RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 RAP1GAPP47736 663 aa5.7□□□□□ -1.5
PSPC1-205ENST00000497722 XPCQ01831 940 aaPredicted RBP5.7□□□□□ -1.5
PSPC1-205ENST00000497722 CAMK2GQ13555 558 aaPredicted RBP5.7□□□□□ -1.5
PSPC1-205ENST00000497722 TMEM201Q5SNT2 666 aa5.7□□□□□ -1.5
PSPC1-205ENST00000497722 ZNF746Q6NUN9 644 aaPredicted RBP5.7□□□□□ -1.5
PSPC1-205ENST00000497722 THAP5Q7Z6K1 395 aa5.7□□□□□ -1.5
PSPC1-205ENST00000497722 COX4I2Q96KJ9 171 aa5.7□□□□□ -1.5
PSPC1-205ENST00000497722 CORINQ9Y5Q5 1042 aa5.7□□□□□ -1.5
PSPC1-205ENST00000497722 SORBS3O60504 671 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 PF4P02776 101 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 LMNB1P20700 586 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 CFPP27918 469 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 KIR3DL1P43629 444 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 TNK2Q07912 1038 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 MESP2Q0VG99 397 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 CCDC27Q2M243 656 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 CDH24Q86UP0 819 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 XAGE3Q8WTP9 111 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 GATAD2BQ8WXI9 593 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 JARID2Q92833 1246 aaPredicted RBP5.69□□□□□ -1.5
PSPC1-205ENST00000497722 Q96M66 194 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 DPH2Q9BQC3 489 aaPredicted RBP5.69□□□□□ -1.5
PSPC1-205ENST00000497722 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
PSPC1-205ENST00000497722 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.68□□□□□ -1.5
PSPC1-205ENST00000497722 TSPAN15O95858 294 aa5.68□□□□□ -1.5
PSPC1-205ENST00000497722 F13A1P00488 732 aa5.68□□□□□ -1.5
PSPC1-205ENST00000497722 PDE4BQ07343 736 aa5.68□□□□□ -1.5
PSPC1-205ENST00000497722 CDKAL1Q5VV42 579 aa5.68□□□□□ -1.5
PSPC1-205ENST00000497722 LCNL1Q6ZST4 164 aa5.68□□□□□ -1.5
PSPC1-205ENST00000497722 TTLL10Q6ZVT0 673 aa5.68□□□□□ -1.5
PSPC1-205ENST00000497722 LRRC56Q8IYG6 542 aaPredicted RBP5.68□□□□□ -1.5
PSPC1-205ENST00000497722 TMEM74Q96NL1 305 aa5.68□□□□□ -1.5
PSPC1-205ENST00000497722 PPP1R16BQ96T49 567 aa5.68□□□□□ -1.5
PSPC1-205ENST00000497722 CARS2Q9HA77 564 aaKnown RBP5.68□□□□□ -1.5
PSPC1-205ENST00000497722 KCNQ5Q9NR82 932 aa5.68□□□□□ -1.5
PSPC1-205ENST00000497722 CEP131Q9UPN4 1083 aa5.68□□□□□ -1.5
PSPC1-205ENST00000497722 POLR3KQ9Y2Y1 108 aaPredicted RBP5.68□□□□□ -1.5
PSPC1-205ENST00000497722 ZNF503-AS2A6NEH8 195 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 LRRC10BA6NIK2 292 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 UPK3BL1B0FP48 263 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 FAM155AB1AL88 458 aaPredicted RBP5.67□□□□□ -1.5
PSPC1-205ENST00000497722 UPK3BL2E5RIL1 263 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 F6X3S4 739 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 H3BS24 57 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 CBX7O95931 251 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 SRFP11831 508 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 FYB2Q5VWT5 728 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 ERMP1Q7Z2K6 904 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 C1QL4Q86Z23 238 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 PIWIL2Q8TC59 973 aaKnown RBP5.67□□□□□ -1.5
PSPC1-205ENST00000497722 DUSP15Q9H1R2 295 aaPredicted RBP5.67□□□□□ -1.5
PSPC1-205ENST00000497722 FAM53CQ9NYF3 392 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 PODXL2Q9NZ53 605 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.67□□□□□ -1.5
PSPC1-205ENST00000497722 JAG2Q9Y219 1238 aa5.67□□□□□ -1.5
PSPC1-205ENST00000497722 ESR1P03372 595 aa5.66□□□□□ -1.5
PSPC1-205ENST00000497722 ZSCAN22P10073 491 aaPredicted RBP5.66□□□□□ -1.5
PSPC1-205ENST00000497722 CYP7A1P22680 504 aa5.66□□□□□ -1.5
PSPC1-205ENST00000497722 GAB4Q2WGN9 574 aa5.66□□□□□ -1.5
PSPC1-205ENST00000497722 SLFN12Q8IYM2 578 aa5.66□□□□□ -1.5
PSPC1-205ENST00000497722 CYB5D2Q8WUJ1 264 aa5.66□□□□□ -1.5
PSPC1-205ENST00000497722 CCDC9Q9Y3X0 531 aaKnown RBP5.66□□□□□ -1.5
PSPC1-205ENST00000497722 WASH4PA8MWX3 477 aa5.65□□□□□ -1.5
PSPC1-205ENST00000497722 DNAJA2O60884 412 aa5.65□□□□□ -1.5
PSPC1-205ENST00000497722 PLCG1P19174 1290 aa5.65□□□□□ -1.5
PSPC1-205ENST00000497722 GDNFP39905 211 aa5.65□□□□□ -1.5
PSPC1-205ENST00000497722 ETV3P41162 512 aa5.65□□□□□ -1.5
PSPC1-205ENST00000497722 MRPL58Q14197 206 aaKnown RBP5.65□□□□□ -1.5
PSPC1-205ENST00000497722 ZSWIM9Q86XI8 627 aa5.65□□□□□ -1.5
PSPC1-205ENST00000497722 UBE2FQ969M7 185 aa5.65□□□□□ -1.5
PSPC1-205ENST00000497722 VTI1BQ9UEU0 232 aa5.65□□□□□ -1.5
PSPC1-205ENST00000497722 GREM1O60565 184 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 GBP2P32456 591 aaPredicted RBP5.64□□□□□ -1.51
PSPC1-205ENST00000497722 PWP1Q13610 501 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 MPP2Q14168 576 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 LDLRAD1Q5T700 205 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 FAM196AQ6ZSG2 479 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 TMPRSS7Q7RTY8 843 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 ANKLE2Q86XL3 938 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 RELL1Q8IUW5 271 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 FBXO27Q8NI29 283 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 VWCEQ96DN2 955 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 LRRC3Q9BY71 257 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 GPR62Q9BZJ7 368 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 COPRSQ9NQ92 184 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 ZSWIM5Q9P217 1185 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 REV1Q9UBZ9 1251 aa5.64□□□□□ -1.51
PSPC1-205ENST00000497722 CHURC1-FNTBB4DL54 471 aa5.63□□□□□ -1.51
PSPC1-205ENST00000497722 HTR3BO95264 441 aa5.63□□□□□ -1.51
PSPC1-205ENST00000497722 AFMP43652 599 aa5.63□□□□□ -1.51
PSPC1-205ENST00000497722 FAM160A1Q05DH4 1040 aa5.63□□□□□ -1.51
PSPC1-205ENST00000497722 FBXL19Q6PCT2 694 aa5.63□□□□□ -1.51
PSPC1-205ENST00000497722 REC114Q7Z4M0 266 aa5.63□□□□□ -1.51
PSPC1-205ENST00000497722 DTWD2Q8NBA8 298 aa5.63□□□□□ -1.51
PSPC1-205ENST00000497722 GOLM1Q8NBJ4 401 aa5.63□□□□□ -1.51
PSPC1-205ENST00000497722 FAM13CQ8NE31 585 aa5.63□□□□□ -1.51
PSPC1-205ENST00000497722 SP110Q9HB58 689 aa5.63□□□□□ -1.51
PSPC1-205ENST00000497722 KBTBD4Q9NVX7 518 aa5.63□□□□□ -1.51
PSPC1-205ENST00000497722 BPNT1O95861 308 aa5.62□□□□□ -1.51
PSPC1-205ENST00000497722 YARSP54577 528 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms