RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 UBE3CQ15386 1083 aa11.54□□□□□ -0.56
CCT3-213ENST00000489870 ABCB5Q2M3G0 1257 aa11.54□□□□□ -0.56
CCT3-213ENST00000489870 CCAR1Q8IX12 1150 aaKnown RBP11.54□□□□□ -0.56
CCT3-213ENST00000489870 SHISA4Q96DD7 197 aa11.54□□□□□ -0.56
CCT3-213ENST00000489870 DDRGK1Q96HY6 314 aa11.54□□□□□ -0.56
CCT3-213ENST00000489870 EMILIN3Q9NT22 766 aa11.54□□□□□ -0.56
CCT3-213ENST00000489870 TLR7Q9NYK1 1049 aaKnown RBP11.54□□□□□ -0.56
CCT3-213ENST00000489870 RBPJLQ9UBG7 517 aa11.54□□□□□ -0.56
CCT3-213ENST00000489870 PITPNM1O00562 1244 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 FARP2O94887 1054 aaPredicted RBP11.53□□□□□ -0.56
CCT3-213ENST00000489870 GH2P01242 217 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 POLR3DP05423 398 aaPredicted RBP11.53□□□□□ -0.56
CCT3-213ENST00000489870 PDE6AP16499 860 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 ERVK-9P63128 1117 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 ERVK-24P63145 666 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 DYNLL1P63167 89 aaKnown RBP11.53□□□□□ -0.56
CCT3-213ENST00000489870 MAP3K21Q5TCX8 1036 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 CATSPERGQ6ZRH7 1159 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 NECAB2Q7Z6G3 386 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 AMOTL1Q8IY63 956 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 MB21D1Q8N884 522 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 USP6NLQ92738 828 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 DPF3Q92784 378 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 UNC93B1Q9H1C4 597 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 ANTXR1Q9H6X2 564 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 SH2D4AQ9H788 454 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 SIPA1L1O43166 1804 aa11.53□□□□□ -0.56
CCT3-213ENST00000489870 ZSWIM8A7E2V4 1837 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 TCRBV5S4A2TA0A5A2 114 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 HOXC6P09630 235 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 SLURP2P0DP57 97 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 RGS2P41220 211 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 LRRFIP1Q32MZ4 808 aaKnown RBP11.52□□□□□ -0.57
CCT3-213ENST00000489870 GIMAP6Q6P9H5 292 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 TMEM179Q6ZVK1 233 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 TICAM2Q86XR7 235 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 SIRT2Q8IXJ6 389 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 MIGA1Q8NAN2 632 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 LPAR1Q92633 364 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 HAUS7Q99871 368 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 LRRCC1Q9C099 1032 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 IL1RAPL2Q9NP60 686 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 PAG1Q9NWQ8 432 aa11.52□□□□□ -0.57
CCT3-213ENST00000489870 SLC15A5A6NIM6 579 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 MSCO60682 206 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 ELNP15502 786 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 SHMT1P34896 483 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 JAG1P78504 1218 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 COG2Q14746 738 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 MORN1Q5T089 497 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 PLEKHH3Q7Z736 793 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 CCDC84Q86UT8 332 aaPredicted RBP11.51□□□□□ -0.57
CCT3-213ENST00000489870 DEFB118Q96PH6 123 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.51□□□□□ -0.57
CCT3-213ENST00000489870 DCP1AQ9NPI6 582 aaPredicted RBP11.51□□□□□ -0.57
CCT3-213ENST00000489870 MCM9Q9NXL9 1143 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 SAP30BPQ9UHR5 308 aaKnown RBP11.51□□□□□ -0.57
CCT3-213ENST00000489870 OGDHLQ9ULD0 1010 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 COG6Q9Y2V7 657 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 ZNF532Q9HCE3 1301 aa11.51□□□□□ -0.57
CCT3-213ENST00000489870 H0YGN5 161 aa11.5□□□□□ -0.57
CCT3-213ENST00000489870 GOLIM4O00461 696 aa11.5□□□□□ -0.57
CCT3-213ENST00000489870 GDF11O95390 407 aa11.5□□□□□ -0.57
CCT3-213ENST00000489870 ZFYP08048 801 aaPredicted RBP11.5□□□□□ -0.57
CCT3-213ENST00000489870 ADD2P35612 726 aa11.5□□□□□ -0.57
CCT3-213ENST00000489870 PLCD1P51178 756 aa11.5□□□□□ -0.57
CCT3-213ENST00000489870 SHCBP1Q8NEM2 672 aa11.5□□□□□ -0.57
CCT3-213ENST00000489870 EDC3Q96F86 508 aaKnown RBP11.5□□□□□ -0.57
CCT3-213ENST00000489870 FEZ1Q99689 392 aa11.5□□□□□ -0.57
CCT3-213ENST00000489870 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
CCT3-213ENST00000489870 DCTPP1Q9H773 170 aa11.5□□□□□ -0.57
CCT3-213ENST00000489870 SLC5A4Q9NY91 659 aa11.5□□□□□ -0.57
CCT3-213ENST00000489870 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.5□□□□□ -0.57
CCT3-213ENST00000489870 EVI5O60447 810 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 MYCP01106 439 aaPredicted RBP11.49□□□□□ -0.57
CCT3-213ENST00000489870 BMP8BP34820 402 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 MAP2K5Q13163 448 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 RAB3GAP1Q15042 981 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 Q3C1V9 767 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 C12orf60Q5U649 245 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 GPR142Q7Z601 462 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 ABRAQ8N0Z2 381 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 GPATCH3Q96I76 525 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 APBA2Q99767 749 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 KANSL2Q9H9L4 492 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 ZNF287Q9HBT7 754 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 TXNRD2Q9NNW7 524 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 SYNPO2Q9UMS6 1093 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 COLQQ9Y215 455 aaPredicted RBP11.49□□□□□ -0.57
CCT3-213ENST00000489870 TMX2Q9Y320 296 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 IVNS1ABPQ9Y6Y0 642 aa11.49□□□□□ -0.57
CCT3-213ENST00000489870 ZKSCAN1P17029 563 aaPredicted RBP11.48□□□□□ -0.57
CCT3-213ENST00000489870 VCAM1P19320 739 aa11.48□□□□□ -0.57
CCT3-213ENST00000489870 PTPREP23469 700 aa11.48□□□□□ -0.57
CCT3-213ENST00000489870 FXR1P51114 621 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCT3-213ENST00000489870 AAMPQ13685 434 aa11.48□□□□□ -0.57
CCT3-213ENST00000489870 SBK1Q52WX2 424 aa11.48□□□□□ -0.57
CCT3-213ENST00000489870 MFSD14CQ5VZR4 134 aa11.48□□□□□ -0.57
CCT3-213ENST00000489870 GPR153Q6NV75 609 aa11.48□□□□□ -0.57
CCT3-213ENST00000489870 DNAJC2Q99543 621 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms