RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 MTMR2Q13614 643 aa14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 RRP12Q5JTH9 1297 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 MFSD6Q6ZSS7 791 aa14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 PROCA1Q8NCQ7 364 aaPredicted RBP14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 PTPN18Q99952 460 aa14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 IL25Q9H293 177 aa14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 SH2D4AQ9H788 454 aa14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 ZCCHC17Q9NP64 241 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 TSPY2A6NKD2 308 aa14.32□□□□□ -0.12
CSNK1E-213ENST00000495232 BTBD19C9JJ37 291 aa14.32□□□□□ -0.12
CSNK1E-213ENST00000495232 FOXN1O15353 648 aa14.32□□□□□ -0.12
CSNK1E-213ENST00000495232 RANBP6O60518 1105 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-213ENST00000495232 PABPC4Q13310 644 aaKnown RBP eCLIP14.32□□□□□ -0.12
CSNK1E-213ENST00000495232 USP17L2Q6R6M4 530 aa14.32□□□□□ -0.12
CSNK1E-213ENST00000495232 ANKRD23Q86SG2 305 aa14.32□□□□□ -0.12
CSNK1E-213ENST00000495232 ZFYVE28Q9HCC9 887 aa14.32□□□□□ -0.12
CSNK1E-213ENST00000495232 ANO2Q9NQ90 1003 aa14.32□□□□□ -0.12
CSNK1E-213ENST00000495232 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
CSNK1E-213ENST00000495232 PDHXO00330 501 aa14.31□□□□□ -0.12
CSNK1E-213ENST00000495232 TBC1D8O95759 1140 aa14.31□□□□□ -0.12
CSNK1E-213ENST00000495232 GUCY1A2P33402 732 aa14.31□□□□□ -0.12
CSNK1E-213ENST00000495232 TFAP4Q01664 338 aa14.31□□□□□ -0.12
CSNK1E-213ENST00000495232 PTH1RQ03431 593 aa14.31□□□□□ -0.12
CSNK1E-213ENST00000495232 TAF1CQ15572 869 aaPredicted RBP14.31□□□□□ -0.12
CSNK1E-213ENST00000495232 ZYXQ15942 572 aaKnown RBP14.31□□□□□ -0.12
CSNK1E-213ENST00000495232 FAM47AQ5JRC9 791 aa14.31□□□□□ -0.12
CSNK1E-213ENST00000495232 AKNAD1Q5T1N1 836 aa14.31□□□□□ -0.12
CSNK1E-213ENST00000495232 FAM43AQ8N2R8 423 aa14.31□□□□□ -0.12
CSNK1E-213ENST00000495232 TSKSQ9UJT2 592 aa14.31□□□□□ -0.12
CSNK1E-213ENST00000495232 ORC4O43929 436 aa14.3□□□□□ -0.12
CSNK1E-213ENST00000495232 SH3D19Q5HYK7 790 aa14.3□□□□□ -0.12
CSNK1E-213ENST00000495232 PPP4R3BQ5MIZ7 849 aa14.3□□□□□ -0.12
CSNK1E-213ENST00000495232 ACER1Q8TDN7 264 aa14.3□□□□□ -0.12
CSNK1E-213ENST00000495232 STAG1Q8WVM7 1258 aa14.3□□□□□ -0.12
CSNK1E-213ENST00000495232 MAP4K1Q92918 833 aa14.3□□□□□ -0.12
CSNK1E-213ENST00000495232 KIAA1683Q9H0B3 1180 aa14.3□□□□□ -0.12
CSNK1E-213ENST00000495232 INCENPQ9NQS7 918 aa14.3□□□□□ -0.12
CSNK1E-213ENST00000495232 PNMA3Q9UL41 463 aa14.3□□□□□ -0.12
CSNK1E-213ENST00000495232 AGTPBP1Q9UPW5 1226 aa14.3□□□□□ -0.12
CSNK1E-213ENST00000495232 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.3□□□□□ -0.12
CSNK1E-213ENST00000495232 PTPRFP10586 1907 aa14.3□□□□□ -0.12
CSNK1E-213ENST00000495232 LAMA4Q16363 1823 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 RAD21O60216 631 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 FGRP09769 529 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 EEF2P13639 858 aaKnown RBP14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 OSBPP22059 807 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 NT5C2P49902 561 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 TRDNQ13061 729 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 MOGSQ13724 837 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 GPAT2Q6NUI2 795 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 NEDD1Q8NHV4 660 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 ESR2Q92731 530 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 PARK7Q99497 189 aaKnown RBP14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 CNNM2Q9H8M5 875 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 SLC45A1Q9Y2W3 748 aa14.29□□□□□ -0.12
CSNK1E-213ENST00000495232 TTLL1O95922 423 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 HSPA8P11142 646 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 LBX1P52954 281 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 IRX3P78415 501 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 CRHR2Q13324 411 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 TREML2Q5T2D2 321 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 CLEC10AQ8IUN9 316 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 TBC1D10CQ8IV04 446 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 SMCR8Q8TEV9 937 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 CEP95Q96GE4 821 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 CFHR5Q9BXR6 569 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 KRT23Q9C075 422 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 LSG1Q9H089 658 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 EMILIN3Q9NT22 766 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 NYAP2Q9P242 653 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 CLIP2Q9UDT6 1046 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 TMX2Q9Y320 296 aa14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 RBM8AQ9Y5S9 174 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-213ENST00000495232 LOC285556D6RIA3 1793 aa14.27□□□□□ -0.12
CSNK1E-213ENST00000495232 PLIN4Q96Q06 1357 aa14.27□□□□□ -0.12
CSNK1E-213ENST00000495232 A0A1W2PRG0 241 aa14.27□□□□□ -0.13
CSNK1E-213ENST00000495232 DGKZQ13574 1117 aa14.27□□□□□ -0.13
CSNK1E-213ENST00000495232 RNF20Q5VTR2 975 aa14.27□□□□□ -0.13
CSNK1E-213ENST00000495232 LPAR1Q92633 364 aa14.27□□□□□ -0.13
CSNK1E-213ENST00000495232 C12orf42Q96LP6 360 aa14.27□□□□□ -0.13
CSNK1E-213ENST00000495232 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.27□□□□□ -0.13
CSNK1E-213ENST00000495232 NBPF3Q9H094 633 aa14.27□□□□□ -0.13
CSNK1E-213ENST00000495232 MTMR4Q9NYA4 1195 aa14.27□□□□□ -0.13
CSNK1E-213ENST00000495232 STX8Q9UNK0 236 aa14.27□□□□□ -0.13
CSNK1E-213ENST00000495232 NEDD4P46934 1319 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 USP17L15C9J2P7 530 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 USP17L13C9JLJ4 530 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 USP17L11C9JVI0 530 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 USP17L18D6R9N7 530 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 USP17L22D6RA61 530 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 USP17L17D6RBQ6 530 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 USP17L19D6RCP7 530 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 USP17L20D6RJB6 530 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 GPR25O00155 361 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 TLR2O60603 784 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 REC8O95072 547 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 CYP21A2P08686 494 aa14.26□□□□□ -0.13
CSNK1E-213ENST00000495232 USP17L24Q0WX57 530 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms