RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 TIAF1O95411 115 aa6.81□□□□□ -1.32
SRRM1-215ENST00000488317 CST3P01034 146 aaPredicted RBP6.81□□□□□ -1.32
SRRM1-215ENST00000488317 TP53P04637 393 aaPredicted RBP6.81□□□□□ -1.32
SRRM1-215ENST00000488317 SLBPQ14493 270 aaKnown RBP eCLIP6.81□□□□□ -1.32
SRRM1-215ENST00000488317 RNF187Q5TA31 235 aaPredicted RBP6.81□□□□□ -1.32
SRRM1-215ENST00000488317 UBE3DQ7Z6J8 389 aa6.81□□□□□ -1.32
SRRM1-215ENST00000488317 C2CD4AQ8NCU7 369 aaPredicted RBP6.81□□□□□ -1.32
SRRM1-215ENST00000488317 FOXQ1Q9C009 403 aa6.81□□□□□ -1.32
SRRM1-215ENST00000488317 AKTIPQ9H8T0 292 aa6.81□□□□□ -1.32
SRRM1-215ENST00000488317 FAM105AQ9NUU6 356 aa6.81□□□□□ -1.32
SRRM1-215ENST00000488317 ZMYM5Q9UJ78 669 aa6.81□□□□□ -1.32
SRRM1-215ENST00000488317 PCOLCE2Q9UKZ9 415 aa6.81□□□□□ -1.32
SRRM1-215ENST00000488317 AGRPO00253 132 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 SUSD5O60279 629 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 GLB1P16278 677 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 RAB6AP20340 208 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 PMS1P54277 932 aaKnown RBP6.8□□□□□ -1.32
SRRM1-215ENST00000488317 SV2CQ496J9 727 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 C2orf27AQ580R0 203 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 TDRD10Q5VZ19 366 aaKnown RBP6.8□□□□□ -1.32
SRRM1-215ENST00000488317 TREML4Q6UXN2 200 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 TMEM192Q8IY95 271 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 ANKRD13AQ8IZ07 590 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 TMEM130Q8N3G9 435 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 CYB5D2Q8WUJ1 264 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 KLHL6Q8WZ60 621 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 CEP41Q9BYV8 373 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 LGR6Q9HBX8 967 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 SUCOQ9UBS9 1254 aaKnown RBP6.8□□□□□ -1.32
SRRM1-215ENST00000488317 LEMD3Q9Y2U8 911 aa6.8□□□□□ -1.32
SRRM1-215ENST00000488317 IQCA1LA6NCM1 817 aa6.79□□□□□ -1.32
SRRM1-215ENST00000488317 PPP1R12AO14974 1030 aaPredicted RBP6.79□□□□□ -1.32
SRRM1-215ENST00000488317 LRIG2O94898 1065 aa6.79□□□□□ -1.32
SRRM1-215ENST00000488317 UBOX5O94941 541 aa6.79□□□□□ -1.32
SRRM1-215ENST00000488317 NAT2P11245 290 aa6.79□□□□□ -1.32
SRRM1-215ENST00000488317 PLEKHG4Q58EX7 1191 aa6.79□□□□□ -1.32
SRRM1-215ENST00000488317 ARMCX6Q7L4S7 300 aa6.79□□□□□ -1.32
SRRM1-215ENST00000488317 CCDC144CPQ8IYA2 1237 aa6.79□□□□□ -1.32
SRRM1-215ENST00000488317 BEND7Q8N7W2 519 aaPredicted RBP6.79□□□□□ -1.32
SRRM1-215ENST00000488317 PPP1R14AQ96A00 147 aa6.79□□□□□ -1.32
SRRM1-215ENST00000488317 ZNF669Q96BR6 464 aaPredicted RBP6.79□□□□□ -1.32
SRRM1-215ENST00000488317 SPATA9Q9BWV2 254 aa6.79□□□□□ -1.32
SRRM1-215ENST00000488317 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.79□□□□□ -1.32
SRRM1-215ENST00000488317 EPN3Q9H201 632 aa6.79□□□□□ -1.32
SRRM1-215ENST00000488317 GSX1Q9H4S2 264 aaPredicted RBP6.79□□□□□ -1.32
SRRM1-215ENST00000488317 DAGLAQ9Y4D2 1042 aa6.79□□□□□ -1.32
SRRM1-215ENST00000488317 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.78□□□□□ -1.32
SRRM1-215ENST00000488317 APBA3O96018 575 aa6.78□□□□□ -1.32
SRRM1-215ENST00000488317 CAP2P40123 477 aa6.78□□□□□ -1.32
SRRM1-215ENST00000488317 SQSTM1Q13501 440 aa6.78□□□□□ -1.32
SRRM1-215ENST00000488317 SLC10A6Q3KNW5 377 aa6.78□□□□□ -1.32
SRRM1-215ENST00000488317 TAF7LQ5H9L4 462 aa6.78□□□□□ -1.32
SRRM1-215ENST00000488317 HEATR6Q6AI08 1181 aaKnown RBP6.78□□□□□ -1.32
SRRM1-215ENST00000488317 C16orf86Q6ZW13 317 aa6.78□□□□□ -1.32
SRRM1-215ENST00000488317 LRRC47Q8N1G4 583 aaKnown RBP6.78□□□□□ -1.32
SRRM1-215ENST00000488317 MFSD2AQ8NA29 543 aa6.78□□□□□ -1.32
SRRM1-215ENST00000488317 ZNF512BQ96KM6 892 aaPredicted RBP6.78□□□□□ -1.32
SRRM1-215ENST00000488317 APBA2Q99767 749 aa6.78□□□□□ -1.32
SRRM1-215ENST00000488317 YIPF2Q9BWQ6 316 aa6.78□□□□□ -1.32
SRRM1-215ENST00000488317 TMEM260Q9NX78 707 aa6.78□□□□□ -1.32
SRRM1-215ENST00000488317 LRP2BPQ9P2M1 347 aa6.78□□□□□ -1.32
SRRM1-215ENST00000488317 PTCH2Q9Y6C5 1203 aa6.78□□□□□ -1.32
SRRM1-215ENST00000488317 CNTNAP5Q8WYK1 1306 aa6.77□□□□□ -1.32
SRRM1-215ENST00000488317 SPATA31C1P0DKV0 1188 aa6.77□□□□□ -1.33
SRRM1-215ENST00000488317 RXRBP28702 533 aa6.77□□□□□ -1.33
SRRM1-215ENST00000488317 PREPP48147 710 aa6.77□□□□□ -1.33
SRRM1-215ENST00000488317 ADAT2Q7Z6V5 191 aaKnown RBP6.77□□□□□ -1.33
SRRM1-215ENST00000488317 PPFIBP1Q86W92 1011 aa6.77□□□□□ -1.33
SRRM1-215ENST00000488317 ZSWIM2Q8NEG5 633 aa6.77□□□□□ -1.33
SRRM1-215ENST00000488317 LENG1Q96BZ8 264 aaPredicted RBP6.77□□□□□ -1.33
SRRM1-215ENST00000488317 MIPEPQ99797 713 aa6.77□□□□□ -1.33
SRRM1-215ENST00000488317 MKRN2Q9H000 416 aaKnown RBP6.77□□□□□ -1.33
SRRM1-215ENST00000488317 ANKRD34BA5PLL1 514 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 C9IYK1 514 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 C9orf172C9J069 976 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 EPHX1P07099 455 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 NFICP08651 508 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 FAM153BP0C7A2 387 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 CDK11BP21127 795 aaKnown RBP6.76□□□□□ -1.33
SRRM1-215ENST00000488317 IBSPP21815 317 aaPredicted RBP6.76□□□□□ -1.33
SRRM1-215ENST00000488317 TCEA2Q15560 299 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 CDPF1Q6NVV7 123 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 FILIP1Q7Z7B0 1213 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 FBLIM1Q8WUP2 373 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 SMARCC1Q92922 1105 aaPredicted RBP6.76□□□□□ -1.33
SRRM1-215ENST00000488317 IPO9Q96P70 1041 aaKnown RBP6.76□□□□□ -1.33
SRRM1-215ENST00000488317 NACC1Q96RE7 527 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 HAUS7Q99871 368 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 ACSS3Q9H6R3 686 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 CEP131Q9UPN4 1083 aa6.76□□□□□ -1.33
SRRM1-215ENST00000488317 ASMTLO95671 621 aa6.75□□□□□ -1.33
SRRM1-215ENST00000488317 IREB2P48200 963 aaKnown RBP6.75□□□□□ -1.33
SRRM1-215ENST00000488317 ZNF143P52747 638 aaPredicted RBP6.75□□□□□ -1.33
SRRM1-215ENST00000488317 GYS2P54840 703 aa6.75□□□□□ -1.33
SRRM1-215ENST00000488317 NRG1Q02297 640 aaPredicted RBP6.75□□□□□ -1.33
SRRM1-215ENST00000488317 PTPROQ16827 1216 aa6.75□□□□□ -1.33
SRRM1-215ENST00000488317 AXDND1Q5T1B0 1012 aaPredicted RBP6.75□□□□□ -1.33
SRRM1-215ENST00000488317 LETMD1Q6P1Q0 360 aa6.75□□□□□ -1.33
SRRM1-215ENST00000488317 CDH24Q86UP0 819 aa6.75□□□□□ -1.33
SRRM1-215ENST00000488317 ZBTB38Q8NAP3 1195 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms