RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 CABP5Q9NP86 173 aa19.5■□□□□ 0.71
COL1A1-205ENST00000476387 MCM9Q9NXL9 1143 aa19.5■□□□□ 0.71
COL1A1-205ENST00000476387 GJD2Q9UKL4 321 aa19.5■□□□□ 0.71
COL1A1-205ENST00000476387 MBD4O95243 580 aa19.49■□□□□ 0.71
COL1A1-205ENST00000476387 SGPL1O95470 568 aa19.49■□□□□ 0.71
COL1A1-205ENST00000476387 RAB3GAP1Q15042 981 aa19.49■□□□□ 0.71
COL1A1-205ENST00000476387 UBE3CQ15386 1083 aa19.49■□□□□ 0.71
COL1A1-205ENST00000476387 ANKRD45Q5TZF3 282 aa19.49■□□□□ 0.71
COL1A1-205ENST00000476387 LCORLQ8N3X6 602 aa19.49■□□□□ 0.71
COL1A1-205ENST00000476387 EXOC6Q8TAG9 804 aa19.49■□□□□ 0.71
COL1A1-205ENST00000476387 ARMT1Q9H993 441 aa19.49■□□□□ 0.71
COL1A1-205ENST00000476387 TXNRD2Q9NNW7 524 aa19.49■□□□□ 0.71
COL1A1-205ENST00000476387 PAK6Q9NQU5 681 aaPredicted RBP19.49■□□□□ 0.71
COL1A1-205ENST00000476387 GLRX3O76003 335 aaKnown RBP19.48■□□□□ 0.71
COL1A1-205ENST00000476387 HMGCRP04035 888 aa19.48■□□□□ 0.71
COL1A1-205ENST00000476387 MX1P20591 662 aa19.48■□□□□ 0.71
COL1A1-205ENST00000476387 MAPK4P31152 587 aa19.48■□□□□ 0.71
COL1A1-205ENST00000476387 KBTBD3Q8NAB2 608 aa19.48■□□□□ 0.71
COL1A1-205ENST00000476387 RWDD1Q9H446 243 aaPredicted RBP19.48■□□□□ 0.71
COL1A1-205ENST00000476387 DCP1AQ9NPI6 582 aaPredicted RBP19.48■□□□□ 0.71
COL1A1-205ENST00000476387 RBPJLQ9UBG7 517 aa19.48■□□□□ 0.71
COL1A1-205ENST00000476387 USP17L15C9J2P7 530 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 USP17L13C9JLJ4 530 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 USP17L11C9JVI0 530 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 USP17L18D6R9N7 530 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 USP17L22D6RA61 530 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 USP17L17D6RBQ6 530 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 USP17L19D6RCP7 530 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 USP17L20D6RJB6 530 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 FARP2O94887 1054 aaPredicted RBP19.47■□□□□ 0.71
COL1A1-205ENST00000476387 ERVK-9P63128 1117 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 ERVK-24P63145 666 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 USP17L24Q0WX57 530 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 LRRFIP1Q32MZ4 808 aaKnown RBP19.47■□□□□ 0.71
COL1A1-205ENST00000476387 SLFNL1Q499Z3 407 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 HABP4Q5JVS0 413 aaKnown RBP19.47■□□□□ 0.71
COL1A1-205ENST00000476387 SDR42E1Q8WUS8 393 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 SOCS4Q8WXH5 440 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 HTATIP2Q9BUP3 242 aa19.47■□□□□ 0.71
COL1A1-205ENST00000476387 XRCC5P13010 732 aaKnown RBP19.46■□□□□ 0.71
COL1A1-205ENST00000476387 GUCY1A2P33402 732 aa19.46■□□□□ 0.71
COL1A1-205ENST00000476387 ACER1Q8TDN7 264 aa19.46■□□□□ 0.71
COL1A1-205ENST00000476387 OTUD7AQ8TE49 926 aaPredicted RBP19.46■□□□□ 0.71
COL1A1-205ENST00000476387 DDRGK1Q96HY6 314 aa19.46■□□□□ 0.71
COL1A1-205ENST00000476387 NUDT12Q9BQG2 462 aa19.46■□□□□ 0.71
COL1A1-205ENST00000476387 CRISPLD2Q9H0B8 497 aa19.46■□□□□ 0.71
COL1A1-205ENST00000476387 ATP8A2Q9NTI2 1148 aa19.46■□□□□ 0.71
COL1A1-205ENST00000476387 SWAP70Q9UH65 585 aa19.46■□□□□ 0.71
COL1A1-205ENST00000476387 ZFYP08048 801 aaPredicted RBP19.45■□□□□ 0.7
COL1A1-205ENST00000476387 VCAM1P19320 739 aa19.45■□□□□ 0.7
COL1A1-205ENST00000476387 ZYXQ15942 572 aaKnown RBP19.45■□□□□ 0.7
COL1A1-205ENST00000476387 CATSPERGQ6ZRH7 1159 aa19.45■□□□□ 0.7
COL1A1-205ENST00000476387 AMOTL1Q8IY63 956 aa19.45■□□□□ 0.7
COL1A1-205ENST00000476387 PI4K2BQ8TCG2 481 aa19.45■□□□□ 0.7
COL1A1-205ENST00000476387 DEFB118Q96PH6 123 aa19.45■□□□□ 0.7
COL1A1-205ENST00000476387 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.45■□□□□ 0.7
COL1A1-205ENST00000476387 RABGAP1Q9Y3P9 1069 aa19.45■□□□□ 0.7
COL1A1-205ENST00000476387 PLXNB2O15031 1838 aa19.44■□□□□ 0.7
COL1A1-205ENST00000476387 H0YGN5 161 aa19.44■□□□□ 0.7
COL1A1-205ENST00000476387 TFRCP02786 760 aaKnown RBP19.44■□□□□ 0.7
COL1A1-205ENST00000476387 CHGBP05060 677 aa19.44■□□□□ 0.7
COL1A1-205ENST00000476387 SEPT2Q15019 361 aa19.44■□□□□ 0.7
COL1A1-205ENST00000476387 Q3C1V9 767 aa19.44■□□□□ 0.7
COL1A1-205ENST00000476387 POTEEQ6S8J3 1075 aa19.44■□□□□ 0.7
COL1A1-205ENST00000476387 LBX2Q6XYB7 198 aa19.44■□□□□ 0.7
COL1A1-205ENST00000476387 CCAR1Q8IX12 1150 aaKnown RBP19.44■□□□□ 0.7
COL1A1-205ENST00000476387 TRMT44Q8IYL2 757 aaKnown RBP19.44■□□□□ 0.7
COL1A1-205ENST00000476387 DPF3Q92784 378 aa19.44■□□□□ 0.7
COL1A1-205ENST00000476387 PAGR1Q9BTK6 254 aa19.44■□□□□ 0.7
COL1A1-205ENST00000476387 PEX10O60683 326 aa19.43■□□□□ 0.7
COL1A1-205ENST00000476387 CCNA1P78396 465 aa19.43■□□□□ 0.7
COL1A1-205ENST00000476387 TMEM179Q6ZVK1 233 aa19.43■□□□□ 0.7
COL1A1-205ENST00000476387 TRIB2Q92519 343 aa19.43■□□□□ 0.7
COL1A1-205ENST00000476387 APPBP2Q92624 585 aa19.43■□□□□ 0.7
COL1A1-205ENST00000476387 FSD1Q9BTV5 496 aa19.43■□□□□ 0.7
COL1A1-205ENST00000476387 PUS7LQ9H0K6 701 aaKnown RBP19.43■□□□□ 0.7
COL1A1-205ENST00000476387 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
COL1A1-205ENST00000476387 RPTORQ8N122 1335 aa19.43■□□□□ 0.7
COL1A1-205ENST00000476387 SALL3Q9BXA9 1300 aa19.43■□□□□ 0.7
COL1A1-205ENST00000476387 RNF113AO15541 343 aaKnown RBP19.42■□□□□ 0.7
COL1A1-205ENST00000476387 PRKAB2O43741 272 aa19.42■□□□□ 0.7
COL1A1-205ENST00000476387 CYP2D6P10635 497 aa19.42■□□□□ 0.7
COL1A1-205ENST00000476387 EVX2Q03828 476 aa19.42■□□□□ 0.7
COL1A1-205ENST00000476387 GPR142Q7Z601 462 aa19.42■□□□□ 0.7
COL1A1-205ENST00000476387 PLEKHH3Q7Z736 793 aa19.42■□□□□ 0.7
COL1A1-205ENST00000476387 USP6NLQ92738 828 aa19.42■□□□□ 0.7
COL1A1-205ENST00000476387 PORCNQ9H237 461 aa19.42■□□□□ 0.7
COL1A1-205ENST00000476387 HMX1Q9NP08 348 aaPredicted RBP19.42■□□□□ 0.7
COL1A1-205ENST00000476387 PCDH10Q9P2E7 1040 aa19.42■□□□□ 0.7
COL1A1-205ENST00000476387 MPHOSPH10O00566 681 aaKnown RBP19.41■□□□□ 0.7
COL1A1-205ENST00000476387 CNMDO75829 334 aa19.41■□□□□ 0.7
COL1A1-205ENST00000476387 CYP2B6P20813 491 aa19.41■□□□□ 0.7
COL1A1-205ENST00000476387 RGS2P41220 211 aa19.41■□□□□ 0.7
COL1A1-205ENST00000476387 MORN1Q5T089 497 aa19.41■□□□□ 0.7
COL1A1-205ENST00000476387 MAP3K21Q5TCX8 1036 aa19.41■□□□□ 0.7
COL1A1-205ENST00000476387 SMC5Q8IY18 1101 aa19.41■□□□□ 0.7
COL1A1-205ENST00000476387 ANKLE1Q8NAG6 615 aa19.41■□□□□ 0.7
COL1A1-205ENST00000476387 SLC44A5Q8NCS7 719 aa19.41■□□□□ 0.7
COL1A1-205ENST00000476387 LNPKQ9C0E8 428 aa19.41■□□□□ 0.7
COL1A1-205ENST00000476387 RPAP3Q9H6T3 665 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms