RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 PYM1Q9BRP8 204 aaKnown RBP12.75□□□□□ -0.37
SMPD4-218ENST00000482171 CUTAO60888 179 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 YEATS4O95619 227 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 DDIT3P35638 169 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 MYL5Q02045 173 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 MECOMQ03112 1051 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 ZNF827Q17R98 1081 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 TBC1D10CQ8IV04 446 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 TEKT1Q969V4 418 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 LZTFL1Q9NQ48 299 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 BSDC1Q9NW68 430 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-218ENST00000482171 ZDHHC9Q9Y397 364 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 NCOA3Q9Y6Q9 1424 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 CCT6AP40227 531 aaKnown RBP12.75□□□□□ -0.37
SMPD4-218ENST00000482171 SPA17Q15506 151 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 USH1GQ495M9 461 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 CTR9Q6PD62 1173 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 TTC14Q96N46 770 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 LUC7LQ9NQ29 371 aaKnown RBP12.75□□□□□ -0.37
SMPD4-218ENST00000482171 RMND1Q9NWS8 449 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 MST1RQ04912 1400 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 NR5A1Q13285 461 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 ADALQ6DHV7 355 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 PDE6BP35913 854 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 NDUFA8P51970 172 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 IRX3P78415 501 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-218ENST00000482171 PRKG1Q13976 671 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 PPP1R12BO60237 982 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-218ENST00000482171 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-218ENST00000482171 SP4Q02446 784 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 STOX1Q6ZVD7 989 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 RASGRP4Q8TDF6 673 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 BLZF1Q9H2G9 400 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 SERTAD1Q9UHV2 236 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 CDHR2Q9BYE9 1310 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 KLRF2D3W0D1 207 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 MMP10P09238 476 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 RHOXF2BP0C7M4 288 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 PLS1Q14651 629 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 GOLGA1Q92805 767 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 RHOXF2Q9BQY4 288 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 ZBTB21Q9ULJ3 1066 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 LEMD3Q9Y2U8 911 aa12.74□□□□□ -0.37
SMPD4-218ENST00000482171 CYP2D6P10635 497 aa12.73□□□□□ -0.37
SMPD4-218ENST00000482171 GIMAP7Q8NHV1 300 aa12.73□□□□□ -0.37
SMPD4-218ENST00000482171 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMPD4-218ENST00000482171 BIN2Q9UBW5 565 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-218ENST00000482171 SPATA31A1Q5TZJ5 1347 aa12.73□□□□□ -0.37
SMPD4-218ENST00000482171 A0A0G2JLW4 131 aa12.73□□□□□ -0.37
SMPD4-218ENST00000482171 TBCAO75347 108 aaKnown RBP12.73□□□□□ -0.37
SMPD4-218ENST00000482171 IVLP07476 585 aa12.73□□□□□ -0.37
SMPD4-218ENST00000482171 MRPL12P52815 198 aaKnown RBP12.73□□□□□ -0.37
SMPD4-218ENST00000482171 GPIHBP1Q8IV16 184 aa12.73□□□□□ -0.37
SMPD4-218ENST00000482171 POTEB2H3BUK9 544 aa12.73□□□□□ -0.37
SMPD4-218ENST00000482171 SH2B2O14492 632 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-218ENST00000482171 PPEF1O14829 653 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-218ENST00000482171 RAD51AP2Q09MP3 1159 aa12.73□□□□□ -0.37
SMPD4-218ENST00000482171 RNF187Q5TA31 235 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-218ENST00000482171 SYCP3Q8IZU3 236 aa12.73□□□□□ -0.37
SMPD4-218ENST00000482171 ATP8A2Q9NTI2 1148 aa12.73□□□□□ -0.37
SMPD4-218ENST00000482171 ARHGAP23Q9P227 1491 aa12.73□□□□□ -0.37
SMPD4-218ENST00000482171 CPDO75976 1380 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 FGFR1OPO95684 399 aaKnown RBP12.72□□□□□ -0.37
SMPD4-218ENST00000482171 INF2Q27J81 1249 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 IQCEQ6IPM2 695 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 CPXCR1Q8N123 301 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 GJD4Q96KN9 370 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-218ENST00000482171 EHMT1Q9H9B1 1298 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 NEK11Q8NG66 645 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 VPS16Q9H269 839 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 SMCO2A6NFE2 343 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 GRAPQ13588 217 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 PPP2R5BQ15173 497 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 NONOQ15233 471 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMPD4-218ENST00000482171 CYB5R4Q7L1T6 521 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 MICALL1Q8N3F8 863 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 ERMNQ8TAM6 284 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 GRAPLQ8TC17 118 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-218ENST00000482171 NFE2L3Q9Y4A8 694 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-218ENST00000482171 SLIT1O75093 1534 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 SHPRHQ149N8 1683 aa12.72□□□□□ -0.37
SMPD4-218ENST00000482171 KDM6AO15550 1401 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-218ENST00000482171 KDM4FA0A1W2PPD8 638 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 CTAGE15A4D2H0 777 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 TCP10L2B9ZVM9 353 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 CHMP2AO43633 222 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 CTAGE8P0CG41 777 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 PPP2R3AQ06190 1150 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 CTAGE6Q86UF2 777 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 CTAGE4Q8IX94 777 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 CACTINQ8WUQ7 758 aaKnown RBP12.71□□□□□ -0.37
SMPD4-218ENST00000482171 FAM107BQ9H098 131 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 KIAA1468Q9P260 1216 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 CTNND2Q9UQB3 1225 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 TUBB4AP04350 444 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 NAA30Q147X3 362 aaPredicted RBP12.71□□□□□ -0.37
SMPD4-218ENST00000482171 POSTNQ15063 836 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 DLGAP5Q15398 846 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms