RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 LETMD1Q6P1Q0 360 aa7.42□□□□□ -1.22
VPS36-206ENST00000497149 UNC5AQ6ZN44 842 aa7.42□□□□□ -1.22
VPS36-206ENST00000497149 GIMAP7Q8NHV1 300 aa7.42□□□□□ -1.22
VPS36-206ENST00000497149 RIN3Q8TB24 985 aa7.42□□□□□ -1.22
VPS36-206ENST00000497149 BAHD1Q8TBE0 780 aaPredicted RBP7.42□□□□□ -1.22
VPS36-206ENST00000497149 PPP1R13LQ8WUF5 828 aa7.42□□□□□ -1.22
VPS36-206ENST00000497149 GATA6Q92908 595 aa7.42□□□□□ -1.22
VPS36-206ENST00000497149 DUSP23Q9BVJ7 150 aa7.42□□□□□ -1.22
VPS36-206ENST00000497149 CEP131Q9UPN4 1083 aa7.42□□□□□ -1.22
VPS36-206ENST00000497149 UBOX5O94941 541 aa7.41□□□□□ -1.22
VPS36-206ENST00000497149 H2AFB1P0C5Y9 115 aa7.41□□□□□ -1.22
VPS36-206ENST00000497149 H2AFB2P0C5Z0 115 aa7.41□□□□□ -1.22
VPS36-206ENST00000497149 ADMP35318 185 aa7.41□□□□□ -1.22
VPS36-206ENST00000497149 ZYXQ15942 572 aaKnown RBP7.41□□□□□ -1.22
VPS36-206ENST00000497149 NBPF6Q5VWK0 638 aa7.41□□□□□ -1.22
VPS36-206ENST00000497149 RNF43Q68DV7 783 aa7.41□□□□□ -1.22
VPS36-206ENST00000497149 ZAR1Q86SH2 424 aa7.41□□□□□ -1.22
VPS36-206ENST00000497149 HNRNPLLQ8WVV9 542 aaKnown RBP7.41□□□□□ -1.22
VPS36-206ENST00000497149 NBPF4Q96M43 638 aa7.41□□□□□ -1.22
VPS36-206ENST00000497149 TBC1D32Q96NH3 1257 aa7.41□□□□□ -1.22
VPS36-206ENST00000497149 MIPEPQ99797 713 aa7.41□□□□□ -1.22
VPS36-206ENST00000497149 ACTR10Q9NZ32 417 aa7.41□□□□□ -1.22
VPS36-206ENST00000497149 R3HCC1Q9Y3T6 440 aaKnown RBP7.41□□□□□ -1.22
VPS36-206ENST00000497149 SLC12A7Q9Y666 1083 aa7.41□□□□□ -1.22
VPS36-206ENST00000497149 LEFTY1O75610 366 aa7.4□□□□□ -1.22
VPS36-206ENST00000497149 FAM87AP0C7U9 286 aa7.4□□□□□ -1.22
VPS36-206ENST00000497149 RAB33AQ14088 237 aa7.4□□□□□ -1.22
VPS36-206ENST00000497149 OGFOD3Q6PK18 319 aa7.4□□□□□ -1.22
VPS36-206ENST00000497149 CDH24Q86UP0 819 aa7.4□□□□□ -1.22
VPS36-206ENST00000497149 SHISA5Q8N114 240 aa7.4□□□□□ -1.22
VPS36-206ENST00000497149 Q8N3U1 123 aa7.4□□□□□ -1.22
VPS36-206ENST00000497149 TOP6BLQ8N6T0 577 aa7.4□□□□□ -1.22
VPS36-206ENST00000497149 DNAJB8Q8NHS0 232 aa7.4□□□□□ -1.22
VPS36-206ENST00000497149 PMFBP1Q8TBY8 1022 aa7.4□□□□□ -1.22
VPS36-206ENST00000497149 MFSD14AQ96MC6 490 aa7.4□□□□□ -1.22
VPS36-206ENST00000497149 LTBP3Q9NS15 1303 aa7.4□□□□□ -1.22
VPS36-206ENST00000497149 FAM86C2PA6NEL3 165 aa7.39□□□□□ -1.23
VPS36-206ENST00000497149 EOMESO95936 686 aa7.39□□□□□ -1.23
VPS36-206ENST00000497149 ITGB7P26010 798 aa7.39□□□□□ -1.23
VPS36-206ENST00000497149 RSPO4Q2I0M5 234 aaPredicted RBP7.39□□□□□ -1.23
VPS36-206ENST00000497149 NKAPLQ5M9Q1 402 aa7.39□□□□□ -1.23
VPS36-206ENST00000497149 TMEM192Q8IY95 271 aa7.39□□□□□ -1.23
VPS36-206ENST00000497149 DHRS1Q96LJ7 313 aa7.39□□□□□ -1.23
VPS36-206ENST00000497149 TRIM55Q9BYV6 548 aa7.39□□□□□ -1.23
VPS36-206ENST00000497149 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.39□□□□□ -1.23
VPS36-206ENST00000497149 NFIAQ12857 509 aa7.38□□□□□ -1.23
VPS36-206ENST00000497149 FXNQ16595 210 aa7.38□□□□□ -1.23
VPS36-206ENST00000497149 FAM214BQ7L5A3 538 aa7.38□□□□□ -1.23
VPS36-206ENST00000497149 FBXL6Q8N531 539 aa7.38□□□□□ -1.23
VPS36-206ENST00000497149 SLC6A18Q96N87 628 aa7.38□□□□□ -1.23
VPS36-206ENST00000497149 LNPKQ9C0E8 428 aa7.38□□□□□ -1.23
VPS36-206ENST00000497149 ZNF214Q9UL59 606 aaPredicted RBP7.38□□□□□ -1.23
VPS36-206ENST00000497149 COL17A1Q9UMD9 1497 aaPredicted RBP7.37□□□□□ -1.23
VPS36-206ENST00000497149 CNTNAP4Q9C0A0 1308 aa7.37□□□□□ -1.23
VPS36-206ENST00000497149 FAM170BA6NMN3 283 aa7.37□□□□□ -1.23
VPS36-206ENST00000497149 CLEC3AO75596 197 aa7.37□□□□□ -1.23
VPS36-206ENST00000497149 ETV3P41162 512 aa7.37□□□□□ -1.23
VPS36-206ENST00000497149 LARP1BQ659C4 914 aaKnown RBP7.37□□□□□ -1.23
VPS36-206ENST00000497149 DPH6Q7L8W6 267 aa7.37□□□□□ -1.23
VPS36-206ENST00000497149 CELF2-AS1Q8N7Q2 184 aa7.37□□□□□ -1.23
VPS36-206ENST00000497149 VWCEQ96DN2 955 aa7.37□□□□□ -1.23
VPS36-206ENST00000497149 DBNDD2Q9BQY9 259 aa7.37□□□□□ -1.23
VPS36-206ENST00000497149 PHAXQ9H814 394 aaKnown RBP7.37□□□□□ -1.23
VPS36-206ENST00000497149 U2SURPO15042 1029 aaKnown RBP7.36□□□□□ -1.23
VPS36-206ENST00000497149 GSC2O15499 205 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 IGLV1-40P01703 118 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 F13BP05160 661 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 FSTP19883 344 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 PMS1P54277 932 aaKnown RBP7.36□□□□□ -1.23
VPS36-206ENST00000497149 CYP27A1Q02318 531 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 SERINC3Q13530 473 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 CYP27C1Q4G0S4 372 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 ZNF746Q6NUN9 644 aaPredicted RBP7.36□□□□□ -1.23
VPS36-206ENST00000497149 ZNF765Q7L2R6 523 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 MICAL1Q8TDZ2 1067 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 KREMEN1Q96MU8 473 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 SEMA6BQ9H3T3 888 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 ST7Q9NRC1 585 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 SIRPGQ9P1W8 387 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 SUCOQ9UBS9 1254 aaKnown RBP7.36□□□□□ -1.23
VPS36-206ENST00000497149 TPX2Q9ULW0 747 aaKnown RBP7.36□□□□□ -1.23
VPS36-206ENST00000497149 PCDHB10Q9UN67 800 aa7.36□□□□□ -1.23
VPS36-206ENST00000497149 CYP7A1P22680 504 aa7.35□□□□□ -1.23
VPS36-206ENST00000497149 CHMP4BP1P59074 171 aa7.35□□□□□ -1.23
VPS36-206ENST00000497149 CCDC144BQ3MJ40 725 aa7.35□□□□□ -1.23
VPS36-206ENST00000497149 BBS9Q3SYG4 887 aa7.35□□□□□ -1.23
VPS36-206ENST00000497149 DUSP27Q5VZP5 1158 aa7.35□□□□□ -1.23
VPS36-206ENST00000497149 SLC51AQ86UW1 340 aa7.35□□□□□ -1.23
VPS36-206ENST00000497149 HEXIM2Q96MH2 286 aaKnown RBP7.35□□□□□ -1.23
VPS36-206ENST00000497149 PRDM5Q9NQX1 630 aaPredicted RBP7.35□□□□□ -1.23
VPS36-206ENST00000497149 WDR64B1ANS9 1081 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 IGF2BP3O00425 579 aaKnown RBP eCLIP7.34□□□□□ -1.23
VPS36-206ENST00000497149 DYRK3O43781 588 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 DDAH1O94760 285 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 SLC7A5Q01650 507 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 DDR2Q16832 855 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 GNPTABQ3T906 1256 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 NBPF12Q5TAG4 269 aaPredicted RBP7.34□□□□□ -1.23
VPS36-206ENST00000497149 VHLLQ6RSH7 139 aa7.34□□□□□ -1.23
VPS36-206ENST00000497149 C6orf15Q6UXA7 325 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms