RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 RIN3Q8TB24 985 aa9.45□□□□□ -0.9
UBE2D3-217ENST00000504211 GTF2IRD1Q9UHL9 959 aa9.45□□□□□ -0.9
UBE2D3-217ENST00000504211 RNF112Q9ULX5 631 aa9.45□□□□□ -0.9
UBE2D3-217ENST00000504211 CEP131Q9UPN4 1083 aa9.45□□□□□ -0.9
UBE2D3-217ENST00000504211 LEMD3Q9Y2U8 911 aa9.45□□□□□ -0.9
UBE2D3-217ENST00000504211 TGFB1P01137 390 aa9.44□□□□□ -0.9
UBE2D3-217ENST00000504211 CCNFP41002 786 aa9.44□□□□□ -0.9
UBE2D3-217ENST00000504211 INTS3Q68E01 1043 aaKnown RBP9.44□□□□□ -0.9
UBE2D3-217ENST00000504211 C22orf34Q6ZV56 151 aa9.44□□□□□ -0.9
UBE2D3-217ENST00000504211 PHACTR4Q8IZ21 702 aa9.44□□□□□ -0.9
UBE2D3-217ENST00000504211 COX4I2Q96KJ9 171 aa9.44□□□□□ -0.9
UBE2D3-217ENST00000504211 HEXIM2Q96MH2 286 aaKnown RBP9.44□□□□□ -0.9
UBE2D3-217ENST00000504211 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.44□□□□□ -0.95e-7■■■■□ 24.9
UBE2D3-217ENST00000504211 MKNK2Q9HBH9 465 aa9.44□□□□□ -0.9
UBE2D3-217ENST00000504211 PRDM5Q9NQX1 630 aaPredicted RBP9.44□□□□□ -0.9
UBE2D3-217ENST00000504211 COL17A1Q9UMD9 1497 aaPredicted RBP9.44□□□□□ -0.9
UBE2D3-217ENST00000504211 FOSL1P15407 271 aa9.43□□□□□ -0.9
UBE2D3-217ENST00000504211 DNAJA1P31689 397 aaKnown RBP9.43□□□□□ -0.9
UBE2D3-217ENST00000504211 ETV3P41162 512 aa9.43□□□□□ -0.9
UBE2D3-217ENST00000504211 CRBNQ96SW2 442 aa9.43□□□□□ -0.9
UBE2D3-217ENST00000504211 KIF2CQ99661 725 aa9.43□□□□□ -0.9
UBE2D3-217ENST00000504211 UBOX5O94941 541 aa9.42□□□□□ -0.9
UBE2D3-217ENST00000504211 ACRP10323 421 aa9.42□□□□□ -0.9
UBE2D3-217ENST00000504211 POLR2BP30876 1174 aaKnown RBP9.42□□□□□ -0.9
UBE2D3-217ENST00000504211 C19orf47Q8N9M1 422 aaKnown RBP9.42□□□□□ -0.9
UBE2D3-217ENST00000504211 BAHD1Q8TBE0 780 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-217ENST00000504211 CPLX3Q8WVH0 158 aa9.42□□□□□ -0.9
UBE2D3-217ENST00000504211 SLC9A7Q96T83 725 aa9.42□□□□□ -0.9
UBE2D3-217ENST00000504211 TPX2Q9ULW0 747 aaKnown RBP9.42□□□□□ -0.9
UBE2D3-217ENST00000504211 CNTNAP4Q9C0A0 1308 aa9.41□□□□□ -0.9
UBE2D3-217ENST00000504211 GUCY2CP25092 1073 aa9.41□□□□□ -0.9
UBE2D3-217ENST00000504211 OXCT1P55809 520 aa9.41□□□□□ -0.9
UBE2D3-217ENST00000504211 CDH24Q86UP0 819 aa9.41□□□□□ -0.9
UBE2D3-217ENST00000504211 U3KQE9 123 aa9.41□□□□□ -0.9
UBE2D3-217ENST00000504211 CYP26A1O43174 497 aa9.4□□□□□ -0.9
UBE2D3-217ENST00000504211 SSBP05455 408 aaKnown RBP eCLIP9.4□□□□□ -0.9
UBE2D3-217ENST00000504211 ZNF865P0CJ78 1059 aaPredicted RBP9.4□□□□□ -0.9
UBE2D3-217ENST00000504211 SFRP5Q5T4F7 317 aa9.4□□□□□ -0.9
UBE2D3-217ENST00000504211 RNF141Q8WVD5 230 aa9.4□□□□□ -0.9
UBE2D3-217ENST00000504211 CYP7A1P22680 504 aa9.39□□□□□ -0.91
UBE2D3-217ENST00000504211 GBP1P32455 592 aa9.39□□□□□ -0.91
UBE2D3-217ENST00000504211 MSMPQ1L6U9 139 aa9.39□□□□□ -0.91
UBE2D3-217ENST00000504211 INTS5Q6P9B9 1019 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-217ENST00000504211 RUFY4Q6ZNE9 571 aa9.39□□□□□ -0.91
UBE2D3-217ENST00000504211 FAM169BQ8N8A8 192 aa9.39□□□□□ -0.91
UBE2D3-217ENST00000504211 ASPNQ9BXN1 380 aa9.39□□□□□ -0.91
UBE2D3-217ENST00000504211 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.39□□□□□ -0.91
UBE2D3-217ENST00000504211 COBLO75128 1261 aa9.38□□□□□ -0.91
UBE2D3-217ENST00000504211 HOXA10P31260 410 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-217ENST00000504211 GRIK1P39086 918 aa9.38□□□□□ -0.91
UBE2D3-217ENST00000504211 KIR3DL1P43629 444 aa9.38□□□□□ -0.91
UBE2D3-217ENST00000504211 FAM181AQ8N9Y4 354 aa9.38□□□□□ -0.91
UBE2D3-217ENST00000504211 VWCEQ96DN2 955 aa9.38□□□□□ -0.91
UBE2D3-217ENST00000504211 KREMEN1Q96MU8 473 aa9.38□□□□□ -0.91
UBE2D3-217ENST00000504211 LRRC4CQ9HCJ2 640 aa9.38□□□□□ -0.91
UBE2D3-217ENST00000504211 CEACAM5P06731 702 aa9.37□□□□□ -0.91
UBE2D3-217ENST00000504211 CD97P48960 835 aa9.37□□□□□ -0.91
UBE2D3-217ENST00000504211 CASP7P55210 303 aa9.37□□□□□ -0.91
UBE2D3-217ENST00000504211 ANAPC16Q96DE5 110 aa9.37□□□□□ -0.91
UBE2D3-217ENST00000504211 FBXL18Q96ME1 805 aa9.37□□□□□ -0.91
UBE2D3-217ENST00000504211 TNKS2Q9H2K2 1166 aa9.37□□□□□ -0.91
UBE2D3-217ENST00000504211 ZNF408Q9H9D4 720 aa9.37□□□□□ -0.91
UBE2D3-217ENST00000504211 ZC3H7BQ9UGR2 993 aaKnown RBP9.37□□□□□ -0.91
UBE2D3-217ENST00000504211 CAPN6Q9Y6Q1 641 aa9.37□□□□□ -0.91
UBE2D3-217ENST00000504211 GNAT3A8MTJ3 354 aa9.36□□□□□ -0.91
UBE2D3-217ENST00000504211 KIAA1324LA8MWY0 1029 aaPredicted RBP9.36□□□□□ -0.91
UBE2D3-217ENST00000504211 RNF4P78317 190 aa9.36□□□□□ -0.91
UBE2D3-217ENST00000504211 ZYXQ15942 572 aaKnown RBP9.36□□□□□ -0.91
UBE2D3-217ENST00000504211 UNC5AQ6ZN44 842 aa9.36□□□□□ -0.91
UBE2D3-217ENST00000504211 TTC6Q86TZ1 520 aa9.36□□□□□ -0.91
UBE2D3-217ENST00000504211 TMEM192Q8IY95 271 aa9.36□□□□□ -0.91
UBE2D3-217ENST00000504211 MFSD4AQ8N468 514 aa9.36□□□□□ -0.91
UBE2D3-217ENST00000504211 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
UBE2D3-217ENST00000504211 PRKAG3Q9UGI9 489 aa9.36□□□□□ -0.91
UBE2D3-217ENST00000504211 SLC12A7Q9Y666 1083 aa9.36□□□□□ -0.91
UBE2D3-217ENST00000504211 MRVI1Q9Y6F6 885 aa9.36□□□□□ -0.91
UBE2D3-217ENST00000504211 PRR33A8MZF0 331 aa9.35□□□□□ -0.91
UBE2D3-217ENST00000504211 SF3A1Q15459 793 aaKnown RBP9.35□□□□□ -0.91
UBE2D3-217ENST00000504211 TNNI3KQ59H18 835 aa9.35□□□□□ -0.91
UBE2D3-217ENST00000504211 SPACA3Q8IXA5 215 aa9.35□□□□□ -0.91
UBE2D3-217ENST00000504211 NETO1Q8TDF5 533 aa9.35□□□□□ -0.91
UBE2D3-217ENST00000504211 ARMC5Q96C12 935 aa9.35□□□□□ -0.91
UBE2D3-217ENST00000504211 DHRS1Q96LJ7 313 aa9.35□□□□□ -0.91
UBE2D3-217ENST00000504211 Q96M66 194 aa9.35□□□□□ -0.91
UBE2D3-217ENST00000504211 PLAGL2Q9UPG8 496 aa9.35□□□□□ -0.91
UBE2D3-217ENST00000504211 A0A1W2PQH9 124 aa9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 CLEC3AO75596 197 aa9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 SPINK2P20155 84 aa9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 ETFBP38117 255 aa9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 IFI16Q16666 785 aaKnown RBP9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 NKPD1Q17RQ9 610 aa9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 NBPF12Q5TAG4 269 aaPredicted RBP9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 ARHGAP27Q6ZUM4 889 aa9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 PLD6Q8N2A8 252 aaKnown RBP9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 PIWIL2Q8TC59 973 aaKnown RBP9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 SREK1Q8WXA9 508 aaKnown RBP9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 SLC6A18Q96N87 628 aa9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 SUCOQ9UBS9 1254 aaKnown RBP9.34□□□□□ -0.91
UBE2D3-217ENST00000504211 SMAD7O15105 426 aaKnown RBP9.33□□□□□ -0.92
UBE2D3-217ENST00000504211 MED26O95402 600 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms