RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 FOXD4Q12950 439 aaPredicted RBP8.65□□□□□ -1.02
LRCH3-215ENST00000476664 RAPGEF1Q13905 1077 aa8.65□□□□□ -1.02
LRCH3-215ENST00000476664 RPS26P11Q5JNZ5 115 aaPredicted RBP8.65□□□□□ -1.02
LRCH3-215ENST00000476664 MRM1Q6IN84 353 aaKnown RBP8.65□□□□□ -1.02
LRCH3-215ENST00000476664 Q6ZVU0 165 aa8.65□□□□□ -1.02
LRCH3-215ENST00000476664 TTC6Q86TZ1 520 aa8.65□□□□□ -1.02
LRCH3-215ENST00000476664 TCEAL8Q8IYN2 117 aa8.65□□□□□ -1.02
LRCH3-215ENST00000476664 TRERF1Q96PN7 1200 aa8.65□□□□□ -1.02
LRCH3-215ENST00000476664 TM9SF2Q99805 663 aa8.65□□□□□ -1.02
LRCH3-215ENST00000476664 GRIP2Q9C0E4 1043 aa8.65□□□□□ -1.02
LRCH3-215ENST00000476664 NCOA5Q9HCD5 579 aaKnown RBP8.65□□□□□ -1.02
LRCH3-215ENST00000476664 SALL4Q9UJQ4 1053 aa8.65□□□□□ -1.02
LRCH3-215ENST00000476664 LAMC1P11047 1609 aa8.65□□□□□ -1.03
LRCH3-215ENST00000476664 SIAH2O43255 324 aa8.64□□□□□ -1.03
LRCH3-215ENST00000476664 NRDCO43847 1150 aa8.64□□□□□ -1.03
LRCH3-215ENST00000476664 LRRFIP1Q32MZ4 808 aaKnown RBP8.64□□□□□ -1.03
LRCH3-215ENST00000476664 GFOD2Q3B7J2 385 aa8.64□□□□□ -1.03
LRCH3-215ENST00000476664 FAM182BQ5T319 152 aa8.64□□□□□ -1.03
LRCH3-215ENST00000476664 TMTC2Q8N394 836 aa8.64□□□□□ -1.03
LRCH3-215ENST00000476664 DNAJC5GQ8N7S2 189 aa8.64□□□□□ -1.03
LRCH3-215ENST00000476664 ZNF512BQ96KM6 892 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-215ENST00000476664 SEC31BQ9NQW1 1179 aa8.64□□□□□ -1.03
LRCH3-215ENST00000476664 INTS7Q9NVH2 962 aaKnown RBP8.64□□□□□ -1.03
LRCH3-215ENST00000476664 GPN3Q9UHW5 284 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-215ENST00000476664 ANAPC4Q9UJX5 808 aa8.64□□□□□ -1.03
LRCH3-215ENST00000476664 SLIT2O94813 1529 aa8.64□□□□□ -1.03
LRCH3-215ENST00000476664 SOS2Q07890 1332 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-215ENST00000476664 FAM205CA6NFA0 338 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 PPEF1O14829 653 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-215ENST00000476664 ADCY3O60266 1144 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 CD2BP2O95400 341 aaKnown RBP8.63□□□□□ -1.03
LRCH3-215ENST00000476664 FGAP02671 866 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 CYP2E1P05181 493 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-215ENST00000476664 ARAFP10398 606 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 CD53P19397 219 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 GUCY2CP25092 1073 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 TYRO3Q06418 890 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 CBX2Q14781 532 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-215ENST00000476664 MLC1Q15049 377 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 NBPF8Q3BBV2 869 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 FAM102BQ5T8I3 360 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 WDR78Q5VTH9 848 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 RNF219Q5W0B1 726 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-215ENST00000476664 LRRC69Q6ZNQ3 347 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 AHI1Q8N157 1196 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 PPM1KQ8N3J5 372 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 ANKLE1Q8NAG6 615 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 CHMP4CQ96CF2 233 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 IPO9Q96P70 1041 aaKnown RBP8.63□□□□□ -1.03
LRCH3-215ENST00000476664 SYT17Q9BSW7 474 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 TARS2Q9BW92 718 aaKnown RBP8.63□□□□□ -1.03
LRCH3-215ENST00000476664 ENAMQ9NRM1 1142 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 AASDHPPTQ9NRN7 309 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 SLC5A4Q9NY91 659 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 SWAP70Q9UH65 585 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 CYP8B1Q9UNU6 501 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 PCDHB5Q9Y5E4 795 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 FMN1Q68DA7 1419 aa8.63□□□□□ -1.03
LRCH3-215ENST00000476664 ADGRB2O60241 1585 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 NPHP1O15259 732 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 PAGE1O75459 146 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 ATE1O95260 518 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 EYA4O95677 639 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 HSP90AA1P07900 732 aaKnown RBP8.62□□□□□ -1.03
LRCH3-215ENST00000476664 PPP2R3AQ06190 1150 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 ITKQ08881 620 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 MORC3Q14149 939 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 MAP7Q14244 749 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 ZBTB46Q86UZ6 589 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 LRRTM3Q86VH5 581 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 OR13H1Q8NG92 308 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 WDR66Q8TBY9 1149 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 KLRG1Q96E93 195 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 MTMR8Q96EF0 704 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 CEP63Q96MT8 703 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 OSMRQ99650 979 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 SMAD5Q99717 465 aaKnown RBP8.62□□□□□ -1.03
LRCH3-215ENST00000476664 PCDHB14Q9Y5E9 798 aa8.62□□□□□ -1.03
LRCH3-215ENST00000476664 PARD3Q8TEW0 1356 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 A0A0G2JS52 829 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 AGRPO00253 132 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 GRNP28799 593 aaKnown RBP8.61□□□□□ -1.03
LRCH3-215ENST00000476664 RELBQ01201 579 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 MTMR1Q13613 665 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 LRRC14Q15048 493 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 ARSJQ5FYB0 599 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-215ENST00000476664 C10orf62Q5T681 223 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-215ENST00000476664 KANK3Q6NY19 840 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 CNNM4Q6P4Q7 775 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 RUFY4Q6ZNE9 571 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 DGKHQ86XP1 1220 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 IFNL3Q8IZI9 196 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 PAF1Q8N7H5 531 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 ZSCAN1Q8NBB4 408 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 ZKSCAN3Q9BRR0 538 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 TMEM39AQ9NV64 488 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 CFDP1Q9UEE9 299 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-215ENST00000476664 FBXO9Q9UK97 447 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-215ENST00000476664 SPEF1Q9Y4P9 236 aa8.61□□□□□ -1.03
LRCH3-215ENST00000476664 ADGRB3O60242 1522 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms