RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 DZIP1LQ8IYY4 767 aaKnown RBP8.87□□□□□ -0.99
VPS50-212ENST00000476413 JMYQ8N9B5 988 aa8.87□□□□□ -0.99
VPS50-212ENST00000476413 EZH1Q92800 747 aaPredicted RBP8.87□□□□□ -0.99
VPS50-212ENST00000476413 SLC6A18Q96N87 628 aa8.87□□□□□ -0.99
VPS50-212ENST00000476413 CEP41Q9BYV8 373 aa8.87□□□□□ -0.99
VPS50-212ENST00000476413 PCOLCE2Q9UKZ9 415 aa8.87□□□□□ -0.99
VPS50-212ENST00000476413 C9IYK1 514 aa8.86□□□□□ -0.99
VPS50-212ENST00000476413 C9orf172C9J069 976 aa8.86□□□□□ -0.99
VPS50-212ENST00000476413 DYNC1LI2O43237 492 aaPredicted RBP8.86□□□□□ -0.99
VPS50-212ENST00000476413 DIAPH1O60610 1272 aaKnown RBP8.86□□□□□ -0.99
VPS50-212ENST00000476413 LRIG2O94898 1065 aa8.86□□□□□ -0.99
VPS50-212ENST00000476413 GLB1P16278 677 aa8.86□□□□□ -0.99
VPS50-212ENST00000476413 RAB6AP20340 208 aa8.86□□□□□ -0.99
VPS50-212ENST00000476413 PMS1P54277 932 aaKnown RBP8.86□□□□□ -0.99
VPS50-212ENST00000476413 NRG1Q02297 640 aaPredicted RBP8.86□□□□□ -0.99
VPS50-212ENST00000476413 NCAPHQ15003 741 aa8.86□□□□□ -0.99
VPS50-212ENST00000476413 SGO2Q562F6 1265 aa8.86□□□□□ -0.99
VPS50-212ENST00000476413 KIAA1211LQ6NV74 962 aa8.86□□□□□ -0.99
VPS50-212ENST00000476413 SEZ6L2Q6UXD5 910 aa8.86□□□□□ -0.99
VPS50-212ENST00000476413 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.86□□□□□ -0.99
VPS50-212ENST00000476413 ST13P5Q8NFI4 369 aaPredicted RBP8.86□□□□□ -0.99
VPS50-212ENST00000476413 DNAJB8Q8NHS0 232 aa8.86□□□□□ -0.99
VPS50-212ENST00000476413 SH3TC2Q8TF17 1288 aa8.86□□□□□ -0.99
VPS50-212ENST00000476413 MEGF10Q96KG7 1140 aa8.86□□□□□ -0.99
VPS50-212ENST00000476413 SUCOQ9UBS9 1254 aaKnown RBP8.86□□□□□ -0.99
VPS50-212ENST00000476413 SLC7A5Q01650 507 aa8.85□□□□□ -0.99
VPS50-212ENST00000476413 IFRD2Q12894 506 aaPredicted RBP8.85□□□□□ -0.99
VPS50-212ENST00000476413 ARMC10Q8N2F6 343 aa8.85□□□□□ -0.99
VPS50-212ENST00000476413 XAGE3Q8WTP9 111 aa8.85□□□□□ -0.99
VPS50-212ENST00000476413 FBLIM1Q8WUP2 373 aa8.85□□□□□ -0.99
VPS50-212ENST00000476413 SCARF2Q96GP6 870 aaPredicted RBP8.85□□□□□ -0.99
VPS50-212ENST00000476413 NACC1Q96RE7 527 aa8.85□□□□□ -0.99
VPS50-212ENST00000476413 SUSD2Q9UGT4 822 aa8.85□□□□□ -0.99
VPS50-212ENST00000476413 ZMYM5Q9UJ78 669 aa8.85□□□□□ -0.99
VPS50-212ENST00000476413 RBAK-RBAKDNI3L0D1 243 aa8.84□□□□□ -0.99
VPS50-212ENST00000476413 SUSD5O60279 629 aa8.84□□□□□ -0.99
VPS50-212ENST00000476413 NFICP08651 508 aa8.84□□□□□ -0.99
VPS50-212ENST00000476413 GNPTABQ3T906 1256 aa8.84□□□□□ -0.99
VPS50-212ENST00000476413 MTERF2Q49AM1 385 aa8.84□□□□□ -0.99
VPS50-212ENST00000476413 TDRD10Q5VZ19 366 aaKnown RBP8.84□□□□□ -0.99
VPS50-212ENST00000476413 MFSD2AQ8NA29 543 aa8.84□□□□□ -0.99
VPS50-212ENST00000476413 ZNF669Q96BR6 464 aaPredicted RBP8.84□□□□□ -0.99
VPS50-212ENST00000476413 VWCEQ96DN2 955 aa8.84□□□□□ -0.99
VPS50-212ENST00000476413 SSU72Q9NP77 194 aaKnown RBP8.84□□□□□ -0.99
VPS50-212ENST00000476413 DAGLAQ9Y4D2 1042 aa8.84□□□□□ -0.99
VPS50-212ENST00000476413 SART1O43290 800 aaKnown RBP8.83□□□□□ -1
VPS50-212ENST00000476413 GAS2O43903 313 aaKnown RBP8.83□□□□□ -1
VPS50-212ENST00000476413 SLITRK5O94991 958 aa8.83□□□□□ -1
VPS50-212ENST00000476413 APBA3O96018 575 aa8.83□□□□□ -1
VPS50-212ENST00000476413 HSD3B2P26439 372 aa8.83□□□□□ -1
VPS50-212ENST00000476413 USP11P51784 963 aa8.83□□□□□ -1
VPS50-212ENST00000476413 SQSTM1Q13501 440 aa8.83□□□□□ -1
VPS50-212ENST00000476413 UVSSAQ2YD98 709 aa8.83□□□□□ -1
VPS50-212ENST00000476413 SLC10A6Q3KNW5 377 aa8.83□□□□□ -1
VPS50-212ENST00000476413 EEPD1Q7L9B9 569 aa8.83□□□□□ -1
VPS50-212ENST00000476413 RIN3Q8TB24 985 aa8.83□□□□□ -1
VPS50-212ENST00000476413 DHRS1Q96LJ7 313 aa8.83□□□□□ -1
VPS50-212ENST00000476413 PFDN2Q9UHV9 154 aa8.83□□□□□ -1
VPS50-212ENST00000476413 SBNO2Q9Y2G9 1366 aa8.83□□□□□ -1
VPS50-212ENST00000476413 GBP1P32455 592 aa8.82□□□□□ -1
VPS50-212ENST00000476413 AXDND1Q5T1B0 1012 aaPredicted RBP8.82□□□□□ -1
VPS50-212ENST00000476413 MYRFLQ96LU7 910 aa8.82□□□□□ -1
VPS50-212ENST00000476413 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.82□□□□□ -1
VPS50-212ENST00000476413 CEP131Q9UPN4 1083 aa8.82□□□□□ -1
VPS50-212ENST00000476413 CBFA2T2O43439 604 aa8.81□□□□□ -1
VPS50-212ENST00000476413 CLEC3AO75596 197 aa8.81□□□□□ -1
VPS50-212ENST00000476413 BBS9Q3SYG4 887 aa8.81□□□□□ -1
VPS50-212ENST00000476413 C2orf27AQ580R0 203 aa8.81□□□□□ -1
VPS50-212ENST00000476413 LETMD1Q6P1Q0 360 aa8.81□□□□□ -1
VPS50-212ENST00000476413 ZNF513Q8N8E2 541 aaPredicted RBP8.81□□□□□ -1
VPS50-212ENST00000476413 ZNF512BQ96KM6 892 aaPredicted RBP8.81□□□□□ -1
VPS50-212ENST00000476413 SSBP4Q9BWG4 385 aaPredicted RBP8.81□□□□□ -1
VPS50-212ENST00000476413 LGR6Q9HBX8 967 aa8.81□□□□□ -1
VPS50-212ENST00000476413 C1GALT1Q9NS00 363 aa8.81□□□□□ -1
VPS50-212ENST00000476413 FAM86C1Q9NVL1 165 aa8.81□□□□□ -1
VPS50-212ENST00000476413 TMEM260Q9NX78 707 aa8.81□□□□□ -1
VPS50-212ENST00000476413 LEMD3Q9Y2U8 911 aa8.81□□□□□ -1
VPS50-212ENST00000476413 KDM2BQ8NHM5 1336 aa8.8□□□□□ -1
VPS50-212ENST00000476413 ESYT3A0FGR9 886 aa8.8□□□□□ -1
VPS50-212ENST00000476413 SHOXO15266 292 aa8.8□□□□□ -1
VPS50-212ENST00000476413 ADCY3O60266 1144 aa8.8□□□□□ -1
VPS50-212ENST00000476413 TP53P04637 393 aaPredicted RBP8.8□□□□□ -1
VPS50-212ENST00000476413 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
VPS50-212ENST00000476413 SSRP1Q08945 709 aaKnown RBP8.8□□□□□ -1
VPS50-212ENST00000476413 NBPF12Q5TAG4 269 aaPredicted RBP8.8□□□□□ -1
VPS50-212ENST00000476413 ALYREFQ86V81 257 aaKnown RBP8.8□□□□□ -1
VPS50-212ENST00000476413 TXNRD3Q86VQ6 643 aa8.8□□□□□ -1
VPS50-212ENST00000476413 FAM20CQ8IXL6 584 aa8.8□□□□□ -1
VPS50-212ENST00000476413 THAP3Q8WTV1 239 aaPredicted RBP8.8□□□□□ -1
VPS50-212ENST00000476413 UTP4Q969X6 686 aaKnown RBP8.8□□□□□ -1
VPS50-212ENST00000476413 MIPEPQ99797 713 aa8.8□□□□□ -1
VPS50-212ENST00000476413 HAUS7Q99871 368 aa8.8□□□□□ -1
VPS50-212ENST00000476413 EPHX1P07099 455 aa8.79□□□□□ -1
VPS50-212ENST00000476413 BMP3P12645 472 aa8.79□□□□□ -1
VPS50-212ENST00000476413 MAP4P27816 1152 aaKnown RBP8.79□□□□□ -1
VPS50-212ENST00000476413 CHRNA4P43681 627 aa8.79□□□□□ -1
VPS50-212ENST00000476413 PLEKHG4Q58EX7 1191 aa8.79□□□□□ -1
VPS50-212ENST00000476413 DCAF15Q66K64 600 aa8.79□□□□□ -1
VPS50-212ENST00000476413 SMARCC1Q92922 1105 aaPredicted RBP8.79□□□□□ -1
VPS50-212ENST00000476413 KREMEN1Q96MU8 473 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms