RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 CERKLQ49MI3 558 aaPredicted RBP13.56□□□□□ -0.24
RAB11FIP3-210ENST00000487899 PXYLP1Q8TE99 480 aa13.56□□□□□ -0.24
RAB11FIP3-210ENST00000487899 P2RX7Q99572 595 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-210ENST00000487899 KIAA1683Q9H0B3 1180 aa13.56□□□□□ -0.24
RAB11FIP3-210ENST00000487899 UNC93B1Q9H1C4 597 aa13.56□□□□□ -0.24
RAB11FIP3-210ENST00000487899 DCTPP1Q9H773 170 aa13.56□□□□□ -0.24
RAB11FIP3-210ENST00000487899 ECHDC1Q9NTX5 307 aa13.56□□□□□ -0.24
RAB11FIP3-210ENST00000487899 PCDHB15Q9Y5E8 787 aa13.56□□□□□ -0.24
RAB11FIP3-210ENST00000487899 LAMA3Q16787 3333 aa13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 POLR3DP05423 398 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 VCAM1P19320 739 aa13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 GJA8P48165 433 aa13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 RAB3GAP1Q15042 981 aa13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 UBE3CQ15386 1083 aa13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 USP17L2Q6R6M4 530 aa13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 FEZ1Q99689 392 aa13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 PAK6Q9NQU5 681 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 GJD2Q9UKL4 321 aa13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 ROBO3Q96MS0 1386 aa13.55□□□□□ -0.24
RAB11FIP3-210ENST00000487899 CYP2D7A0A087X1C5 515 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 A0A1W2PRG0 241 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 CNMDO75829 334 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 GJB1P08034 283 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 ERVK-9P63128 1117 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 ERVK-24P63145 666 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 SEPT2Q15019 361 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 COA7Q96BR5 231 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 DYNLL2Q96FJ2 89 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 PUS7LQ9H0K6 701 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 RNF208Q9H0X6 261 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 PORCNQ9H237 461 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 ATP8A2Q9NTI2 1148 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 RBPJLQ9UBG7 517 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 SALL3Q9BXA9 1300 aa13.54□□□□□ -0.24
RAB11FIP3-210ENST00000487899 UBXN2AP68543 259 aa13.53□□□□□ -0.24
RAB11FIP3-210ENST00000487899 KBTBD3Q8NAB2 608 aa13.53□□□□□ -0.24
RAB11FIP3-210ENST00000487899 OTUD7AQ8TE49 926 aaPredicted RBP13.53□□□□□ -0.24
RAB11FIP3-210ENST00000487899 TRIB2Q92519 343 aa13.53□□□□□ -0.24
RAB11FIP3-210ENST00000487899 GCC1Q96CN9 775 aa13.53□□□□□ -0.24
RAB11FIP3-210ENST00000487899 HMGCRP04035 888 aa13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 AKR1B1P15121 316 aa13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP14P54578 494 aa13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 TRIM32Q13049 653 aa13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 KIAA1755Q5JYT7 1200 aa13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 C12orf60Q5U649 245 aa13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 LBX2Q6XYB7 198 aa13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 GPRC5AQ8NFJ5 357 aa13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 PI4K2BQ8TCG2 481 aa13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 U2AF1L4Q8WU68 220 aaKnown RBP13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 GTF3C2Q8WUA4 911 aaPredicted RBP13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 PAGR1Q9BTK6 254 aa13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 BIN2Q9UBW5 565 aaPredicted RBP13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 SWAP70Q9UH65 585 aa13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 TAOK2Q9UL54 1235 aa13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 LAMA2P24043 3122 aaKnown RBP13.52□□□□□ -0.25
RAB11FIP3-210ENST00000487899 TRIOBPQ9H2D6 2365 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 SPDYE16A6NNV3 312 aaPredicted RBP13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP17L15C9J2P7 530 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 Q3C1V9 767 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 HABP4Q5JVS0 413 aaKnown RBP13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 CATSPERGQ6ZRH7 1159 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 TMEM179Q6ZVK1 233 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 C16orf86Q6ZW13 317 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 NKX2-3Q8TAU0 364 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 SOCS4Q8WXH5 440 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP6NLQ92738 828 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 RPAP3Q9H6T3 665 aaPredicted RBP13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 EPB41L4AQ9HCS5 686 aaPredicted RBP13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 CABP5Q9NP86 173 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 SLC4A4Q9Y6R1 1079 aa13.51□□□□□ -0.25
RAB11FIP3-210ENST00000487899 LRRC37A2A6NM11 1700 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 TTC41PQ6P2S7 1318 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP17L12C9JPN9 530 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 USP17L21D6R901 530 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 MPHOSPH10O00566 681 aaKnown RBP13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 MAPK4P31152 587 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 MORN1Q5T089 497 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 MAP3K21Q5TCX8 1036 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 ZSCAN25Q6NSZ9 544 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 CTR9Q6PD62 1173 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 SIAH1Q8IUQ4 282 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 APPBP2Q92624 585 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 OSBP2Q969R2 916 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 GPATCH3Q96I76 525 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 STRBPQ96SI9 672 aaKnown RBP13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 CRBNQ96SW2 442 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 BTBD7Q9P203 1132 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 ARPP21Q9UBL0 812 aaPredicted RBP13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 MCM3APO60318 1980 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms