RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 ELP1O95163 1332 aa15.43■□□□□ 0.06
SEC22A-205ENST00000477063 IGKV6D-41A0A0C4DH26 115 aa15.43■□□□□ 0.06
SEC22A-205ENST00000477063 SMIM22K7EJ46 135 aa15.43■□□□□ 0.06
SEC22A-205ENST00000477063 PRPF3O43395 683 aaKnown RBP15.43■□□□□ 0.06
SEC22A-205ENST00000477063 TRAK2O60296 914 aa15.43■□□□□ 0.06
SEC22A-205ENST00000477063 AKAP17AQ02040 695 aaKnown RBP15.43■□□□□ 0.06
SEC22A-205ENST00000477063 TRIM29Q14134 588 aa15.43■□□□□ 0.06
SEC22A-205ENST00000477063 KLHL40Q2TBA0 621 aa15.43■□□□□ 0.06
SEC22A-205ENST00000477063 TATDN1Q6P1N9 297 aa15.43■□□□□ 0.06
SEC22A-205ENST00000477063 PNMA1Q8ND90 353 aa15.43■□□□□ 0.06
SEC22A-205ENST00000477063 NUP133Q8WUM0 1156 aa15.43■□□□□ 0.06
SEC22A-205ENST00000477063 PRMT6Q96LA8 375 aaPredicted RBP15.43■□□□□ 0.06
SEC22A-205ENST00000477063 TRIM34Q9BYJ4 488 aa15.43■□□□□ 0.06
SEC22A-205ENST00000477063 LMBRD1Q9NUN5 540 aa15.43■□□□□ 0.06
SEC22A-205ENST00000477063 NCLP19338 710 aaKnown RBP15.42■□□□□ 0.06
SEC22A-205ENST00000477063 TNNI2P48788 182 aa15.42■□□□□ 0.06
SEC22A-205ENST00000477063 NFIAQ12857 509 aa15.42■□□□□ 0.06
SEC22A-205ENST00000477063 RESTQ13127 1097 aa15.42■□□□□ 0.06
SEC22A-205ENST00000477063 TNFAIP1Q13829 316 aa15.42■□□□□ 0.06
SEC22A-205ENST00000477063 GRM4Q14833 912 aa15.42■□□□□ 0.06
SEC22A-205ENST00000477063 TMTC3Q6ZXV5 915 aa15.42■□□□□ 0.06
SEC22A-205ENST00000477063 NBPF11Q86T75 865 aa15.42■□□□□ 0.06
SEC22A-205ENST00000477063 ZNF396Q96N95 335 aaPredicted RBP15.42■□□□□ 0.06
SEC22A-205ENST00000477063 ALG1Q9BT22 464 aa15.42■□□□□ 0.06
SEC22A-205ENST00000477063 TCHHQ07283 1943 aa15.41■□□□□ 0.06
SEC22A-205ENST00000477063 TBC1D12O60347 775 aa15.41■□□□□ 0.06
SEC22A-205ENST00000477063 LMNB1P20700 586 aa15.41■□□□□ 0.06
SEC22A-205ENST00000477063 SHMT1P34896 483 aa15.41■□□□□ 0.06
SEC22A-205ENST00000477063 EVX2Q03828 476 aa15.41■□□□□ 0.06
SEC22A-205ENST00000477063 SLC44A5Q8NCS7 719 aa15.41■□□□□ 0.06
SEC22A-205ENST00000477063 NLGN2Q8NFZ4 835 aa15.41■□□□□ 0.06
SEC22A-205ENST00000477063 TDRD3Q9H7E2 651 aaKnown RBP15.41■□□□□ 0.06
SEC22A-205ENST00000477063 MTMR4Q9NYA4 1195 aa15.41■□□□□ 0.06
SEC22A-205ENST00000477063 ZNF70Q9UC06 446 aaPredicted RBP15.41■□□□□ 0.06
SEC22A-205ENST00000477063 TTLL1O95922 423 aa15.4■□□□□ 0.06
SEC22A-205ENST00000477063 FUT2Q10981 343 aa15.4■□□□□ 0.06
SEC22A-205ENST00000477063 SAFBQ15424 915 aaKnown RBP eCLIP15.4■□□□□ 0.06
SEC22A-205ENST00000477063 TMEM47Q9BQJ4 181 aa15.4■□□□□ 0.06
SEC22A-205ENST00000477063 MYL10Q9BUA6 226 aa15.4■□□□□ 0.06
SEC22A-205ENST00000477063 SLC26A6Q9BXS9 759 aa15.4■□□□□ 0.06
SEC22A-205ENST00000477063 MYOZ2Q9NPC6 264 aa15.4■□□□□ 0.06
SEC22A-205ENST00000477063 STX8Q9UNK0 236 aa15.4■□□□□ 0.06
SEC22A-205ENST00000477063 SBF1O95248 1867 aa15.4■□□□□ 0.06
SEC22A-205ENST00000477063 RXRAP19793 462 aa15.39■□□□□ 0.05
SEC22A-205ENST00000477063 TMEM179Q6ZVK1 233 aa15.39■□□□□ 0.05
SEC22A-205ENST00000477063 ZSCAN29Q8IWY8 852 aaPredicted RBP15.39■□□□□ 0.05
SEC22A-205ENST00000477063 MKL1Q969V6 931 aa15.39■□□□□ 0.05
SEC22A-205ENST00000477063 CEP95Q96GE4 821 aa15.39■□□□□ 0.05
SEC22A-205ENST00000477063 KANSL2Q9H9L4 492 aa15.39■□□□□ 0.05
SEC22A-205ENST00000477063 SH3GLB2Q9NR46 395 aa15.39■□□□□ 0.05
SEC22A-205ENST00000477063 GINM1Q9NU53 330 aa15.39■□□□□ 0.05
SEC22A-205ENST00000477063 ISY1Q9ULR0 285 aaKnown RBP15.39■□□□□ 0.05
SEC22A-205ENST00000477063 PALM3A6NDB9 673 aaPredicted RBP15.38■□□□□ 0.05
SEC22A-205ENST00000477063 DDTLA6NHG4 134 aaPredicted RBP15.38■□□□□ 0.05
SEC22A-205ENST00000477063 hCG_1984214I3L0E3 225 aa15.38■□□□□ 0.05
SEC22A-205ENST00000477063 NMT2O60551 498 aa15.38■□□□□ 0.05
SEC22A-205ENST00000477063 PRPF40AO75400 957 aaKnown RBP15.38■□□□□ 0.05
SEC22A-205ENST00000477063 UBE2HP62256 183 aa15.38■□□□□ 0.05
SEC22A-205ENST00000477063 CERKLQ49MI3 558 aaPredicted RBP15.38■□□□□ 0.05
SEC22A-205ENST00000477063 ASPRV1Q53RT3 343 aa15.38■□□□□ 0.05
SEC22A-205ENST00000477063 FOXD4L5Q5VV16 416 aaPredicted RBP15.38■□□□□ 0.05
SEC22A-205ENST00000477063 CCDC144CPQ8IYA2 1237 aa15.38■□□□□ 0.05
SEC22A-205ENST00000477063 GPC2Q8N158 579 aa15.38■□□□□ 0.05
SEC22A-205ENST00000477063 ZNF713Q8N859 430 aaPredicted RBP15.38■□□□□ 0.05
SEC22A-205ENST00000477063 FOXD4L4Q8WXT5 416 aaPredicted RBP15.38■□□□□ 0.05
SEC22A-205ENST00000477063 PHKBQ93100 1093 aa15.38■□□□□ 0.05
SEC22A-205ENST00000477063 SPZ1Q9BXG8 430 aa15.38■□□□□ 0.05
SEC22A-205ENST00000477063 FHDC1Q9C0D6 1143 aaPredicted RBP15.38■□□□□ 0.05
SEC22A-205ENST00000477063 FOXP1Q9H334 677 aaPredicted RBP15.38■□□□□ 0.05
SEC22A-205ENST00000477063 NYAP2Q9P242 653 aa15.38■□□□□ 0.05
SEC22A-205ENST00000477063 ZBTB12Q9Y330 459 aaPredicted RBP15.38■□□□□ 0.05
SEC22A-205ENST00000477063 DDX49Q9Y6V7 483 aaKnown RBP15.38■□□□□ 0.05
SEC22A-205ENST00000477063 CNTNAP5Q8WYK1 1306 aa15.38■□□□□ 0.05
SEC22A-205ENST00000477063 WNT10BO00744 389 aa15.37■□□□□ 0.05
SEC22A-205ENST00000477063 SNHG28P0DPA3 235 aa15.37■□□□□ 0.05
SEC22A-205ENST00000477063 AKR1B1P15121 316 aa15.37■□□□□ 0.05
SEC22A-205ENST00000477063 U2AF2P26368 475 aaKnown RBP eCLIP15.37■□□□□ 0.05
SEC22A-205ENST00000477063 KIF23Q02241 960 aaPredicted RBP15.37■□□□□ 0.05
SEC22A-205ENST00000477063 MAP3K10Q02779 954 aa15.37■□□□□ 0.05
SEC22A-205ENST00000477063 DNM1Q05193 864 aaKnown RBP15.37■□□□□ 0.05
SEC22A-205ENST00000477063 SLC4A8Q2Y0W8 1093 aa15.37■□□□□ 0.05
SEC22A-205ENST00000477063 KRT40Q6A162 431 aa15.37■□□□□ 0.05
SEC22A-205ENST00000477063 SH3BP5LQ7L8J4 393 aa15.37■□□□□ 0.05
SEC22A-205ENST00000477063 RAB11FIP4Q86YS3 637 aa15.37■□□□□ 0.05
SEC22A-205ENST00000477063 SYAP1Q96A49 352 aaPredicted RBP15.37■□□□□ 0.05
SEC22A-205ENST00000477063 HOOK2Q96ED9 719 aa15.37■□□□□ 0.05
SEC22A-205ENST00000477063 CSRNP1Q96S65 589 aa15.37■□□□□ 0.05
SEC22A-205ENST00000477063 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.37■□□□□ 0.05
SEC22A-205ENST00000477063 MYH4Q9Y623 1939 aa15.37■□□□□ 0.05
SEC22A-205ENST00000477063 MMP1P03956 469 aa15.36■□□□□ 0.05
SEC22A-205ENST00000477063 PARP1P09874 1014 aaKnown RBP15.36■□□□□ 0.05
SEC22A-205ENST00000477063 RASSF7Q02833 373 aa15.36■□□□□ 0.05
SEC22A-205ENST00000477063 TCP10Q12799 353 aa15.36■□□□□ 0.05
SEC22A-205ENST00000477063 GPATCH4Q5T3I0 446 aaKnown RBP15.36■□□□□ 0.05
SEC22A-205ENST00000477063 GALNT17Q6IS24 598 aa15.36■□□□□ 0.05
SEC22A-205ENST00000477063 USP48Q86UV5 1035 aa15.36■□□□□ 0.05
SEC22A-205ENST00000477063 ZFPM1Q8IX07 1006 aa15.36■□□□□ 0.05
SEC22A-205ENST00000477063 SYT17Q9BSW7 474 aa15.36■□□□□ 0.05
SEC22A-205ENST00000477063 DNAJC18Q9H819 358 aa15.36■□□□□ 0.05
SEC22A-205ENST00000477063 BRMS1Q9HCU9 246 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms