RNA–Protein interactions for RNA: ENST00000494759.1

TRIM16-207, Transcript of tripartite motif containing 16, humanhuman

TSL 3

Gene TRIM16, Length 426 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-207ENST00000494759 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.38□□□□□ -1.23
TRIM16-207ENST00000494759 NEDD4P46934 1319 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 C19orf81C9J6K1 198 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 USP17L10C9JJH3 530 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 CXCL11O14625 94 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 RAD21O60216 631 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 GJA5P36382 358 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 JAG1P78504 1218 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 MAP2K1Q02750 393 aaPredicted RBP7.37□□□□□ -1.23
TRIM16-207ENST00000494759 MTMR2Q13614 643 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 ZYXQ15942 572 aaKnown RBP7.37□□□□□ -1.23
TRIM16-207ENST00000494759 SHROOM1Q2M3G4 852 aaPredicted RBP7.37□□□□□ -1.23
TRIM16-207ENST00000494759 CCDC178Q5BJE1 867 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 FAM47AQ5JRC9 791 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 CREB3L3Q68CJ9 461 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 FASTKD5Q7L8L6 764 aaKnown RBP7.37□□□□□ -1.23
TRIM16-207ENST00000494759 IQCA1Q86XH1 822 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 NEDD1Q8NHV4 660 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 NCOA7Q8NI08 942 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 WDR18Q9BV38 432 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 NBPF3Q9H094 633 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 INCENPQ9NQS7 918 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 KCNH4Q9UQ05 1017 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 AFG3L2Q9Y4W6 797 aa7.37□□□□□ -1.23
TRIM16-207ENST00000494759 PLIN4Q96Q06 1357 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 A0A0G2JLL6 359 aaPredicted RBP7.36□□□□□ -1.23
TRIM16-207ENST00000494759 ERICH2A1L162 156 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 B4E1Z4 1266 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 E7EWF7 191 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 SLC27A2O14975 620 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 EPB41L2O43491 1005 aaKnown RBP7.36□□□□□ -1.23
TRIM16-207ENST00000494759 KDM4AO75164 1064 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 TTLL1O95922 423 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 ALDH1A1P00352 501 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 FGRP09769 529 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 GUCY1A2P33402 732 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 HMGCS2P54868 508 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 BACE1P56817 501 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 PABPC4Q13310 644 aaKnown RBP eCLIP7.36□□□□□ -1.23
TRIM16-207ENST00000494759 KRT32Q14532 448 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 SART3Q15020 963 aaKnown RBP7.36□□□□□ -1.23
TRIM16-207ENST00000494759 NECTIN1Q15223 517 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 USP17L2Q6R6M4 530 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 PRRT2Q7Z6L0 340 aaPredicted RBP7.36□□□□□ -1.23
TRIM16-207ENST00000494759 CLEC10AQ8IUN9 316 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 DNAJC5GQ8N7S2 189 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 PROCA1Q8NCQ7 364 aaPredicted RBP7.36□□□□□ -1.23
TRIM16-207ENST00000494759 ZIC5Q96T25 663 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 UBAC1Q9BSL1 405 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 GOPCQ9HD26 462 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 NYAP2Q9P242 653 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 CLIP2Q9UDT6 1046 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 STX8Q9UNK0 236 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 THSD7BQ9C0I4 1608 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 PHIPQ8WWQ0 1821 aa7.36□□□□□ -1.23
TRIM16-207ENST00000494759 GREB1LQ9C091 1923 aaPredicted RBP7.35□□□□□ -1.23
TRIM16-207ENST00000494759 EEF2P13639 858 aaKnown RBP7.35□□□□□ -1.23
TRIM16-207ENST00000494759 TM4SF4P48230 202 aa7.35□□□□□ -1.23
TRIM16-207ENST00000494759 TAF1CQ15572 869 aaPredicted RBP7.35□□□□□ -1.23
TRIM16-207ENST00000494759 SH3D19Q5HYK7 790 aa7.35□□□□□ -1.23
TRIM16-207ENST00000494759 ANKRD23Q86SG2 305 aa7.35□□□□□ -1.23
TRIM16-207ENST00000494759 IFNL1Q8IU54 200 aa7.35□□□□□ -1.23
TRIM16-207ENST00000494759 ACER1Q8TDN7 264 aa7.35□□□□□ -1.23
TRIM16-207ENST00000494759 BRI3BPQ8WY22 251 aa7.35□□□□□ -1.23
TRIM16-207ENST00000494759 CEP95Q96GE4 821 aa7.35□□□□□ -1.23
TRIM16-207ENST00000494759 MS4A4AQ96JQ5 239 aa7.35□□□□□ -1.23
TRIM16-207ENST00000494759 KIAA1683Q9H0B3 1180 aa7.35□□□□□ -1.23
TRIM16-207ENST00000494759 UPF2Q9HAU5 1272 aaKnown RBP7.35□□□□□ -1.23
TRIM16-207ENST00000494759 MTMR4Q9NYA4 1195 aa7.35□□□□□ -1.23
TRIM16-207ENST00000494759 PNMA3Q9UL41 463 aa7.35□□□□□ -1.23
TRIM16-207ENST00000494759 ISY1Q9ULR0 285 aaKnown RBP7.35□□□□□ -1.23
TRIM16-207ENST00000494759 TACC3Q9Y6A5 838 aa7.35□□□□□ -1.23
TRIM16-207ENST00000494759 PCNTO95613 3336 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 TNKSO95271 1327 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 IGKV6D-41A0A0C4DH26 115 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 A0A1W2PRG0 241 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 TESPA1A2RU30 521 aaPredicted RBP7.34□□□□□ -1.23
TRIM16-207ENST00000494759 BTBD19C9JJ37 291 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 PDHXO00330 501 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 IGF2BP3O00425 579 aaKnown RBP eCLIP7.34□□□□□ -1.23
TRIM16-207ENST00000494759 IFIT3O14879 490 aaKnown RBP7.34□□□□□ -1.23
TRIM16-207ENST00000494759 CA12O43570 354 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 NMT2O60551 498 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 HMGB1P09429 215 aaKnown RBP7.34□□□□□ -1.23
TRIM16-207ENST00000494759 OSBPP22059 807 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 MCM5P33992 734 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 HSPA4P34932 840 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 IRX3P78415 501 aaPredicted RBP7.34□□□□□ -1.23
TRIM16-207ENST00000494759 C8orf34Q49A92 452 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 JMYQ8N9B5 988 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 LPAR1Q92633 364 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 TTC14Q96N46 770 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 NEK1Q96PY6 1258 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 ZSCAN10Q96SZ4 725 aaPredicted RBP7.34□□□□□ -1.23
TRIM16-207ENST00000494759 PARK7Q99497 189 aaKnown RBP7.34□□□□□ -1.23
TRIM16-207ENST00000494759 ZKSCAN3Q9BRR0 538 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.34□□□□□ -1.23
TRIM16-207ENST00000494759 USP26Q9BXU7 913 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 TANGO6Q9C0B7 1094 aa7.34□□□□□ -1.23
TRIM16-207ENST00000494759 VCPKMTQ9H867 229 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms