RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 TRIM22Q8IYM9 498 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 WDR66Q8TBY9 1149 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 CCDC88AQ3V6T2 1871 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 CNTNAP5Q8WYK1 1306 aa12□□□□□ -0.49
SAMM50-206ENST00000494795 SRGNP10124 158 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 CCDC144BQ3MJ40 725 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 CATIPQ7Z7H3 387 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 NID2Q14112 1375 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 STK36Q9NRP7 1315 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 IL1R1P14778 569 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 CHRNA5P30532 468 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 CACNB3P54284 484 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 TMTC3Q6ZXV5 915 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 AOPEPQ8N6M6 819 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 DBNDD1Q9H9R9 158 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 DDX4Q9NQI0 724 aaKnown RBP11.99□□□□□ -0.49
SAMM50-206ENST00000494795 ADAMTSL1Q8N6G6 1762 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 PDS5AQ29RF7 1337 aaKnown RBP11.99□□□□□ -0.49
SAMM50-206ENST00000494795 A0A087X0B3 334 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 A0A1W2PQ27 194 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 A0A1W2PQ64 194 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 A0A1W2PQD8 194 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 EIF6P56537 245 aaKnown RBP11.99□□□□□ -0.49
SAMM50-206ENST00000494795 HSP90AA4PQ58FG1 418 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 ATL3Q6DD88 541 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 CCDC39Q9UFE4 941 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 STX8Q9UNK0 236 aa11.99□□□□□ -0.49
SAMM50-206ENST00000494795 CYTH3O43739 400 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 ORC4O43929 436 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 PRR29P0C7W0 189 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 HOXA10P31260 410 aaPredicted RBP11.98□□□□□ -0.49
SAMM50-206ENST00000494795 NAP1L5Q96NT1 182 aaPredicted RBP11.98□□□□□ -0.49
SAMM50-206ENST00000494795 TRIM5Q9C035 493 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 KIAA1468Q9P260 1216 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 ARPP21Q9UBL0 812 aaPredicted RBP11.98□□□□□ -0.49
SAMM50-206ENST00000494795 MYH6P13533 1939 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 RASA1P20936 1047 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 CMA1P23946 247 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 ZNF174Q15697 407 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 SBK1Q52WX2 424 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 METTL16Q86W50 562 aaKnown RBP11.98□□□□□ -0.49
SAMM50-206ENST00000494795 TMTC2Q8N394 836 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 ZNF622Q969S3 477 aaKnown RBP eCLIP11.98□□□□□ -0.49
SAMM50-206ENST00000494795 EPSTI1Q96J88 318 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 MKNK2Q9HBH9 465 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 HPSEQ9Y251 543 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 FLT1P17948 1338 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 FAM205AQ6ZU69 1335 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 KLRG2A4D1S0 409 aaPredicted RBP11.98□□□□□ -0.49
SAMM50-206ENST00000494795 BMP6P22004 513 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 ATP2B4P23634 1241 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 SYKP43405 635 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 ZFPM1Q8IX07 1006 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 TEX11Q8IYF3 940 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 PHF20Q9BVI0 1012 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 FBXO2Q9UK22 296 aaPredicted RBP11.98□□□□□ -0.49
SAMM50-206ENST00000494795 DAGLAQ9Y4D2 1042 aa11.98□□□□□ -0.49
SAMM50-206ENST00000494795 FAM196BA6NMK8 535 aa11.97□□□□□ -0.49
SAMM50-206ENST00000494795 BBOX1O75936 387 aa11.97□□□□□ -0.49
SAMM50-206ENST00000494795 CDC25AP30304 524 aa11.97□□□□□ -0.49
SAMM50-206ENST00000494795 ARID3AQ99856 593 aa11.97□□□□□ -0.49
SAMM50-206ENST00000494795 RNF26Q9BY78 433 aaPredicted RBP11.97□□□□□ -0.49
SAMM50-206ENST00000494795 PDE4BQ07343 736 aa11.97□□□□□ -0.49
SAMM50-206ENST00000494795 RESP18Q5W5W9 173 aa11.97□□□□□ -0.49
SAMM50-206ENST00000494795 SPTY2D1Q68D10 685 aaPredicted RBP11.97□□□□□ -0.49
SAMM50-206ENST00000494795 CCDC186Q7Z3E2 898 aa11.97□□□□□ -0.49
SAMM50-206ENST00000494795 PNMA1Q8ND90 353 aa11.97□□□□□ -0.49
SAMM50-206ENST00000494795 STAMQ92783 540 aa11.97□□□□□ -0.49
SAMM50-206ENST00000494795 CSRNP2Q9H175 543 aa11.97□□□□□ -0.49
SAMM50-206ENST00000494795 CDK8P49336 464 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 ZNF75DP51815 510 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 CDK5RAP2Q96SN8 1893 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 RGS17Q9UGC6 210 aaPredicted RBP11.96□□□□□ -0.49
SAMM50-206ENST00000494795 LAMB1P07942 1786 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 GPR75-ASB3A0A0A6YYF3 556 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 PRPF3O43395 683 aaKnown RBP11.96□□□□□ -0.49
SAMM50-206ENST00000494795 SLC3A2P08195 630 aaKnown RBP11.96□□□□□ -0.49
SAMM50-206ENST00000494795 TSPY3P0CV98 308 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 TSPY8P0CW00 308 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 RBM6P78332 1123 aaKnown RBP11.96□□□□□ -0.49
SAMM50-206ENST00000494795 NFIAQ12857 509 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 STX1AQ16623 288 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 USP17L2Q6R6M4 530 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 PLA2G4DQ86XP0 818 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 TMEM47Q9BQJ4 181 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 MAD2L2Q9UI95 211 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 ATP6V0A2Q9Y487 856 aa11.96□□□□□ -0.49
SAMM50-206ENST00000494795 SNED1Q8TER0 1413 aa11.96□□□□□ -0.5
SAMM50-206ENST00000494795 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.5
SAMM50-206ENST00000494795 POLR2DO15514 142 aaKnown RBP11.96□□□□□ -0.5
SAMM50-206ENST00000494795 ATP1A3P13637 1013 aa11.96□□□□□ -0.5
SAMM50-206ENST00000494795 PPP4CP60510 307 aa11.96□□□□□ -0.5
SAMM50-206ENST00000494795 EN1Q05925 392 aaPredicted RBP11.96□□□□□ -0.5
SAMM50-206ENST00000494795 EZH2Q15910 746 aaKnown RBP11.96□□□□□ -0.5
SAMM50-206ENST00000494795 HS1BP3Q53T59 392 aa11.96□□□□□ -0.5
SAMM50-206ENST00000494795 PIK3AP1Q6ZUJ8 805 aa11.96□□□□□ -0.5
SAMM50-206ENST00000494795 TNFRSF25Q93038 417 aa11.96□□□□□ -0.5
SAMM50-206ENST00000494795 CRAMP1Q96RY5 1269 aa11.96□□□□□ -0.5
SAMM50-206ENST00000494795 FOXP1Q9H334 677 aaPredicted RBP11.96□□□□□ -0.5
SAMM50-206ENST00000494795 KCNH3Q9ULD8 1083 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms