RNA–Protein interactions for RNA: ENST00000484562.5

PATJ-207, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,448 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-207ENST00000484562 CASC4Q6P4E1 433 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 TRIM58Q8NG06 486 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 PPP4R1Q8TF05 950 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 RIOK1Q9BRS2 568 aaKnown RBP12.09□□□□□ -0.47
PATJ-207ENST00000484562 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 FAN1Q9Y2M0 1017 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 TRPM2O94759 1503 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 UFL1O94874 794 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 CD19P15391 556 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 RNASE9P60153 205 aaKnown RBP12.09□□□□□ -0.47
PATJ-207ENST00000484562 SND1Q7KZF4 910 aaKnown RBP eCLIP12.09□□□□□ -0.47
PATJ-207ENST00000484562 CABP7Q86V35 215 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 TAB2Q9NYJ8 693 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 USTQ9Y2C2 406 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 SNX14Q9Y5W7 946 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 ITGA6P23229 1130 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 NACA2Q9H009 215 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 MIS12Q9H081 205 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 ARMT1Q9H993 441 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 VPS37BQ9H9H4 285 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 GGA1Q9UJY5 639 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 EIF2AK4Q9P2K8 1649 aaKnown RBP12.09□□□□□ -0.47
PATJ-207ENST00000484562 GPAA1O43292 621 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 TRIM37O94972 964 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 STX2P32856 288 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 ELF2Q15723 593 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 PROCA1Q8NCQ7 364 aaPredicted RBP12.09□□□□□ -0.47
PATJ-207ENST00000484562 IFIH1Q9BYX4 1025 aaKnown RBP12.09□□□□□ -0.47
PATJ-207ENST00000484562 RIC8AQ9NPQ8 531 aa12.09□□□□□ -0.47
PATJ-207ENST00000484562 M0QZ92 97 aa12.08□□□□□ -0.47
PATJ-207ENST00000484562 WDR46O15213 610 aaKnown RBP12.08□□□□□ -0.47
PATJ-207ENST00000484562 RGS16O15492 202 aaPredicted RBP12.08□□□□□ -0.47
PATJ-207ENST00000484562 PRPF6O94906 941 aaKnown RBP12.08□□□□□ -0.47
PATJ-207ENST00000484562 PDE6BP35913 854 aa12.08□□□□□ -0.47
PATJ-207ENST00000484562 SLC1A4P43007 532 aa12.08□□□□□ -0.47
PATJ-207ENST00000484562 MUM1L1Q5H9M0 696 aa12.08□□□□□ -0.47
PATJ-207ENST00000484562 HAUS1Q96CS2 278 aa12.08□□□□□ -0.47
PATJ-207ENST00000484562 MRPL44Q9H9J2 332 aaKnown RBP12.08□□□□□ -0.47
PATJ-207ENST00000484562 N4BP1O75113 896 aaKnown RBP12.08□□□□□ -0.48
PATJ-207ENST00000484562 GOLGA5Q8TBA6 731 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 GCNT3O95395 438 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 CCDC170Q8IYT3 715 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 KBTBD3Q8NAB2 608 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 XAGE2Q96GT9 111 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 RILPQ96NA2 401 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 Q9H521 79 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 KLHL14Q9P2G3 628 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 TXNDC9O14530 226 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 SGSM2O43147 1006 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 TBC1D8O95759 1140 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 KRT40Q6A162 431 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 OTUD6AQ7L8S5 288 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 SUPT20HQ8NEM7 779 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 SAR1BQ9Y6B6 198 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 URB2Q14146 1524 aaKnown RBP12.08□□□□□ -0.48
PATJ-207ENST00000484562 GOLGA8KD6RF30 607 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 RPS6KA2Q15349 733 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 LONRF2Q1L5Z9 754 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 PDZD4Q76G19 769 aaPredicted RBP12.08□□□□□ -0.48
PATJ-207ENST00000484562 LPIN2Q92539 896 aa12.08□□□□□ -0.48
PATJ-207ENST00000484562 BIN2Q9UBW5 565 aaPredicted RBP12.08□□□□□ -0.48
PATJ-207ENST00000484562 H0YCG3 227 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 ZBTB7BO15156 539 aaPredicted RBP12.07□□□□□ -0.48
PATJ-207ENST00000484562 GRM1Q13255 1194 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 TSPYL6Q8N831 410 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 MAPK8IP1Q9UQF2 711 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 RIMS2Q9UQ26 1411 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 PFDN6O15212 129 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 MYCLP12524 364 aaPredicted RBP12.07□□□□□ -0.48
PATJ-207ENST00000484562 OAS2P29728 719 aaKnown RBP12.07□□□□□ -0.48
PATJ-207ENST00000484562 STAT1P42224 750 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 RSAD2Q8WXG1 361 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 RSPH3Q86UC2 560 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 PALM2Q8IXS6 379 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 BBOF1Q8ND07 529 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 IP6K1Q92551 441 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 TYW1Q9NV66 732 aaKnown RBP12.07□□□□□ -0.48
PATJ-207ENST00000484562 KRT3P12035 628 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 PPP2R5DQ14738 602 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 HADHQ16836 314 aaKnown RBP12.07□□□□□ -0.48
PATJ-207ENST00000484562 SLF1Q9BQI6 1058 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 YTHDC2Q9H6S0 1430 aaKnown RBP12.07□□□□□ -0.48
PATJ-207ENST00000484562 RAB20Q9NX57 234 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 PCDHB13Q9Y5F0 798 aa12.07□□□□□ -0.48
PATJ-207ENST00000484562 DUOX2Q9NRD8 1548 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 BIRC2Q13490 618 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 GBP5Q96PP8 586 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 TM6SF1Q9BZW5 370 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 DDX41Q9UJV9 622 aaKnown RBP12.06□□□□□ -0.48
PATJ-207ENST00000484562 HYOU1Q9Y4L1 999 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 MROH5Q6ZUA9 1318 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 LPXNO60711 386 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 MAN1A1P33908 653 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 ARHGAP4P98171 946 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 NLRX1Q86UT6 975 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 REXO1Q8N1G1 1221 aaKnown RBP12.06□□□□□ -0.48
PATJ-207ENST00000484562 FAM71BQ8TC56 605 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 TBC1D22AQ8WUA7 517 aa12.06□□□□□ -0.48
PATJ-207ENST00000484562 LRRC59Q96AG4 307 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms