBE2D3-219ENST00000505207 BMP8BP34820 402 aa13.48□□□□□ -0.25
UBE2D3-219ENST00000505207 MFSD14CQ5VZR4 134 aa13.48□□□□□ -0.25
UBE2D3-219ENST00000505207 GPR142Q7Z601 462 aa13.48□□□□□ -0.25
UBE2D3-219ENST00000505207 C7orf61Q8IZ16 206 aa13.48□□□□□ -0.25
UBE2D3-219ENST00000505207 EDC3Q96F86 508 aaKnown RBP13.48□□□□□ -0.25
UBE2D3-219ENST00000505207 APBA2Q99767 749 aa13.48□□□□□ -0.25
UBE2D3-219ENST00000505207 STAP2Q9UGK3 403 aa13.48□□□□□ -0.25
UBE2D3-219ENST00000505207 EXOC6BQ9Y2D4 811 aa13.48□□□□□ -0.25
UBE2D3-219ENST00000505207 IVNS1ABPQ9Y6Y0 642 aa13.48□□□□□ -0.25
UBE2D3-219ENST00000505207 MAST2Q6P0Q8 1798 aa13.48□□□□□ -0.25
UBE2D3-219ENST00000505207 SLC15A5A6NIM6 579 aa13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 IFIT2P09913 472 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 RLBP1P12271 317 aa13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 TRIM32Q13049 653 aa13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 MAP2K5Q13163 448 aa13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 ZYXQ15942 572 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 Q3C1V9 767 aa13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 MORN1Q5T089 497 aa13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 SLC9C2Q5TAH2 1124 aa13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 WDR78Q5VTH9 848 aa13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 CATSPERGQ6ZRH7 1159 aa13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 DIS3LQ8TF46 1054 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 USP6NLQ92738 828 aa13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 KIF1BPQ96EK5 621 aa13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 HOXC10Q9NYD6 342 aa13.47□□□□□ -0.25
UBE2D3-219ENST00000505207 MSCO60682 206 aa13.46□□□□□ -0.25
UBE2D3-219ENST00000505207 CACNB2Q08289 660 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-219ENST00000505207 SHROOM1Q2M3G4 852 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-219ENST00000505207 LBX2Q6XYB7 198 aa13.46□□□□□ -0.25
UBE2D3-219ENST00000505207 RPAP2Q8IXW5 612 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-219ENST00000505207 RHPN1Q8TCX5 695 aa13.46□□□□□ -0.25
UBE2D3-219ENST00000505207 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.46□□□□□ -0.25
UBE2D3-219ENST00000505207 PORCNQ9H237 461 aa13.46□□□□□ -0.25
UBE2D3-219ENST00000505207 ANTXR1Q9H6X2 564 aa13.46□□□□□ -0.25
UBE2D3-219ENST00000505207 MCM9Q9NXL9 1143 aa13.46□□□□□ -0.25
UBE2D3-219ENST00000505207 MPHOSPH10O00566 681 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-219ENST00000505207 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
UBE2D3-219ENST00000505207 VCAM1P19320 739 aa13.45□□□□□ -0.26
UBE2D3-219ENST00000505207 ATP2B2Q01814 1243 aa13.45□□□□□ -0.26
UBE2D3-219ENST00000505207 AMOTL1Q8IY63 956 aa13.45□□□□□ -0.26
UBE2D3-219ENST00000505207 DDRGK1Q96HY6 314 aa13.45□□□□□ -0.26
UBE2D3-219ENST00000505207 GDF15Q99988 308 aa13.45□□□□□ -0.26
UBE2D3-219ENST00000505207 IL1RAPL2Q9NP60 686 aa13.45□□□□□ -0.26
UBE2D3-219ENST00000505207 SWAP70Q9UH65 585 aa13.45□□□□□ -0.26
UBE2D3-219ENST00000505207 STRNO43815 780 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 PEX10O60683 326 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 PDE6AP16499 860 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 PTPREP23469 700 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 SHMT1P34896 483 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 PLCD1P51178 756 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 COG2Q14746 738 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 GPR153Q6NV75 609 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 ACER1Q8TDN7 264 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 RIOK1Q9BRS2 568 aaKnown RBP13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.44□□□□□ -0.261e-12■■■□□ 15.4
UBE2D3-219ENST00000505207 RPAP3Q9H6T3 665 aaPredicted RBP13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 SH2D4AQ9H788 454 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 SLC5A4Q9NY91 659 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 ZMYND8Q9ULU4 1186 aaPredicted RBP13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 DDX19BQ9UMR2 479 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 NDUFB9Q9Y6M9 179 aa13.44□□□□□ -0.26
UBE2D3-219ENST00000505207 GOLIM4O00461 696 aa13.43□□□□□ -0.26
UBE2D3-219ENST00000505207 HOXC6P09630 235 aa13.43□□□□□ -0.26
UBE2D3-219ENST00000505207 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
UBE2D3-219ENST00000505207 CCL14Q16627 93 aa13.43□□□□□ -0.26
UBE2D3-219ENST00000505207 TMEM179Q6ZVK1 233 aa13.43□□□□□ -0.26
UBE2D3-219ENST00000505207 DPP9Q86TI2 863 aa13.43□□□□□ -0.26
UBE2D3-219ENST00000505207 MB21D1Q8N884 522 aa13.43□□□□□ -0.26
UBE2D3-219ENST00000505207 PANK1Q8TE04 598 aa13.43□□□□□ -0.26
UBE2D3-219ENST00000505207 DNAJC2Q99543 621 aaKnown RBP13.43□□□□□ -0.26
UBE2D3-219ENST00000505207 SIPA1L1O43166 1804 aa13.43□□□□□ -0.26
UBE2D3-219ENST00000505207 FOCADQ5VW36 1801 aa13.43□□□□□ -0.26
UBE2D3-219ENST00000505207 ZBED9Q6R2W3 1325 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 ZNF532Q9HCE3 1301 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 APBB1O00213 710 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 CNMDO75829 334 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 CNGA1P29973 690 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 CCND3P30281 292 aaPredicted RBP13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 GABPAQ06546 454 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 SEPT2Q15019 361 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 LHX8Q68G74 356 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 LPAR1Q92633 364 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 CCDC17Q96LX7 622 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 TANGO6Q9C0B7 1094 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 UBE2OQ9C0C9 1292 aaKnown RBP13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 ARHGEF10LQ9HCE6 1279 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 ATP8A2Q9NTI2 1148 aa13.42□□□□□ -0.26
UBE2D3-219ENST00000505207 MYH1P12882 1939 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms