RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 IL17RBQ9NRM6 502 aa8.07□□□□□ -1.12
PDAP1-203ENST00000488214 PI4KBQ9UBF8 816 aa8.07□□□□□ -1.12
PDAP1-203ENST00000488214 CNOT7Q9UIV1 285 aaKnown RBP8.07□□□□□ -1.12
PDAP1-203ENST00000488214 MTMR7Q9Y216 660 aa8.07□□□□□ -1.12
PDAP1-203ENST00000488214 PAPPA2Q9BXP8 1791 aa8.07□□□□□ -1.12
PDAP1-203ENST00000488214 WDR90Q96KV7 1748 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 ASTN2O75129 1339 aaPredicted RBP8.06□□□□□ -1.12
PDAP1-203ENST00000488214 STK36Q9NRP7 1315 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 BAZ2BQ9UIF8 2168 aaKnown RBP8.06□□□□□ -1.12
PDAP1-203ENST00000488214 CCDC196A0A1B0GTZ2 297 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 H3BQV1 296 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 H7C1D1 291 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 GDF11O95390 407 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 CALM1P0DP23 149 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 CALM2P0DP24 149 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 CALM3P0DP25 149 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 ZSCAN22P10073 491 aaPredicted RBP8.06□□□□□ -1.12
PDAP1-203ENST00000488214 LMOD1P29536 600 aaPredicted RBP8.06□□□□□ -1.12
PDAP1-203ENST00000488214 TNFAIP1Q13829 316 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 NFKBIBQ15653 356 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 IFFO2Q5TF58 517 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 RCSD1Q6JBY9 416 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 CDC37L1Q7L3B6 337 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 RASGRP2Q7LDG7 609 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 DGKHQ86XP1 1220 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 CDAN1Q8IWY9 1227 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 LRRC47Q8N1G4 583 aaKnown RBP8.06□□□□□ -1.12
PDAP1-203ENST00000488214 PNMA1Q8ND90 353 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 NEDD1Q8NHV4 660 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 CTCFLQ8NI51 663 aaPredicted RBP8.06□□□□□ -1.12
PDAP1-203ENST00000488214 TRPM4Q8TD43 1214 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 FAM151AQ8WW52 585 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 PHKBQ93100 1093 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 SLC26A6Q9BXS9 759 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 TCP11L1Q9NUJ3 509 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 RNF216Q9NWF9 866 aaPredicted RBP8.06□□□□□ -1.12
PDAP1-203ENST00000488214 GPRC5DQ9NZD1 345 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 ORC3Q9UBD5 711 aaPredicted RBP8.06□□□□□ -1.12
PDAP1-203ENST00000488214 SCAF8Q9UPN6 1271 aaKnown RBP8.06□□□□□ -1.12
PDAP1-203ENST00000488214 ZDHHC9Q9Y397 364 aa8.06□□□□□ -1.12
PDAP1-203ENST00000488214 CNTNAP5Q8WYK1 1306 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 DDNO94850 711 aaPredicted RBP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 PLEKHA8P1O95397 391 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 F13A1P00488 732 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 TOP1P11387 765 aaKnown RBP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 KIF5BP33176 963 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 ADD1P35611 737 aaKnown RBP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 ATP2B2Q01814 1243 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 TROAPQ12815 778 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 SHROOM1Q2M3G4 852 aaPredicted RBP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 FOXD4L6Q3SYB3 417 aaPredicted RBP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 CERKLQ49MI3 558 aaPredicted RBP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 ANGEL2Q5VTE6 544 aaKnown RBP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 FKBP1CQ5VVH2 108 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 FOXD4L3Q6VB84 417 aaPredicted RBP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 FERMT3Q86UX7 667 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 FAM83AQ86UY5 434 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 TRIM22Q8IYM9 498 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 CMTR1Q8N1G2 835 aaKnown RBP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 FANCBQ8NB91 859 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 C8orf76Q96K31 380 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 TMEM47Q9BQJ4 181 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 RBM28Q9NW13 759 aaKnown RBP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 GGA3Q9NZ52 723 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 HERC5Q9UII4 1024 aaKnown RBP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 HACL1Q9UJ83 578 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 MTMR6Q9Y217 621 aa8.05□□□□□ -1.12
PDAP1-203ENST00000488214 RBBP6Q7Z6E9 1792 aaKnown RBP8.05□□□□□ -1.12
PDAP1-203ENST00000488214 PHIPQ8WWQ0 1821 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 IGKV6D-41A0A0C4DH26 115 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 DDX11L8A8MPP1 907 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 FMNL1O95466 1100 aaPredicted RBP8.04□□□□□ -1.12
PDAP1-203ENST00000488214 TTLL1O95922 423 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 FDPSP14324 419 aaKnown RBP8.04□□□□□ -1.12
PDAP1-203ENST00000488214 IFNAR1P17181 557 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 EPS15P42566 896 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 GUCY1B3Q02153 619 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 ICA1Q05084 483 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 SSRP1Q08945 709 aaKnown RBP8.04□□□□□ -1.12
PDAP1-203ENST00000488214 RASA3Q14644 834 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 GRM4Q14833 912 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 NTRK3Q16288 839 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 ABCB5Q2M3G0 1257 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 PPP4R3BQ5MIZ7 849 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 TMTC3Q6ZXV5 915 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 APOBEC3FQ8IUX4 373 aaKnown RBP8.04□□□□□ -1.12
PDAP1-203ENST00000488214 FOXP4Q8IVH2 680 aaPredicted RBP8.04□□□□□ -1.12
PDAP1-203ENST00000488214 CCDC82Q8N4S0 544 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 ANKS1AQ92625 1134 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 CHAMP1Q96JM3 812 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 CCDC17Q96LX7 622 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 ALG1Q9BT22 464 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.04□□□□□ -1.12
PDAP1-203ENST00000488214 FAM217BQ9NTX9 383 aaPredicted RBP8.04□□□□□ -1.12
PDAP1-203ENST00000488214 MTMR4Q9NYA4 1195 aa8.04□□□□□ -1.12
PDAP1-203ENST00000488214 ISY1Q9ULR0 285 aaKnown RBP8.04□□□□□ -1.12
PDAP1-203ENST00000488214 SSC5DA1L4H1 1573 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 UBE2Q2LH0YL09 131 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 GOLGA6L22H0YM25 854 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms