RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 BEGAINQ9BUH8 593 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 KRT23Q9C075 422 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 ARHGEF10LQ9HCE6 1279 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 PNMA2Q9UL42 364 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 TMX2Q9Y320 296 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 MYH6P13533 1939 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 DOCK3Q8IZD9 2030 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 ZNF213O14771 459 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 WDR46O15213 610 aaKnown RBP6.03□□□□□ -1.44
HDAC6-223ENST00000480525 TLR2O60603 784 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 TTLL1O95922 423 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 HMGB1P09429 215 aaKnown RBP6.03□□□□□ -1.44
HDAC6-223ENST00000480525 GUCY1A2P33402 732 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 GJA5P36382 358 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 CTCFP49711 727 aaPredicted RBP6.03□□□□□ -1.44
HDAC6-223ENST00000480525 PRMT2P55345 433 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 KIF23Q02241 960 aaPredicted RBP6.03□□□□□ -1.44
HDAC6-223ENST00000480525 KRT32Q14532 448 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 ARHGEF6Q15052 776 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 PKN2Q16513 984 aaKnown RBP6.03□□□□□ -1.44
HDAC6-223ENST00000480525 RNF20Q5VTR2 975 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 USP17L2Q6R6M4 530 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 MOB2Q70IA6 237 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 MIGA2Q7L4E1 593 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 MB21D1Q8N884 522 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 BRI3BPQ8WY22 251 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 ESR2Q92731 530 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 OTUD5Q96G74 571 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 GMCL1Q96IK5 515 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 MAP3K14Q99558 947 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 ELP3Q9H9T3 547 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 ADAMTS5Q9UNA0 930 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 ZHX2Q9Y6X8 837 aa6.03□□□□□ -1.44
HDAC6-223ENST00000480525 COL11A1P12107 1806 aaPredicted RBP6.02□□□□□ -1.45
HDAC6-223ENST00000480525 CCL15-CCL14A0A0B4J2E2 113 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 IGF2BP3O00425 579 aaKnown RBP eCLIP6.02□□□□□ -1.45
HDAC6-223ENST00000480525 ATP2A1O14983 1001 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 GH2P01242 217 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 APPP05067 770 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 SNHG28P0DPA3 235 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 COPB2P35606 906 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 OAZ1P54368 228 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 ANAPC15P60006 121 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 ICA1Q05084 483 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 RRP1BQ14684 758 aaKnown RBP6.02□□□□□ -1.45
HDAC6-223ENST00000480525 PPP2R5BQ15173 497 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 NECTIN1Q15223 517 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 CCL15Q16663 113 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 FAM110CQ1W6H9 321 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 DLK2Q6UY11 383 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 MFSD6Q6ZSS7 791 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 KIAA1211Q6ZU35 1233 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 IQCA1Q86XH1 822 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 ZNF444Q8N0Y2 327 aaPredicted RBP6.02□□□□□ -1.45
HDAC6-223ENST00000480525 TMTC2Q8N394 836 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.02□□□□□ -1.45
HDAC6-223ENST00000480525 LSG1Q9H089 658 aaKnown RBP6.02□□□□□ -1.45
HDAC6-223ENST00000480525 VCPKMTQ9H867 229 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 MKNK2Q9HBH9 465 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 ZFYVE28Q9HCC9 887 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 GOPCQ9HD26 462 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 RNF186Q9NXI6 227 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 MTMR4Q9NYA4 1195 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 MORF4L1Q9UBU8 362 aa6.02□□□□□ -1.45
HDAC6-223ENST00000480525 ZNFX1Q9P2E3 1918 aaKnown RBP6.01□□□□□ -1.45
HDAC6-223ENST00000480525 USP17L15C9J2P7 530 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 BTBD19C9JJ37 291 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 USP17L13C9JLJ4 530 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 USP17L11C9JVI0 530 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 USP17L18D6R9N7 530 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 USP17L22D6RA61 530 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 USP17L17D6RBQ6 530 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 USP17L19D6RCP7 530 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 USP17L20D6RJB6 530 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 CHGBP05060 677 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 CYP21A2P08686 494 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 TSPY3P0CV98 308 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 TSPY8P0CW00 308 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 BCRP11274 1271 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 SMARCA1P28370 1054 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 LIFRP42702 1097 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 USP17L24Q0WX57 530 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 TRDNQ13061 729 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 SPP2Q13103 211 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 IRF5Q13568 498 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 SART3Q15020 963 aaKnown RBP6.01□□□□□ -1.45
HDAC6-223ENST00000480525 SLFNL1Q499Z3 407 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 GPATCH4Q5T3I0 446 aaKnown RBP6.01□□□□□ -1.45
HDAC6-223ENST00000480525 VPS53Q5VIR6 699 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 GPAT2Q6NUI2 795 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 C17orf99Q6UX52 265 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 SIAH1Q8IUQ4 282 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 NCOA7Q8NI08 942 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 TMEM87BQ96K49 555 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 PTPN18Q99952 460 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 TM6SF1Q9BZW5 370 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 NBPF3Q9H094 633 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 IL25Q9H293 177 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 HOXC10Q9NYD6 342 aa6.01□□□□□ -1.45
HDAC6-223ENST00000480525 TMOD4Q9NZQ9 345 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms