RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 IRS2Q9Y4H2 1338 aa29.89■■■□□ 2.38
HLA-C-208ENST00000487245 TROAPQ12815 778 aa29.89■■■□□ 2.37
HLA-C-208ENST00000487245 FOXP4Q8IVH2 680 aaPredicted RBP29.89■■■□□ 2.37
HLA-C-208ENST00000487245 PCDHA5Q9Y5H7 936 aa29.89■■■□□ 2.37
HLA-C-208ENST00000487245 SRPRBQ9Y5M8 271 aaKnown RBP29.89■■■□□ 2.37
HLA-C-208ENST00000487245 CCP110O43303 1012 aa29.88■■■□□ 2.37
HLA-C-208ENST00000487245 PDE4BQ07343 736 aa29.88■■■□□ 2.37
HLA-C-208ENST00000487245 WDR66Q8TBY9 1149 aa29.88■■■□□ 2.37
HLA-C-208ENST00000487245 ZNF592Q92610 1267 aa29.88■■■□□ 2.37
HLA-C-208ENST00000487245 FEZ1Q99689 392 aa29.88■■■□□ 2.37
HLA-C-208ENST00000487245 PHF20Q9BVI0 1012 aa29.88■■■□□ 2.37
HLA-C-208ENST00000487245 TRMT1Q9NXH9 659 aaKnown RBP29.88■■■□□ 2.37
HLA-C-208ENST00000487245 LAMB1P07942 1786 aa29.88■■■□□ 2.37
HLA-C-208ENST00000487245 ATP1A3P13637 1013 aa29.87■■■□□ 2.37
HLA-C-208ENST00000487245 KRT2P35908 639 aa29.87■■■□□ 2.37
HLA-C-208ENST00000487245 GRAPQ13588 217 aa29.87■■■□□ 2.37
HLA-C-208ENST00000487245 PKN1Q16512 942 aa29.87■■■□□ 2.37
HLA-C-208ENST00000487245 GRAPLQ8TC17 118 aaPredicted RBP29.87■■■□□ 2.37
HLA-C-208ENST00000487245 PPP1R13BQ96KQ4 1090 aa29.87■■■□□ 2.37
HLA-C-208ENST00000487245 BRMS1Q9HCU9 246 aa29.87■■■□□ 2.37
HLA-C-208ENST00000487245 SMIM22K7EJ46 135 aa29.87■■■□□ 2.37
HLA-C-208ENST00000487245 BMP15O95972 392 aa29.87■■■□□ 2.37
HLA-C-208ENST00000487245 PRDX5P30044 214 aa29.87■■■□□ 2.37
HLA-C-208ENST00000487245 UBASH3AP57075 661 aa29.87■■■□□ 2.37
HLA-C-208ENST00000487245 DZIP1Q86YF9 867 aaKnown RBP29.87■■■□□ 2.37
HLA-C-208ENST00000487245 KIAA1551Q9HCM1 1747 aa29.87■■■□□ 2.37
HLA-C-208ENST00000487245 PRDM1O75626 825 aa29.86■■■□□ 2.37
HLA-C-208ENST00000487245 NR5A1Q13285 461 aa29.86■■■□□ 2.37
HLA-C-208ENST00000487245 ISM2Q6H9L7 571 aa29.86■■■□□ 2.37
HLA-C-208ENST00000487245 KANK3Q6NY19 840 aa29.86■■■□□ 2.37
HLA-C-208ENST00000487245 TMTC3Q6ZXV5 915 aa29.86■■■□□ 2.37
HLA-C-208ENST00000487245 VSTM4Q8IW00 320 aa29.86■■■□□ 2.37
HLA-C-208ENST00000487245 TRIML1Q8N9V2 468 aa29.86■■■□□ 2.37
HLA-C-208ENST00000487245 SARSP49591 514 aaKnown RBP29.85■■■□□ 2.37
HLA-C-208ENST00000487245 CTCFLQ8NI51 663 aaPredicted RBP29.85■■■□□ 2.37
HLA-C-208ENST00000487245 ERO1AQ96HE7 468 aa29.85■■■□□ 2.37
HLA-C-208ENST00000487245 TMX1Q9H3N1 280 aa29.85■■■□□ 2.37
HLA-C-208ENST00000487245 CABP5Q9NP86 173 aa29.85■■■□□ 2.37
HLA-C-208ENST00000487245 ADRA2BP18089 450 aa29.85■■■□□ 2.37
HLA-C-208ENST00000487245 GSTO1P78417 241 aa29.85■■■□□ 2.37
HLA-C-208ENST00000487245 CCDC24Q8N4L8 307 aa29.85■■■□□ 2.37
HLA-C-208ENST00000487245 PCDHB6Q9Y5E3 794 aa29.85■■■□□ 2.37
HLA-C-208ENST00000487245 V9GY48 417 aaPredicted RBP29.85■■■□□ 2.37
HLA-C-208ENST00000487245 TRIM75PA6NK02 468 aa29.84■■■□□ 2.37
HLA-C-208ENST00000487245 POSTNQ15063 836 aa29.84■■■□□ 2.37
HLA-C-208ENST00000487245 C15orf52Q6ZUT6 534 aaKnown RBP29.84■■■□□ 2.37
HLA-C-208ENST00000487245 MLKLQ8NB16 471 aa29.84■■■□□ 2.37
HLA-C-208ENST00000487245 OXER1Q8TDS5 423 aa29.84■■■□□ 2.37
HLA-C-208ENST00000487245 ZMYND15Q9H091 742 aa29.84■■■□□ 2.37
HLA-C-208ENST00000487245 DACH1Q9UI36 760 aa29.84■■■□□ 2.37
HLA-C-208ENST00000487245 SERPINC1P01008 464 aa29.83■■■□□ 2.37
HLA-C-208ENST00000487245 BMP6P22004 513 aa29.83■■■□□ 2.37
HLA-C-208ENST00000487245 DPF2Q92785 391 aa29.83■■■□□ 2.37
HLA-C-208ENST00000487245 L2HGDHQ9H9P8 463 aa29.83■■■□□ 2.37
HLA-C-208ENST00000487245 ANKIB1Q9P2G1 1089 aa29.83■■■□□ 2.37
HLA-C-208ENST00000487245 MAN1B1Q9UKM7 699 aa29.83■■■□□ 2.37
HLA-C-208ENST00000487245 LDHBP07195 334 aaKnown RBP29.82■■■□□ 2.37
HLA-C-208ENST00000487245 TXNRD3Q86VQ6 643 aa29.82■■■□□ 2.37
HLA-C-208ENST00000487245 FCHSD1Q86WN1 690 aa29.82■■■□□ 2.37
HLA-C-208ENST00000487245 VPS54Q9P1Q0 977 aa29.82■■■□□ 2.37
HLA-C-208ENST00000487245 XDHP47989 1333 aa29.82■■■□□ 2.36
HLA-C-208ENST00000487245 PLEKHA8P1O95397 391 aa29.82■■■□□ 2.36
HLA-C-208ENST00000487245 CCDC178Q5BJE1 867 aa29.82■■■□□ 2.36
HLA-C-208ENST00000487245 CNBD1Q8NA66 436 aa29.82■■■□□ 2.36
HLA-C-208ENST00000487245 CCDC34Q96HJ3 373 aa29.82■■■□□ 2.36
HLA-C-208ENST00000487245 ARID3AQ99856 593 aa29.82■■■□□ 2.36
HLA-C-208ENST00000487245 MORC3Q14149 939 aa29.81■■■□□ 2.36
HLA-C-208ENST00000487245 NFIXQ14938 502 aa29.81■■■□□ 2.36
HLA-C-208ENST00000487245 CT47A1Q5JQC4 288 aaPredicted RBP29.81■■■□□ 2.36
HLA-C-208ENST00000487245 AMIGO3Q86WK7 504 aa29.81■■■□□ 2.36
HLA-C-208ENST00000487245 FANCLQ9NW38 375 aa29.81■■■□□ 2.36
HLA-C-208ENST00000487245 TNRC6CQ9HCJ0 1690 aaKnown RBP29.81■■■□□ 2.36
HLA-C-208ENST00000487245 SLU7O95391 586 aaKnown RBP29.8■■■□□ 2.36
HLA-C-208ENST00000487245 ZNF804AQ7Z570 1209 aa29.8■■■□□ 2.36
HLA-C-208ENST00000487245 ENOX1Q8TC92 643 aaKnown RBP29.8■■■□□ 2.36
HLA-C-208ENST00000487245 ZNF215Q9UL58 517 aaPredicted RBP29.8■■■□□ 2.36
HLA-C-208ENST00000487245 LDHCP07864 332 aa29.8■■■□□ 2.36
HLA-C-208ENST00000487245 CFAP100Q494V2 611 aa29.8■■■□□ 2.36
HLA-C-208ENST00000487245 SPATA20Q8TB22 786 aa29.8■■■□□ 2.36
HLA-C-208ENST00000487245 GJD4Q96KN9 370 aaPredicted RBP29.8■■■□□ 2.36
HLA-C-208ENST00000487245 SERTAD1Q9UHV2 236 aa29.8■■■□□ 2.36
HLA-C-208ENST00000487245 CNTNAP5Q8WYK1 1306 aa29.79■■■□□ 2.36
HLA-C-208ENST00000487245 TSPY2A6NKD2 308 aa29.79■■■□□ 2.36
HLA-C-208ENST00000487245 FOXN1O15353 648 aa29.79■■■□□ 2.36
HLA-C-208ENST00000487245 ACTN4O43707 911 aaKnown RBP29.79■■■□□ 2.36
HLA-C-208ENST00000487245 BAG3O95817 575 aa29.79■■■□□ 2.36
HLA-C-208ENST00000487245 KIF5BP33176 963 aa29.79■■■□□ 2.36
HLA-C-208ENST00000487245 GRIN1Q05586 938 aa29.79■■■□□ 2.36
HLA-C-208ENST00000487245 FAM196AQ6ZSG2 479 aa29.79■■■□□ 2.36
HLA-C-208ENST00000487245 CERS3Q8IU89 383 aa29.79■■■□□ 2.36
HLA-C-208ENST00000487245 MCM9Q9NXL9 1143 aa29.79■■■□□ 2.36
HLA-C-208ENST00000487245 POLR2DO15514 142 aaKnown RBP29.78■■■□□ 2.36
HLA-C-208ENST00000487245 ZNF18P17022 549 aa29.78■■■□□ 2.36
HLA-C-208ENST00000487245 AMOTL1Q8IY63 956 aa29.78■■■□□ 2.36
HLA-C-208ENST00000487245 SMARCE1Q969G3 411 aa29.78■■■□□ 2.36
HLA-C-208ENST00000487245 FERMT2Q96AC1 680 aa29.78■■■□□ 2.36
HLA-C-208ENST00000487245 SBF2Q86WG5 1849 aa29.78■■■□□ 2.36
HLA-C-208ENST00000487245 PPP4CP60510 307 aa29.78■■■□□ 2.36
HLA-C-208ENST00000487245 TBX2Q13207 712 aaPredicted RBP29.78■■■□□ 2.36
HLA-C-208ENST00000487245 C12orf60Q5U649 245 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms