RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 TNFRSF10CO14798 259 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 RGS13O14921 159 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 CLEC3AO75596 197 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 FAM87AP0C7U9 286 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 ACRP10323 421 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 CAP2P40123 477 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 RAB33AQ14088 237 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 DOC2BQ14184 412 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 CCDC144BQ3MJ40 725 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 GNPTABQ3T906 1256 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 INTS3Q68E01 1043 aaKnown RBP5.99□□□□□ -1.45
CLK1-213ENST00000492793 MFSD14AQ96MC6 490 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 SLC6A18Q96N87 628 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 FAM83CQ9BQN1 747 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 C7orf69Q9H7B7 122 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 TPSG1Q9NRR2 321 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 PCDHB10Q9UN67 800 aa5.99□□□□□ -1.45
CLK1-213ENST00000492793 KLF4O43474 513 aa5.98□□□□□ -1.45
CLK1-213ENST00000492793 TP53P04637 393 aaPredicted RBP5.98□□□□□ -1.45
CLK1-213ENST00000492793 CASP7P55210 303 aa5.98□□□□□ -1.45
CLK1-213ENST00000492793 NBPF6Q5VWK0 638 aa5.98□□□□□ -1.45
CLK1-213ENST00000492793 TDRD10Q5VZ19 366 aaKnown RBP5.98□□□□□ -1.45
CLK1-213ENST00000492793 VHLLQ6RSH7 139 aa5.98□□□□□ -1.45
CLK1-213ENST00000492793 ARHGAP27Q6ZUM4 889 aa5.98□□□□□ -1.45
CLK1-213ENST00000492793 TAB3Q8N5C8 712 aaPredicted RBP5.98□□□□□ -1.45
CLK1-213ENST00000492793 C19orf47Q8N9M1 422 aaKnown RBP5.98□□□□□ -1.45
CLK1-213ENST00000492793 RIN3Q8TB24 985 aa5.98□□□□□ -1.45
CLK1-213ENST00000492793 ZNF512BQ96KM6 892 aaPredicted RBP5.98□□□□□ -1.45
CLK1-213ENST00000492793 DHRS1Q96LJ7 313 aa5.98□□□□□ -1.45
CLK1-213ENST00000492793 NBPF4Q96M43 638 aa5.98□□□□□ -1.45
CLK1-213ENST00000492793 SRPK1Q96SB4 655 aaKnown RBP5.98□□□□□ -1.45
CLK1-213ENST00000492793 SSBP4Q9BWG4 385 aaPredicted RBP5.98□□□□□ -1.45
CLK1-213ENST00000492793 MKRN2Q9H000 416 aaKnown RBP5.98□□□□□ -1.45
CLK1-213ENST00000492793 SIRPGQ9P1W8 387 aa5.98□□□□□ -1.45
CLK1-213ENST00000492793 LEFTY1O75610 366 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 SLITRK5O94991 958 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 CYP7A1P22680 504 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 ETV3P41162 512 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 DDR2Q16832 855 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 KIAA1211LQ6NV74 962 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 C6orf15Q6UXA7 325 aaPredicted RBP5.97□□□□□ -1.45
CLK1-213ENST00000492793 PRR23CQ6ZRP0 262 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 CCDC144CPQ8IYA2 1237 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 CELF2-AS1Q8N7Q2 184 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 MRFAP1L1Q96HT8 127 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 DUSP23Q9BVJ7 150 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.97□□□□□ -1.45
CLK1-213ENST00000492793 PHAXQ9H814 394 aaKnown RBP5.97□□□□□ -1.45
CLK1-213ENST00000492793 C1GALT1Q9NS00 363 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 CEP131Q9UPN4 1083 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 MAPK8IP1Q9UQF2 711 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 LTBP3Q9NS15 1303 aa5.97□□□□□ -1.45
CLK1-213ENST00000492793 B2RBV5 119 aa5.96□□□□□ -1.46
CLK1-213ENST00000492793 K7ELQ4 463 aaPredicted RBP5.96□□□□□ -1.46
CLK1-213ENST00000492793 UBOX5O94941 541 aa5.96□□□□□ -1.46
CLK1-213ENST00000492793 CCNFP41002 786 aa5.96□□□□□ -1.46
CLK1-213ENST00000492793 SLC7A5Q01650 507 aa5.96□□□□□ -1.46
CLK1-213ENST00000492793 NFE2L2Q16236 605 aa5.96□□□□□ -1.46
CLK1-213ENST00000492793 CYP27C1Q4G0S4 372 aa5.96□□□□□ -1.46
CLK1-213ENST00000492793 ZNF746Q6NUN9 644 aaPredicted RBP5.96□□□□□ -1.46
CLK1-213ENST00000492793 SEZ6L2Q6UXD5 910 aa5.96□□□□□ -1.46
CLK1-213ENST00000492793 ZAR1Q86SH2 424 aa5.96□□□□□ -1.46
CLK1-213ENST00000492793 FAM178BQ8IXR5 827 aa5.96□□□□□ -1.46
CLK1-213ENST00000492793 TMEM192Q8IY95 271 aa5.96□□□□□ -1.46
CLK1-213ENST00000492793 PRDM5Q9NQX1 630 aaPredicted RBP5.96□□□□□ -1.46
CLK1-213ENST00000492793 FAM170BA6NMN3 283 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 WDR64B1ANS9 1081 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 GJB6O95452 261 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 CBX7O95931 251 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 ADMP35318 185 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 GSK3AP49840 483 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 IFRD2Q12894 506 aaPredicted RBP5.95□□□□□ -1.46
CLK1-213ENST00000492793 BBS9Q3SYG4 887 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 DUSP27Q5VZP5 1158 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 GPAT2Q6NUI2 795 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 MICAL1Q8TDZ2 1067 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 PPP1R14AQ96A00 147 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 KREMEN1Q96MU8 473 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 PSMG3-AS1Q96PY0 264 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 OSBPL1AQ9BXW6 950 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 ATG3Q9NT62 314 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 SUCOQ9UBS9 1254 aaKnown RBP5.95□□□□□ -1.46
CLK1-213ENST00000492793 GTF2IRD1Q9UHL9 959 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 FBXL21Q9UKT6 434 aa5.95□□□□□ -1.46
CLK1-213ENST00000492793 MSTNO14793 375 aa5.94□□□□□ -1.46
CLK1-213ENST00000492793 PMS1P54277 932 aaKnown RBP5.94□□□□□ -1.46
CLK1-213ENST00000492793 RNF4P78317 190 aa5.94□□□□□ -1.46
CLK1-213ENST00000492793 CYP27A1Q02318 531 aa5.94□□□□□ -1.46
CLK1-213ENST00000492793 NCAPHQ15003 741 aa5.94□□□□□ -1.46
CLK1-213ENST00000492793 SFRP5Q5T4F7 317 aa5.94□□□□□ -1.46
CLK1-213ENST00000492793 RNF43Q68DV7 783 aa5.94□□□□□ -1.46
CLK1-213ENST00000492793 OGFOD3Q6PK18 319 aa5.94□□□□□ -1.46
CLK1-213ENST00000492793 ZNF765Q7L2R6 523 aa5.94□□□□□ -1.46
CLK1-213ENST00000492793 ADAT2Q7Z6V5 191 aaKnown RBP5.94□□□□□ -1.46
CLK1-213ENST00000492793 PPP1R13LQ8WUF5 828 aa5.94□□□□□ -1.46
CLK1-213ENST00000492793 DEPDC7Q96QD5 511 aa5.94□□□□□ -1.46
CLK1-213ENST00000492793 LRRC4CQ9HCJ2 640 aa5.94□□□□□ -1.46
CLK1-213ENST00000492793 ZNF214Q9UL59 606 aaPredicted RBP5.94□□□□□ -1.46
CLK1-213ENST00000492793 CDK11AQ9UQ88 783 aaPredicted RBP5.94□□□□□ -1.46
CLK1-213ENST00000492793 GNAT3A8MTJ3 354 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms