RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 ARPP21Q9UBL0 812 aaPredicted RBP8.98□□□□□ -0.97
CPNE1-226ENST00000486021 RABGAP1Q9Y3P9 1069 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 TTC41PQ6P2S7 1318 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 PLXNB2O15031 1838 aa8.97□□□□□ -0.97
CPNE1-226ENST00000486021 SGPL1O95470 568 aa8.97□□□□□ -0.97
CPNE1-226ENST00000486021 XRCC5P13010 732 aaKnown RBP8.97□□□□□ -0.97
CPNE1-226ENST00000486021 CCL5P13501 91 aa8.97□□□□□ -0.97
CPNE1-226ENST00000486021 EN2P19622 333 aaPredicted RBP8.97□□□□□ -0.97
CPNE1-226ENST00000486021 RGS2P41220 211 aa8.97□□□□□ -0.97
CPNE1-226ENST00000486021 TREML2Q5T2D2 321 aa8.97□□□□□ -0.97
CPNE1-226ENST00000486021 TICAM2Q86XR7 235 aa8.97□□□□□ -0.97
CPNE1-226ENST00000486021 MB21D1Q8N884 522 aa8.97□□□□□ -0.97
CPNE1-226ENST00000486021 DPF3Q92784 378 aa8.97□□□□□ -0.97
CPNE1-226ENST00000486021 GOPCQ9HD26 462 aa8.97□□□□□ -0.97
CPNE1-226ENST00000486021 DCP1AQ9NPI6 582 aaPredicted RBP8.97□□□□□ -0.97
CPNE1-226ENST00000486021 SLC4A4Q9Y6R1 1079 aa8.97□□□□□ -0.97
CPNE1-226ENST00000486021 RPTORQ8N122 1335 aa8.97□□□□□ -0.97
CPNE1-226ENST00000486021 STRNO43815 780 aa8.96□□□□□ -0.98
CPNE1-226ENST00000486021 MSCO60682 206 aa8.96□□□□□ -0.98
CPNE1-226ENST00000486021 ECM2O94769 699 aaPredicted RBP8.96□□□□□ -0.98
CPNE1-226ENST00000486021 COPB2P35606 906 aa8.96□□□□□ -0.98
CPNE1-226ENST00000486021 ERVK-9P63128 1117 aa8.96□□□□□ -0.98
CPNE1-226ENST00000486021 ERVK-24P63145 666 aa8.96□□□□□ -0.98
CPNE1-226ENST00000486021 COG2Q14746 738 aa8.96□□□□□ -0.98
CPNE1-226ENST00000486021 LBX2Q6XYB7 198 aa8.96□□□□□ -0.98
CPNE1-226ENST00000486021 CATSPERGQ6ZRH7 1159 aa8.96□□□□□ -0.98
CPNE1-226ENST00000486021 KANSL2Q9H9L4 492 aa8.96□□□□□ -0.98
CPNE1-226ENST00000486021 MKNK2Q9HBH9 465 aa8.96□□□□□ -0.98
CPNE1-226ENST00000486021 PCDH10Q9P2E7 1040 aa8.96□□□□□ -0.98
CPNE1-226ENST00000486021 CTDP1Q9Y5B0 961 aaPredicted RBP8.96□□□□□ -0.98
CPNE1-226ENST00000486021 KIAA0100Q14667 2235 aaKnown RBP8.95□□□□□ -0.98
CPNE1-226ENST00000486021 MBD4O95243 580 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 MYCP01106 439 aaPredicted RBP8.95□□□□□ -0.98
CPNE1-226ENST00000486021 INHAP05111 366 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 ZKSCAN1P17029 563 aaPredicted RBP8.95□□□□□ -0.98
CPNE1-226ENST00000486021 PDE4BQ07343 736 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 ZYXQ15942 572 aaKnown RBP8.95□□□□□ -0.98
CPNE1-226ENST00000486021 WDR78Q5VTH9 848 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 MFSD14CQ5VZR4 134 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 NECAB2Q7Z6G3 386 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 PLEKHH3Q7Z736 793 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 SIRT2Q8IXJ6 389 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 ZNF444Q8N0Y2 327 aaPredicted RBP8.95□□□□□ -0.98
CPNE1-226ENST00000486021 KBTBD3Q8NAB2 608 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 U2AF1L4Q8WU68 220 aaKnown RBP8.95□□□□□ -0.98
CPNE1-226ENST00000486021 SDR42E1Q8WUS8 393 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 APPBP2Q92624 585 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 P2RX7Q99572 595 aaKnown RBP8.95□□□□□ -0.98
CPNE1-226ENST00000486021 PAGR1Q9BTK6 254 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 DNAJC18Q9H819 358 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 ARMT1Q9H993 441 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 GABRQQ9UN88 632 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 NDUFB9Q9Y6M9 179 aa8.95□□□□□ -0.98
CPNE1-226ENST00000486021 COL11A1P12107 1806 aaPredicted RBP8.94□□□□□ -0.98
CPNE1-226ENST00000486021 PLXNA1Q9UIW2 1896 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 TCRBV5S4A2TA0A5A2 114 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 SLC15A5A6NIM6 579 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 WDR46O15213 610 aaKnown RBP8.94□□□□□ -0.98
CPNE1-226ENST00000486021 RNF113AO15541 343 aaKnown RBP8.94□□□□□ -0.98
CPNE1-226ENST00000486021 FARP2O94887 1054 aaPredicted RBP8.94□□□□□ -0.98
CPNE1-226ENST00000486021 SLC25A27O95847 323 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 APPP05067 770 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 SHMT1P34896 483 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 TDO2P48775 406 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 PLCD1P51178 756 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 MFAP1P55081 439 aaKnown RBP8.94□□□□□ -0.98
CPNE1-226ENST00000486021 ICA1Q05084 483 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 GABPAQ06546 454 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 SBK1Q52WX2 424 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 C12orf60Q5U649 245 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 CCDC84Q86UT8 332 aaPredicted RBP8.94□□□□□ -0.98
CPNE1-226ENST00000486021 LCORLQ8N3X6 602 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 EDC3Q96F86 508 aaKnown RBP8.94□□□□□ -0.98
CPNE1-226ENST00000486021 APBA2Q99767 749 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 TANGO6Q9C0B7 1094 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 EMILIN3Q9NT22 766 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 PDE4DIPQ5VU43 2346 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 PARP14Q460N5 1801 aa8.94□□□□□ -0.98
CPNE1-226ENST00000486021 PATL2C9JE40 543 aaKnown RBP8.93□□□□□ -0.98
CPNE1-226ENST00000486021 USP17L12C9JPN9 530 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 USP17L21D6R901 530 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 EVI5O60447 810 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 FDX1P10109 184 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 VCAM1P19320 739 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 CYP2B6P20813 491 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 CDK8P49336 464 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 RRP1P56182 461 aaKnown RBP8.93□□□□□ -0.98
CPNE1-226ENST00000486021 ATP2B2Q01814 1243 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 MAP2K5Q13163 448 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 SEPT2Q15019 361 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 MTFR1Q15390 333 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 C16orf86Q6ZW13 317 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 GPR142Q7Z601 462 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 DPP9Q86TI2 863 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 SHCBP1Q8NEM2 672 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 DEFB118Q96PH6 123 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.93□□□□□ -0.98
CPNE1-226ENST00000486021 RWDD1Q9H446 243 aaPredicted RBP8.93□□□□□ -0.98
CPNE1-226ENST00000486021 MROH8Q9H579 483 aa8.93□□□□□ -0.98
CPNE1-226ENST00000486021 RPAP3Q9H6T3 665 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms