RNA–Protein interactions for RNA: ENST00000482527.1

ABCB1-205, Transcript of ATP binding cassette subfamily B member 1, human

TSL 4

Gene ABCB1, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB1-205	ENST00000482527	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.81	□□□□□ -0.68
ABCB1-205	ENST00000482527	RNF26	Q9BY78	433 aa	Predicted RBP	10.81	□□□□□ -0.68
ABCB1-205	ENST00000482527	LY9	Q9HBG7	655 aa		10.81	□□□□□ -0.68
ABCB1-205	ENST00000482527	SAR1B	Q9Y6B6	198 aa		10.81	□□□□□ -0.68
ABCB1-205	ENST00000482527	NDUFB9	Q9Y6M9	179 aa		10.81	□□□□□ -0.68
ABCB1-205	ENST00000482527	SOWAHD	A6NJG2	315 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	ERVV-2	B6SEH9	535 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	APP	P05067	770 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	CALM1	P0DP23	149 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	CALM2	P0DP24	149 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	CALM3	P0DP25	149 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	PC	P11498	1178 aa	Known RBP	10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	EEF1G	P26641	437 aa	Known RBP	10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	SLC39A6	Q13433	755 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	SLC9C2	Q5TAH2	1124 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	LRRC31	Q6UY01	552 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	APTX	Q7Z2E3	356 aa	Known RBP	10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	TRAPPC11	Q7Z392	1133 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	CCDC155	Q8N6L0	562 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	FAM76A	Q8TAV0	307 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	PAGE5	Q96GU1	130 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	TRERF1	Q96PN7	1200 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	PNKP	Q96T60	521 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	DESI2	Q9BSY9	194 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	FAM204A	Q9H8W3	233 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	STRN4	Q9NRL3	753 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	SAMSN1	Q9NSI8	373 aa	Known RBP	10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	ABHD10	Q9NUJ1	306 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	UBN2	Q6ZU65	1347 aa		10.8	□□□□□ -0.68
ABCB1-205	ENST00000482527	RTL9	Q8NET4	1388 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	SRRM3	A6NNA2	597 aa	Predicted RBP	10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	VGLL3	A8MV65	326 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	FOXP2	O15409	715 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	GTPBP6	O43824	516 aa	Predicted RBP	10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	PCCA	P05165	728 aa	Predicted RBP	10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	CSF1R	P07333	972 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	ATP2B1	P20020	1258 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	CASP14	P31944	242 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	VSNL1	P62760	191 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	CDK17	Q00537	523 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	AMPD2	Q01433	879 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	DPYD	Q12882	1025 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	HSP90AB3P	Q58FF7	597 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	MFSD6	Q6ZSS7	791 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	TADA2B	Q86TJ2	420 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	CCDC47	Q96A33	483 aa	Known RBP	10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	MYCBP	Q99417	103 aa	Predicted RBP	10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	NUP88	Q99567	741 aa	Predicted RBP	10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	ISCA1	Q9BUE6	129 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	EPC1	Q9H2F5	836 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	GPHN	Q9NQX3	736 aa	Predicted RBP	10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	RBM28	Q9NW13	759 aa	Known RBP	10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	RNF14	Q9UBS8	474 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	LUC7L2	Q9Y383	392 aa	Known RBP	10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	SCN11A	Q9UI33	1791 aa		10.79	□□□□□ -0.68
ABCB1-205	ENST00000482527	BTBD18	B2RXH4	712 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	PPP1R3G	B7ZBB8	358 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	UBAP1L	F5GYI3	381 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	USO1	O60763	962 aa	Known RBP	10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	RNF40	O75150	1001 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	NDUFA10	O95299	355 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	RHOXF2B	P0C7M4	288 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	EPB41	P11171	864 aa	Known RBP	10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	CDC27	P30260	824 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	KRT2	P35908	639 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	ARHGAP25	P42331	645 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	ZAP70	P43403	619 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	TOB1	P50616	345 aa	Predicted RBP	10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	COPB1	P53618	953 aa	Known RBP	10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	GOLGA8F	Q08AF8	430 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	GOLGA8DP	Q0D2H9	430 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	MAP3K12	Q12852	859 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	PAK1	Q13153	545 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	NNT	Q13423	1086 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	TCIRG1	Q13488	830 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	WTAP	Q15007	396 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	LRRC24	Q50LG9	513 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	GLE1	Q53GS7	698 aa	Known RBP	10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	AKNAD1	Q5T1N1	836 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	CCNI2	Q6ZMN8	369 aa	Predicted RBP	10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	CYB5R4	Q7L1T6	521 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	MICU3	Q86XE3	530 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	FAM114A1	Q8IWE2	563 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	AIDA	Q96BJ3	306 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	RHOXF2	Q9BQY4	288 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	PUS7L	Q9H0K6	701 aa	Known RBP	10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	NAPB	Q9H115	298 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	RNF216	Q9NWF9	866 aa	Predicted RBP	10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	GGA2	Q9UJY4	613 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	FAM184B	Q9ULE4	1060 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	HPCAL4	Q9UM19	191 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	CDHR2	Q9BYE9	1310 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	C4A	P0C0L4	1744 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	C4B	P0C0L5	1744 aa		10.78	□□□□□ -0.68
ABCB1-205	ENST00000482527	AFDN	P55196	1824 aa	Known RBP	10.77	□□□□□ -0.68

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