RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 CYP2D7A0A087X1C5 515 aa18.09■□□□□ 0.49
USP39-217ENST00000491659 GPAA1O43292 621 aa18.09■□□□□ 0.49
USP39-217ENST00000491659 SEPT2Q15019 361 aa18.09■□□□□ 0.49
USP39-217ENST00000491659 CTR9Q6PD62 1173 aa18.09■□□□□ 0.49
USP39-217ENST00000491659 TMEM179Q6ZVK1 233 aa18.09■□□□□ 0.49
USP39-217ENST00000491659 KIAA1683Q9H0B3 1180 aa18.09■□□□□ 0.49
USP39-217ENST00000491659 M0R2C6 588 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 GUCY1A2P33402 732 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 CDK8P49336 464 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 PRKCZQ05513 592 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 GIMAP6Q6P9H5 292 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 C16orf86Q6ZW13 317 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 SMC5Q8IY18 1101 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 ACER1Q8TDN7 264 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 SH3TC2Q8TF17 1288 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 GTF3C2Q8WUA4 911 aaPredicted RBP18.08■□□□□ 0.48
USP39-217ENST00000491659 COA7Q96BR5 231 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 CCDC17Q96LX7 622 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 TMEM106CQ9BVX2 250 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 STAP2Q9UGK3 403 aa18.08■□□□□ 0.48
USP39-217ENST00000491659 GSG1L2A8MUP6 293 aa18.07■□□□□ 0.48
USP39-217ENST00000491659 AKR1B1P15121 316 aa18.07■□□□□ 0.48
USP39-217ENST00000491659 TDO2P48775 406 aa18.07■□□□□ 0.48
USP39-217ENST00000491659 PDE1AP54750 535 aa18.07■□□□□ 0.48
USP39-217ENST00000491659 HERVK_113P62684 666 aa18.07■□□□□ 0.48
USP39-217ENST00000491659 B4GALNT3Q6L9W6 998 aa18.07■□□□□ 0.48
USP39-217ENST00000491659 P2RX7Q99572 595 aaKnown RBP18.07■□□□□ 0.48
USP39-217ENST00000491659 LNPKQ9C0E8 428 aa18.07■□□□□ 0.48
USP39-217ENST00000491659 GREB1LQ9C091 1923 aaPredicted RBP18.06■□□□□ 0.48
USP39-217ENST00000491659 USP17L15C9J2P7 530 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 USP17L13C9JLJ4 530 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 USP17L11C9JVI0 530 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 USP17L18D6R9N7 530 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 USP17L22D6RA61 530 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 USP17L17D6RBQ6 530 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 USP17L19D6RCP7 530 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 USP17L20D6RJB6 530 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 APPP05067 770 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 VCAM1P19320 739 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 GRK4P32298 578 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 ICA1Q05084 483 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 USP17L24Q0WX57 530 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 SBK1Q52WX2 424 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 EVI5LQ96CN4 794 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 SH2D4AQ9H788 454 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 ARHGEF10LQ9HCE6 1279 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 MORF4L1Q9UBU8 362 aa18.06■□□□□ 0.48
USP39-217ENST00000491659 ROBO3Q96MS0 1386 aa18.05■□□□□ 0.48
USP39-217ENST00000491659 MINDY4BA8MYZ0 360 aa18.05■□□□□ 0.48
USP39-217ENST00000491659 SMIM22K7EJ46 135 aa18.05■□□□□ 0.48
USP39-217ENST00000491659 ZMYM1Q5SVZ6 1142 aa18.05■□□□□ 0.48
USP39-217ENST00000491659 SLAIN1Q8ND83 568 aa18.05■□□□□ 0.48
USP39-217ENST00000491659 SEC62Q99442 399 aaKnown RBP18.05■□□□□ 0.48
USP39-217ENST00000491659 NACAP1Q9BZK3 213 aa18.05■□□□□ 0.48
USP39-217ENST00000491659 EPB41L4AQ9HCS5 686 aaPredicted RBP18.05■□□□□ 0.48
USP39-217ENST00000491659 GABRQQ9UN88 632 aa18.05■□□□□ 0.48
USP39-217ENST00000491659 POTEFA5A3E0 1075 aa18.04■□□□□ 0.48
USP39-217ENST00000491659 MYCP01106 439 aaPredicted RBP18.04■□□□□ 0.48
USP39-217ENST00000491659 FLT3LGP49771 235 aa18.04■□□□□ 0.48
USP39-217ENST00000491659 CHD1LQ86WJ1 897 aa18.04■□□□□ 0.48
USP39-217ENST00000491659 GPRC5AQ8NFJ5 357 aa18.04■□□□□ 0.48
USP39-217ENST00000491659 PAGR1Q9BTK6 254 aa18.04■□□□□ 0.48
USP39-217ENST00000491659 RPAP3Q9H6T3 665 aaPredicted RBP18.04■□□□□ 0.48
USP39-217ENST00000491659 BIN2Q9UBW5 565 aaPredicted RBP18.04■□□□□ 0.48
USP39-217ENST00000491659 DOCK3Q8IZD9 2030 aa18.04■□□□□ 0.48
USP39-217ENST00000491659 A0A1W2PRG0 241 aa18.03■□□□□ 0.48
USP39-217ENST00000491659 PATL2C9JE40 543 aaKnown RBP18.03■□□□□ 0.48
USP39-217ENST00000491659 IGHDP01880 384 aa18.03■□□□□ 0.48
USP39-217ENST00000491659 UBXN2AP68543 259 aa18.03■□□□□ 0.48
USP39-217ENST00000491659 CATSPERGQ6ZRH7 1159 aa18.03■□□□□ 0.48
USP39-217ENST00000491659 CLEC10AQ8IUN9 316 aa18.03■□□□□ 0.48
USP39-217ENST00000491659 CCAR1Q8IX12 1150 aaKnown RBP18.03■□□□□ 0.48
USP39-217ENST00000491659 A0A0G2JMZ2 1700 aa18.03■□□□□ 0.48
USP39-217ENST00000491659 PLXNB2O15031 1838 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 ADCY3O60266 1144 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 ERVK-9P63128 1117 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 ERVK-24P63145 666 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 NUCB1Q02818 461 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 IRF5Q13568 498 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 IFNL3Q8IZI9 196 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 STK11IPQ8N1F8 1099 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 LPAR1Q92633 364 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 NAPBQ9H115 298 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 KANSL2Q9H9L4 492 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 MKNK2Q9HBH9 465 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 ZNF287Q9HBT7 754 aa18.02■□□□□ 0.48
USP39-217ENST00000491659 PARP14Q460N5 1801 aa18.02■□□□□ 0.47
USP39-217ENST00000491659 MYH4Q9Y623 1939 aa18.02■□□□□ 0.47
USP39-217ENST00000491659 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
USP39-217ENST00000491659 MAPK4P31152 587 aa18.01■□□□□ 0.47
USP39-217ENST00000491659 ATP2B2Q01814 1243 aa18.01■□□□□ 0.47
USP39-217ENST00000491659 PXYLP1Q8TE99 480 aa18.01■□□□□ 0.47
USP39-217ENST00000491659 TANGO6Q9C0B7 1094 aa18.01■□□□□ 0.47
USP39-217ENST00000491659 CWC22Q9HCG8 908 aaKnown RBP18.01■□□□□ 0.47
USP39-217ENST00000491659 TXNRD2Q9NNW7 524 aa18.01■□□□□ 0.47
USP39-217ENST00000491659 RBPJLQ9UBG7 517 aa18.01■□□□□ 0.47
USP39-217ENST00000491659 RABGAP1Q9Y3P9 1069 aa18.01■□□□□ 0.47
USP39-217ENST00000491659 KIAA0100Q14667 2235 aaKnown RBP18■□□□□ 0.47
USP39-217ENST00000491659 PEX10O60683 326 aa18■□□□□ 0.47
USP39-217ENST00000491659 SLC3A2P08195 630 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms