RNA–Protein interactions for RNA: ENST00000486585.1

PCMT1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 3

Gene PCMT1, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-208	ENST00000486585	SAP30BP	Q9UHR5	308 aa	Known RBP	12.01	□□□□□ -0.49
PCMT1-208	ENST00000486585	SERPINB13	Q9UIV8	391 aa		12.01	□□□□□ -0.49
PCMT1-208	ENST00000486585	PFAS	O15067	1338 aa		12.01	□□□□□ -0.49
PCMT1-208	ENST00000486585	SURF6	O75683	361 aa	Known RBP	12	□□□□□ -0.49
PCMT1-208	ENST00000486585	GH2	P01242	217 aa		12	□□□□□ -0.49
PCMT1-208	ENST00000486585	CYP7A1	P22680	504 aa		12	□□□□□ -0.49
PCMT1-208	ENST00000486585	JAG1	P78504	1218 aa		12	□□□□□ -0.49
PCMT1-208	ENST00000486585	ATP2B2	Q01814	1243 aa		12	□□□□□ -0.49
PCMT1-208	ENST00000486585	WDR78	Q5VTH9	848 aa		12	□□□□□ -0.49
PCMT1-208	ENST00000486585	DBNDD2	Q9BQY9	259 aa		12	□□□□□ -0.49
PCMT1-208	ENST00000486585	KIAA1683	Q9H0B3	1180 aa		12	□□□□□ -0.49
PCMT1-208	ENST00000486585	EHD4	Q9H223	541 aa		12	□□□□□ -0.49
PCMT1-208	ENST00000486585	PORCN	Q9H237	461 aa		12	□□□□□ -0.49
PCMT1-208	ENST00000486585	IDH1	O75874	414 aa	Known RBP	11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	CCND3	P30281	292 aa	Predicted RBP	11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	ZAP70	P43403	619 aa		11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	ATP8B2	P98198	1209 aa		11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	POLA2	Q14181	598 aa		11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	CCL14	Q16627	93 aa		11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	LRRC26	Q2I0M4	334 aa		11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	ABCB5	Q2M3G0	1257 aa		11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	CERKL	Q49MI3	558 aa	Predicted RBP	11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	TATDN1	Q6P1N9	297 aa		11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	LBX2	Q6XYB7	198 aa		11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	CATSPERG	Q6ZRH7	1159 aa		11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	ADGRA1	Q86SQ6	560 aa		11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	SSH3	Q8TE77	659 aa		11.99	□□□□□ -0.49
PCMT1-208	ENST00000486585	STRN	O43815	780 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	HOXC6	P09630	235 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	PTPRE	P23469	700 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	CNGA1	P29973	690 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	MAP3K12	Q12852	859 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	RAB3GAP1	Q15042	981 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	ZYX	Q15942	572 aa	Known RBP	11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	ZKSCAN2	Q63HK3	967 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585		Q7L0L9	218 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	ARRDC4	Q8NCT1	418 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	LPAR1	Q92633	364 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	CLUAP1	Q96AJ1	413 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	SLC5A4	Q9NY91	659 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	HOXC10	Q9NYD6	342 aa		11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	DDX20	Q9UHI6	824 aa	Known RBP	11.98	□□□□□ -0.49
PCMT1-208	ENST00000486585	DNM1L	O00429	736 aa		11.97	□□□□□ -0.49
PCMT1-208	ENST00000486585	PEX10	O60683	326 aa		11.97	□□□□□ -0.49
PCMT1-208	ENST00000486585	VCAM1	P19320	739 aa		11.97	□□□□□ -0.49
PCMT1-208	ENST00000486585	MDM2	Q00987	491 aa	Predicted RBP	11.97	□□□□□ -0.49
PCMT1-208	ENST00000486585	PIH1D3	Q9NQM4	214 aa	Known RBP	11.97	□□□□□ -0.49
PCMT1-208	ENST00000486585	NOP58	Q9Y2X3	529 aa	Known RBP	11.97	□□□□□ -0.49
PCMT1-208	ENST00000486585	MYH8	P13535	1937 aa		11.96	□□□□□ -0.49
PCMT1-208	ENST00000486585	CCER2	I3L3R5	266 aa		11.96	□□□□□ -0.49
PCMT1-208	ENST00000486585	DYNLL1	P63167	89 aa	Known RBP	11.96	□□□□□ -0.49
PCMT1-208	ENST00000486585	GRB14	Q14449	540 aa		11.96	□□□□□ -0.49
PCMT1-208	ENST00000486585	COG2	Q14746	738 aa		11.96	□□□□□ -0.49
PCMT1-208	ENST00000486585	TTF1	Q15361	905 aa	Predicted RBP	11.96	□□□□□ -0.49
PCMT1-208	ENST00000486585	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.96	□□□□□ -0.49
PCMT1-208	ENST00000486585	DPP9	Q86TI2	863 aa		11.96	□□□□□ -0.49
PCMT1-208	ENST00000486585	ERC1	Q8IUD2	1116 aa		11.96	□□□□□ -0.49
PCMT1-208	ENST00000486585	MAGEB6	Q8N7X4	407 aa		11.96	□□□□□ -0.49
PCMT1-208	ENST00000486585	MIGA1	Q8NAN2	632 aa		11.96	□□□□□ -0.49
PCMT1-208	ENST00000486585	DBNL	Q9UJU6	430 aa	Known RBP	11.96	□□□□□ -0.49
PCMT1-208	ENST00000486585	DNAH12	Q6ZR08	3092 aa		11.96	□□□□□ -0.5
PCMT1-208	ENST00000486585	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.96	□□□□□ -0.5
PCMT1-208	ENST00000486585	KBTBD13	C9JR72	458 aa		11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	POTEB2	H3BUK9	544 aa		11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	BCAR3	O75815	825 aa		11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	CNMD	O75829	334 aa		11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	POLR3D	P05423	398 aa	Predicted RBP	11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	OLFML2B	Q68BL8	750 aa		11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	POTEE	Q6S8J3	1075 aa		11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	FTSJ3	Q8IY81	847 aa	Known RBP	11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	TMEM57	Q8N5G2	664 aa		11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	MB21D1	Q8N884	522 aa		11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	RLF	Q13129	1914 aa		11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	ZNF236	Q9UL36	1845 aa		11.95	□□□□□ -0.5
PCMT1-208	ENST00000486585	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.94	□□□□□ -0.5
PCMT1-208	ENST00000486585	HSP90AB4P	Q58FF6	505 aa		11.94	□□□□□ -0.5
PCMT1-208	ENST00000486585	SHCBP1	Q8NEM2	672 aa		11.94	□□□□□ -0.5
PCMT1-208	ENST00000486585	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.94	□□□□□ -0.5
PCMT1-208	ENST00000486585	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.94	□□□□□ -0.5
PCMT1-208	ENST00000486585	MROH8	Q9H579	483 aa		11.94	□□□□□ -0.5
PCMT1-208	ENST00000486585	FLRT1	Q9NZU1	646 aa		11.94	□□□□□ -0.5
PCMT1-208	ENST00000486585	BTBD7	Q9P203	1132 aa		11.94	□□□□□ -0.5
PCMT1-208	ENST00000486585	NDUFB9	Q9Y6M9	179 aa		11.94	□□□□□ -0.5
PCMT1-208	ENST00000486585	NAV1	Q8NEY1	1877 aa		11.93	□□□□□ -0.5
PCMT1-208	ENST00000486585	MAGEB6P1	A0A0J9YX57	407 aa		11.93	□□□□□ -0.5
PCMT1-208	ENST00000486585	CYBA	P13498	195 aa		11.93	□□□□□ -0.5
PCMT1-208	ENST00000486585	CYP2C19	P33261	490 aa		11.93	□□□□□ -0.5
PCMT1-208	ENST00000486585	ATN1	P54259	1190 aa	Predicted RBP	11.93	□□□□□ -0.5
PCMT1-208	ENST00000486585	RTP1	P59025	263 aa		11.93	□□□□□ -0.5
PCMT1-208	ENST00000486585	ZNF697	Q5TEC3	545 aa		11.93	□□□□□ -0.5
PCMT1-208	ENST00000486585	ABRA	Q8N0Z2	381 aa		11.93	□□□□□ -0.5
PCMT1-208	ENST00000486585	ACER1	Q8TDN7	264 aa		11.93	□□□□□ -0.5
PCMT1-208	ENST00000486585	EAF2	Q96CJ1	260 aa	Predicted RBP	11.93	□□□□□ -0.5
PCMT1-208	ENST00000486585	TANGO6	Q9C0B7	1094 aa		11.93	□□□□□ -0.5
PCMT1-208	ENST00000486585	SH2D4A	Q9H788	454 aa		11.93	□□□□□ -0.5
PCMT1-208	ENST00000486585	SMCHD1	A6NHR9	2005 aa		11.93	□□□□□ -0.5

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