RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 FANCCQ00597 558 aa7.92□□□□□ -1.14
SMARCC1-207ENST00000485833 IKZF1Q13422 519 aa7.92□□□□□ -1.14
SMARCC1-207ENST00000485833 ZNF792Q3KQV3 632 aa7.92□□□□□ -1.14
SMARCC1-207ENST00000485833 PPP1R13LQ8WUF5 828 aa7.92□□□□□ -1.14
SMARCC1-207ENST00000485833 HSPA12BQ96MM6 686 aa7.92□□□□□ -1.14
SMARCC1-207ENST00000485833 BRMS1Q9HCU9 246 aa7.92□□□□□ -1.14
SMARCC1-207ENST00000485833 SEMA3GQ9NS98 782 aa7.92□□□□□ -1.14
SMARCC1-207ENST00000485833 CEP131Q9UPN4 1083 aa7.92□□□□□ -1.14
SMARCC1-207ENST00000485833 ST14Q9Y5Y6 855 aa7.92□□□□□ -1.14
SMARCC1-207ENST00000485833 RECKO95980 971 aa7.91□□□□□ -1.14
SMARCC1-207ENST00000485833 CDKAL1Q5VV42 579 aa7.91□□□□□ -1.14
SMARCC1-207ENST00000485833 KRTAP4-8Q9BYQ9 185 aa7.91□□□□□ -1.14
SMARCC1-207ENST00000485833 NACADO15069 1562 aa7.91□□□□□ -1.14
SMARCC1-207ENST00000485833 CHURC1-FNTBB4DL54 471 aa7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 H3BS24 57 aa7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 DNAJA2O60884 412 aa7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 ATE1O95260 518 aa7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 TNK2Q07912 1038 aa7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 APOBRQ0VD83 1088 aa7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 MLECQ14165 292 aa7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 THAP5Q7Z6K1 395 aa7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 PIWIL2Q8TC59 973 aaKnown RBP7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 PI4K2BQ8TCG2 481 aa7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 MBNL3Q9NUK0 354 aaKnown RBP7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 UBP1Q9NZI7 540 aa7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 ADAMTS6Q9UKP5 1117 aa7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 PCDHB14Q9Y5E9 798 aa7.9□□□□□ -1.14
SMARCC1-207ENST00000485833 RNASE1P07998 156 aaKnown RBP7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 ITGB5P18084 799 aa7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 ZP2Q05996 745 aa7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 SEZ6Q53EL9 994 aa7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 SLC23A3Q6PIS1 610 aa7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 USP48Q86UV5 1035 aa7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 KIAA0825Q8IV33 1275 aa7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 CCDC74BQ96LY2 380 aa7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 Q96M66 194 aa7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 SPON2Q9BUD6 331 aa7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 NT5C1AQ9BXI3 368 aa7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 RC3H2Q9HBD1 1191 aaKnown RBP7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 ATP13A1Q9HD20 1204 aa7.89□□□□□ -1.15
SMARCC1-207ENST00000485833 RBAK-RBAKDNI3L0D1 243 aa7.88□□□□□ -1.15
SMARCC1-207ENST00000485833 PAX4O43316 350 aa7.88□□□□□ -1.15
SMARCC1-207ENST00000485833 TNNI2P48788 182 aa7.88□□□□□ -1.15
SMARCC1-207ENST00000485833 PHACTR4Q8IZ21 702 aa7.88□□□□□ -1.15
SMARCC1-207ENST00000485833 RNF141Q8WVD5 230 aa7.88□□□□□ -1.15
SMARCC1-207ENST00000485833 RNF34Q969K3 372 aa7.88□□□□□ -1.15
SMARCC1-207ENST00000485833 EHMT1Q9H9B1 1298 aa7.88□□□□□ -1.15
SMARCC1-207ENST00000485833 GMIPQ9P107 970 aa7.88□□□□□ -1.15
SMARCC1-207ENST00000485833 CC2D2AQ9P2K1 1620 aa7.88□□□□□ -1.15
SMARCC1-207ENST00000485833 CECR2Q9BXF3 1484 aa7.87□□□□□ -1.15
SMARCC1-207ENST00000485833 JUNBP17275 347 aaPredicted RBP7.87□□□□□ -1.15
SMARCC1-207ENST00000485833 REXO1Q8N1G1 1221 aaKnown RBP7.87□□□□□ -1.15
SMARCC1-207ENST00000485833 BAHD1Q8TBE0 780 aaPredicted RBP7.87□□□□□ -1.15
SMARCC1-207ENST00000485833 PRDM7Q9NQW5 492 aa7.87□□□□□ -1.15
SMARCC1-207ENST00000485833 LMCD1Q9NZU5 365 aa7.87□□□□□ -1.15
SMARCC1-207ENST00000485833 SLC22A31A6NKX4 558 aa7.86□□□□□ -1.15
SMARCC1-207ENST00000485833 SCAMP3O14828 347 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-207ENST00000485833 ZNF394Q53GI3 561 aa7.86□□□□□ -1.15
SMARCC1-207ENST00000485833 SLITRK4Q8IW52 837 aa7.86□□□□□ -1.15
SMARCC1-207ENST00000485833 DTWD2Q8NBA8 298 aa7.86□□□□□ -1.15
SMARCC1-207ENST00000485833 LRRN4CLQ8ND94 238 aa7.86□□□□□ -1.15
SMARCC1-207ENST00000485833 NKD1Q969G9 470 aa7.86□□□□□ -1.15
SMARCC1-207ENST00000485833 MRRFQ96E11 262 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-207ENST00000485833 EAF1Q96JC9 268 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-207ENST00000485833 CARS2Q9HA77 564 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-207ENST00000485833 PCDHGB7Q9Y5F8 929 aa7.86□□□□□ -1.15
SMARCC1-207ENST00000485833 PAPLNO95428 1278 aa7.85□□□□□ -1.15
SMARCC1-207ENST00000485833 ZNF165P49910 485 aa7.85□□□□□ -1.15
SMARCC1-207ENST00000485833 ARSHQ5FYA8 562 aa7.85□□□□□ -1.15
SMARCC1-207ENST00000485833 OVOS1Q6IE37 1185 aa7.85□□□□□ -1.15
SMARCC1-207ENST00000485833 GK5Q6ZS86 529 aa7.85□□□□□ -1.15
SMARCC1-207ENST00000485833 RGS22Q8NE09 1264 aa7.85□□□□□ -1.15
SMARCC1-207ENST00000485833 UBE2FQ969M7 185 aa7.85□□□□□ -1.15
SMARCC1-207ENST00000485833 KREMEN1Q96MU8 473 aa7.85□□□□□ -1.15
SMARCC1-207ENST00000485833 KIF2CQ99661 725 aa7.85□□□□□ -1.15
SMARCC1-207ENST00000485833 ASPNQ9BXN1 380 aa7.85□□□□□ -1.15
SMARCC1-207ENST00000485833 ZSWIM5Q9P217 1185 aa7.85□□□□□ -1.15
SMARCC1-207ENST00000485833 KCNH3Q9ULD8 1083 aa7.85□□□□□ -1.15
SMARCC1-207ENST00000485833 BIN1O00499 593 aa7.84□□□□□ -1.15
SMARCC1-207ENST00000485833 RGS13O14921 159 aa7.84□□□□□ -1.15
SMARCC1-207ENST00000485833 RAG1P15918 1043 aa7.84□□□□□ -1.15
SMARCC1-207ENST00000485833 GBP1P32455 592 aa7.84□□□□□ -1.15
SMARCC1-207ENST00000485833 MCM4P33991 863 aa7.84□□□□□ -1.15
SMARCC1-207ENST00000485833 CLCQ05315 142 aa7.84□□□□□ -1.15
SMARCC1-207ENST00000485833 ATG4DQ86TL0 474 aaPredicted RBP7.84□□□□□ -1.15
SMARCC1-207ENST00000485833 FMNL2Q96PY5 1086 aa7.84□□□□□ -1.15
SMARCC1-207ENST00000485833 CDCP2Q5VXM1 449 aa7.83□□□□□ -1.16
SMARCC1-207ENST00000485833 TMPRSS7Q7RTY8 843 aa7.83□□□□□ -1.16
SMARCC1-207ENST00000485833 ASIC4Q96FT7 647 aa7.83□□□□□ -1.16
SMARCC1-207ENST00000485833 GPR62Q9BZJ7 368 aa7.83□□□□□ -1.16
SMARCC1-207ENST00000485833 TRIT1Q9H3H1 467 aaKnown RBP7.83□□□□□ -1.16
SMARCC1-207ENST00000485833 DDX41Q9UJV9 622 aaKnown RBP7.83□□□□□ -1.16
SMARCC1-207ENST00000485833 RNF114Q9Y508 228 aa7.83□□□□□ -1.16
SMARCC1-207ENST00000485833 LRRN2O75325 713 aa7.82□□□□□ -1.16
SMARCC1-207ENST00000485833 UBOX5O94941 541 aa7.82□□□□□ -1.16
SMARCC1-207ENST00000485833 SRFP11831 508 aa7.82□□□□□ -1.16
SMARCC1-207ENST00000485833 CHMP4BP1P59074 171 aa7.82□□□□□ -1.16
SMARCC1-207ENST00000485833 RACK1P63244 317 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-207ENST00000485833 FLAD1Q8NFF5 587 aa7.82□□□□□ -1.16
SMARCC1-207ENST00000485833 DUSP15Q9H1R2 295 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms