RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 C7orf43Q8WVR3 580 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 BAP1Q92560 729 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 EMID1Q96A84 441 aaPredicted RBP9.08□□□□□ -0.96
CDC42-205ENST00000498236 NSUN4Q96CB9 384 aaKnown RBP9.08□□□□□ -0.96
CDC42-205ENST00000498236 TMX3Q96JJ7 454 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 NEK1Q96PY6 1258 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 TRAIPQ9BWF2 469 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 RTFDC1Q9BY42 306 aaPredicted RBP9.08□□□□□ -0.96
CDC42-205ENST00000498236 PDGFDQ9GZP0 370 aaPredicted RBP9.08□□□□□ -0.96
CDC42-205ENST00000498236 COA1Q9GZY4 146 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 CWC22Q9HCG8 908 aaKnown RBP9.08□□□□□ -0.96
CDC42-205ENST00000498236 PDRG1Q9NUG6 133 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 RAI14Q9P0K7 980 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 ABCF2Q9UG63 623 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 LIMCH1Q9UPQ0 1083 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 MAST2Q6P0Q8 1798 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 KIAA1551Q9HCM1 1747 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 KIF13BQ9NQT8 1826 aa9.08□□□□□ -0.96
CDC42-205ENST00000498236 MYH13Q9UKX3 1938 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 SNED1Q8TER0 1413 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 DLEC1Q9Y238 1755 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 MBD4O95243 580 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 AK2P54819 239 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 MECOMQ03112 1051 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 PDE4CQ08493 712 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 ZNF697Q5TEC3 545 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 NAA16Q6N069 864 aaPredicted RBP9.07□□□□□ -0.96
CDC42-205ENST00000498236 GIMAP6Q6P9H5 292 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 DPP8Q6V1X1 898 aaPredicted RBP9.07□□□□□ -0.96
CDC42-205ENST00000498236 BPHLQ86WA6 291 aaPredicted RBP9.07□□□□□ -0.96
CDC42-205ENST00000498236 CERS3Q8IU89 383 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 TBC1D22AQ8WUA7 517 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 ZNF622Q969S3 477 aaKnown RBP eCLIP9.07□□□□□ -0.96
CDC42-205ENST00000498236 ZSCAN31Q96LW9 406 aaPredicted RBP9.07□□□□□ -0.96
CDC42-205ENST00000498236 EYA3Q99504 573 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 RIOK1Q9BRS2 568 aaKnown RBP9.07□□□□□ -0.96
CDC42-205ENST00000498236 MTFR1LQ9H019 292 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 SH2B1Q9NRF2 756 aaPredicted RBP9.07□□□□□ -0.96
CDC42-205ENST00000498236 CHMP5Q9NZZ3 219 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 SUGT1Q9Y2Z0 365 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 TAF6LQ9Y6J9 622 aa9.07□□□□□ -0.96
CDC42-205ENST00000498236 WDR19Q8NEZ3 1342 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 MAGEB6P1A0A0J9YX57 407 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 GSG1L2A8MUP6 293 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 E7EWF7 191 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 PIK3CDO00329 1044 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 ZNF213O14771 459 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 HSP90AA1P07900 732 aaKnown RBP9.06□□□□□ -0.96
CDC42-205ENST00000498236 SKIP12755 728 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 GSTO1P78417 241 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 EXOSC10Q01780 885 aaKnown RBP9.06□□□□□ -0.96
CDC42-205ENST00000498236 AGERQ15109 404 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 LINC01559Q495D7 138 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 LIAT1Q6ZQX7 453 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 STOX1Q6ZVD7 989 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 DHX32Q7L7V1 743 aaKnown RBP9.06□□□□□ -0.96
CDC42-205ENST00000498236 SH3RF1Q7Z6J0 888 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 ADGRA1Q86SQ6 560 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 IFNL3Q8IZI9 196 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 LCORLQ8N3X6 602 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 ZNF511Q8NB15 262 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 AGXT2Q9BYV1 514 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 NACAP1Q9BZK3 213 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 ZC3H12CQ9C0D7 883 aaKnown RBP9.06□□□□□ -0.96
CDC42-205ENST00000498236 ARMT1Q9H993 441 aa9.06□□□□□ -0.96
CDC42-205ENST00000498236 LAMA4Q16363 1823 aa9.05□□□□□ -0.96
CDC42-205ENST00000498236 LDHBP07195 334 aaKnown RBP9.05□□□□□ -0.96
CDC42-205ENST00000498236 LDHCP07864 332 aa9.05□□□□□ -0.96
CDC42-205ENST00000498236 PRDX5P30044 214 aa9.05□□□□□ -0.96
CDC42-205ENST00000498236 CHRNA5P30532 468 aa9.05□□□□□ -0.96
CDC42-205ENST00000498236 TGFB2P61812 414 aa9.05□□□□□ -0.96
CDC42-205ENST00000498236 CHAF1AQ13111 956 aaPredicted RBP9.05□□□□□ -0.96
CDC42-205ENST00000498236 TTLL5Q6EMB2 1281 aa9.05□□□□□ -0.96
CDC42-205ENST00000498236 PODNQ7Z5L7 613 aa9.05□□□□□ -0.96
CDC42-205ENST00000498236 GPR101Q96P66 508 aaPredicted RBP9.05□□□□□ -0.96
CDC42-205ENST00000498236 SLKQ9H2G2 1235 aaPredicted RBP9.05□□□□□ -0.96
CDC42-205ENST00000498236 EPB41L4AQ9HCS5 686 aaPredicted RBP9.05□□□□□ -0.96
CDC42-205ENST00000498236 SLX4Q8IY92 1834 aa9.05□□□□□ -0.96
CDC42-205ENST00000498236 FAM187AA6NFU0 413 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 ZBTB24O43167 697 aaPredicted RBP9.04□□□□□ -0.96
CDC42-205ENST00000498236 APPP05067 770 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 CPA1P15085 419 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 KCNA3P22001 575 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 POLD1P28340 1107 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 EVCP57679 992 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 FKBP1AP62942 108 aaKnown RBP9.04□□□□□ -0.96
CDC42-205ENST00000498236 TOB2Q14106 344 aaPredicted RBP9.04□□□□□ -0.96
CDC42-205ENST00000498236 DZIP1Q86YF9 867 aaKnown RBP9.04□□□□□ -0.96
CDC42-205ENST00000498236 RNF135Q8IUD6 432 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 MB21D2Q8IYB1 491 aaPredicted RBP9.04□□□□□ -0.96
CDC42-205ENST00000498236 TTLL6Q8N841 843 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 MIGA1Q8NAN2 632 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 SUPT20HQ8NEM7 779 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 FOXJ1Q92949 421 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 NAPBQ9H115 298 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 ANAPC4Q9UJX5 808 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 SLC4A4Q9Y6R1 1079 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 TIAM2Q8IVF5 1701 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 CCDC88AQ3V6T2 1871 aa9.04□□□□□ -0.96
CDC42-205ENST00000498236 A0A0G2JLW4 131 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms