RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 FAM196BA6NMK8 535 aa16.44■□□□□ 0.22
PDZRN3-210ENST00000492909 SLURP2P0DP57 97 aa16.44■□□□□ 0.22
PDZRN3-210ENST00000492909 AKR1B1P15121 316 aa16.44■□□□□ 0.22
PDZRN3-210ENST00000492909 NUCB2P80303 420 aa16.44■□□□□ 0.22
PDZRN3-210ENST00000492909 RASA3Q14644 834 aa16.44■□□□□ 0.22
PDZRN3-210ENST00000492909 TATDN1Q6P1N9 297 aa16.44■□□□□ 0.22
PDZRN3-210ENST00000492909 NSUN7Q8NE18 718 aaKnown RBP16.44■□□□□ 0.22
PDZRN3-210ENST00000492909 KAT14Q9H8E8 782 aa16.44■□□□□ 0.22
PDZRN3-210ENST00000492909 ADARB2Q9NS39 739 aaKnown RBP16.44■□□□□ 0.22
PDZRN3-210ENST00000492909 STX8Q9UNK0 236 aa16.44■□□□□ 0.22
PDZRN3-210ENST00000492909 ASTN2O75129 1339 aaPredicted RBP16.44■□□□□ 0.22
PDZRN3-210ENST00000492909 CALM1P0DP23 149 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 CALM2P0DP24 149 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 CALM3P0DP25 149 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 HMGN5P82970 282 aaKnown RBP16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 CERKLQ49MI3 558 aaPredicted RBP16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 CCDC144CPQ8IYA2 1237 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 CCDC196A0A1B0GTZ2 297 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 MPHOSPH10O00566 681 aaKnown RBP16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 JAK2O60674 1132 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 DDAH1O94760 285 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 CTDNEP1O95476 244 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 PPP2R5BQ15173 497 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 RTN1Q16799 776 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 ANGEL2Q5VTE6 544 aaKnown RBP16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 CPLX2Q6PUV4 134 aaKnown RBP16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 APOBEC3FQ8IUX4 373 aaKnown RBP16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 FANCBQ8NB91 859 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 SMARCC2Q8TAQ2 1214 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 NUP133Q8WUM0 1156 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 CEP95Q96GE4 821 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 PGAP2Q9UHJ9 254 aa16.43■□□□□ 0.22
PDZRN3-210ENST00000492909 PTPDC1A2A3K4 754 aa16.42■□□□□ 0.22
PDZRN3-210ENST00000492909 TBC1D12O60347 775 aa16.42■□□□□ 0.22
PDZRN3-210ENST00000492909 DTNBO60941 627 aa16.42■□□□□ 0.22
PDZRN3-210ENST00000492909 CDKL5O76039 1030 aa16.42■□□□□ 0.22
PDZRN3-210ENST00000492909 CDC27P30260 824 aa16.42■□□□□ 0.22
PDZRN3-210ENST00000492909 ADD1P35611 737 aaKnown RBP16.42■□□□□ 0.22
PDZRN3-210ENST00000492909 TROAPQ12815 778 aa16.42■□□□□ 0.22
PDZRN3-210ENST00000492909 MYH4Q9Y623 1939 aa16.42■□□□□ 0.22
PDZRN3-210ENST00000492909 POLR2AP24928 1970 aaKnown RBP16.42■□□□□ 0.22
PDZRN3-210ENST00000492909 IGKV6D-41A0A0C4DH26 115 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 PDCP20941 246 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 NOVP48745 357 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 RAB3GAP1Q15042 981 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 PPP4R3BQ5MIZ7 849 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 L1TD1Q5T7N2 865 aaKnown RBP16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 PNMA1Q8ND90 353 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 DEFB129Q9H1M3 183 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 FAM217BQ9NTX9 383 aaPredicted RBP16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 MTMR4Q9NYA4 1195 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 SCAF8Q9UPN6 1271 aaKnown RBP16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 CLEC11AQ9Y240 323 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 KIF3AQ9Y496 699 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 PDIA4P13667 645 aaKnown RBP16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 PKP1Q13835 747 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 USP50Q70EL3 339 aaPredicted RBP16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 PNMA8AQ86V59 439 aaPredicted RBP16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 CDAN1Q8IWY9 1227 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 FAM184AQ8NB25 1140 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 DDX11Q96FC9 970 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 TEPSINQ96N21 525 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 TMEM47Q9BQJ4 181 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 GGA3Q9NZ52 723 aa16.41■□□□□ 0.22
PDZRN3-210ENST00000492909 TOP1P11387 765 aaKnown RBP16.4■□□□□ 0.22
PDZRN3-210ENST00000492909 SYT1P21579 422 aa16.4■□□□□ 0.22
PDZRN3-210ENST00000492909 ABCB5Q2M3G0 1257 aa16.4■□□□□ 0.22
PDZRN3-210ENST00000492909 LARP1BQ659C4 914 aaKnown RBP16.4■□□□□ 0.22
PDZRN3-210ENST00000492909 TMEM179Q6ZVK1 233 aa16.4■□□□□ 0.22
PDZRN3-210ENST00000492909 CTCFLQ8NI51 663 aaPredicted RBP16.4■□□□□ 0.22
PDZRN3-210ENST00000492909 RBM28Q9NW13 759 aaKnown RBP16.4■□□□□ 0.22
PDZRN3-210ENST00000492909 DDX11L8A8MPP1 907 aa16.39■□□□□ 0.21
PDZRN3-210ENST00000492909 TTLL1O95922 423 aa16.39■□□□□ 0.21
PDZRN3-210ENST00000492909 MAP3K10Q02779 954 aa16.39■□□□□ 0.21
PDZRN3-210ENST00000492909 NTRK3Q16288 839 aa16.39■□□□□ 0.21
PDZRN3-210ENST00000492909 MAP1SQ66K74 1059 aaPredicted RBP16.39■□□□□ 0.21
PDZRN3-210ENST00000492909 MIGA2Q7L4E1 593 aa16.39■□□□□ 0.21
PDZRN3-210ENST00000492909 MAP3K14Q99558 947 aa16.39■□□□□ 0.21
PDZRN3-210ENST00000492909 KANSL2Q9H9L4 492 aa16.39■□□□□ 0.21
PDZRN3-210ENST00000492909 CABP5Q9NP86 173 aa16.39■□□□□ 0.21
PDZRN3-210ENST00000492909 MYH6P13533 1939 aa16.39■□□□□ 0.21
PDZRN3-210ENST00000492909 PITPNM2Q9BZ72 1349 aa16.39■□□□□ 0.21
PDZRN3-210ENST00000492909 STX6O43752 255 aa16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 GDF11O95390 407 aa16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 IFNAR1P17181 557 aa16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 KIF5BP33176 963 aa16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 PPP2R3BQ9Y5P8 575 aa16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 WDR33Q9C0J8 1336 aaKnown RBP16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 PPFIA3O75145 1194 aa16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 BRD1O95696 1058 aa16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 DLK2Q6UY11 383 aa16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 LDHDQ86WU2 507 aa16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 CLEC10AQ8IUN9 316 aa16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 ORC3Q9UBD5 711 aaPredicted RBP16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 CLIP2Q9UDT6 1046 aa16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 ZDHHC9Q9Y397 364 aa16.38■□□□□ 0.21
PDZRN3-210ENST00000492909 TRAK2O60296 914 aa16.37■□□□□ 0.21
PDZRN3-210ENST00000492909 TOMM70O94826 608 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms