RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 C16orf86Q6ZW13 317 aa25.39■■□□□ 1.66
LIME1-204ENST00000476183 CHD1LQ86WJ1 897 aa25.39■■□□□ 1.66
LIME1-204ENST00000476183 AMOTL1Q8IY63 956 aa25.39■■□□□ 1.66
LIME1-204ENST00000476183 TAOK2Q9UL54 1235 aa25.39■■□□□ 1.66
LIME1-204ENST00000476183 GIMAP6Q6P9H5 292 aa25.38■■□□□ 1.65
LIME1-204ENST00000476183 ARMC5Q96C12 935 aa25.38■■□□□ 1.65
LIME1-204ENST00000476183 C12orf42Q96LP6 360 aa25.38■■□□□ 1.65
LIME1-204ENST00000476183 P2RX7Q99572 595 aaKnown RBP25.38■■□□□ 1.65
LIME1-204ENST00000476183 FEZ1Q99689 392 aa25.38■■□□□ 1.65
LIME1-204ENST00000476183 KIAA1683Q9H0B3 1180 aa25.38■■□□□ 1.65
LIME1-204ENST00000476183 ARPP21Q9UBL0 812 aaPredicted RBP25.38■■□□□ 1.65
LIME1-204ENST00000476183 SRRDQ9UH36 339 aa25.38■■□□□ 1.65
LIME1-204ENST00000476183 BRCA2P51587 3418 aa25.37■■□□□ 1.65
LIME1-204ENST00000476183 SBK1Q52WX2 424 aa25.37■■□□□ 1.65
LIME1-204ENST00000476183 EVI5LQ96CN4 794 aa25.37■■□□□ 1.65
LIME1-204ENST00000476183 KIAA0100Q14667 2235 aaKnown RBP25.36■■□□□ 1.65
LIME1-204ENST00000476183 DOCK3Q8IZD9 2030 aa25.36■■□□□ 1.65
LIME1-204ENST00000476183 A0A1W2PRG0 241 aa25.36■■□□□ 1.65
LIME1-204ENST00000476183 GNAT2P19087 354 aa25.36■■□□□ 1.65
LIME1-204ENST00000476183 GCLCP48506 637 aaPredicted RBP25.36■■□□□ 1.65
LIME1-204ENST00000476183 FCGRTP55899 365 aa25.36■■□□□ 1.65
LIME1-204ENST00000476183 IRX3P78415 501 aaPredicted RBP25.36■■□□□ 1.65
LIME1-204ENST00000476183 FAM110CQ1W6H9 321 aa25.36■■□□□ 1.65
LIME1-204ENST00000476183 TMEM179Q6ZVK1 233 aa25.36■■□□□ 1.65
LIME1-204ENST00000476183 CLEC10AQ8IUN9 316 aa25.36■■□□□ 1.65
LIME1-204ENST00000476183 PATL2C9JE40 543 aaKnown RBP25.35■■□□□ 1.65
LIME1-204ENST00000476183 PEX10O60683 326 aa25.35■■□□□ 1.65
LIME1-204ENST00000476183 PRMT2P55345 433 aa25.35■■□□□ 1.65
LIME1-204ENST00000476183 SIAH1Q8IUQ4 282 aa25.35■■□□□ 1.65
LIME1-204ENST00000476183 PLEKHM2Q8IWE5 1019 aa25.35■■□□□ 1.65
LIME1-204ENST00000476183 MYPNQ86TC9 1320 aa25.35■■□□□ 1.65
LIME1-204ENST00000476183 HOXD10P28358 340 aa25.34■■□□□ 1.65
LIME1-204ENST00000476183 USP14P54578 494 aa25.34■■□□□ 1.65
LIME1-204ENST00000476183 HERVK_113P62684 666 aa25.34■■□□□ 1.65
LIME1-204ENST00000476183 PRKCZQ05513 592 aa25.34■■□□□ 1.65
LIME1-204ENST00000476183 SLC9C1Q4G0N8 1177 aa25.34■■□□□ 1.65
LIME1-204ENST00000476183 POTEEQ6S8J3 1075 aa25.34■■□□□ 1.65
LIME1-204ENST00000476183 CCDC129Q6ZRS4 1044 aa25.34■■□□□ 1.65
LIME1-204ENST00000476183 GABRQQ9UN88 632 aa25.34■■□□□ 1.65
LIME1-204ENST00000476183 MINDY4BA8MYZ0 360 aa25.33■■□□□ 1.65
LIME1-204ENST00000476183 APPP05067 770 aa25.33■■□□□ 1.65
LIME1-204ENST00000476183 VCAM1P19320 739 aa25.33■■□□□ 1.65
LIME1-204ENST00000476183 TDO2P48775 406 aa25.33■■□□□ 1.65
LIME1-204ENST00000476183 IFNL3Q8IZI9 196 aa25.33■■□□□ 1.65
LIME1-204ENST00000476183 STK11IPQ8N1F8 1099 aa25.33■■□□□ 1.65
LIME1-204ENST00000476183 SH3TC2Q8TF17 1288 aa25.33■■□□□ 1.65
LIME1-204ENST00000476183 ZNF333Q96JL9 665 aa25.33■■□□□ 1.65
LIME1-204ENST00000476183 CCDC17Q96LX7 622 aa25.33■■□□□ 1.65
LIME1-204ENST00000476183 TXNRD2Q9NNW7 524 aa25.33■■□□□ 1.65
LIME1-204ENST00000476183 ROBO3Q96MS0 1386 aa25.32■■□□□ 1.64
LIME1-204ENST00000476183 FOXP2O15409 715 aa25.32■■□□□ 1.64
LIME1-204ENST00000476183 MORF4L1Q9UBU8 362 aa25.32■■□□□ 1.64
LIME1-204ENST00000476183 TNPO2O14787 897 aaKnown RBP25.31■■□□□ 1.64
LIME1-204ENST00000476183 KIAA1755Q5JYT7 1200 aa25.31■■□□□ 1.64
LIME1-204ENST00000476183 CATSPERGQ6ZRH7 1159 aa25.31■■□□□ 1.64
LIME1-204ENST00000476183 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.31■■□□□ 1.64
LIME1-204ENST00000476183 OSBPL3Q9H4L5 887 aa25.31■■□□□ 1.64
LIME1-204ENST00000476183 RBPJLQ9UBG7 517 aa25.31■■□□□ 1.64
LIME1-204ENST00000476183 USP17L15C9J2P7 530 aa25.3■■□□□ 1.64
LIME1-204ENST00000476183 USP17L13C9JLJ4 530 aa25.3■■□□□ 1.64
LIME1-204ENST00000476183 USP17L11C9JVI0 530 aa25.3■■□□□ 1.64
LIME1-204ENST00000476183 USP17L18D6R9N7 530 aa25.3■■□□□ 1.64
LIME1-204ENST00000476183 USP17L22D6RA61 530 aa25.3■■□□□ 1.64
LIME1-204ENST00000476183 USP17L17D6RBQ6 530 aa25.3■■□□□ 1.64
LIME1-204ENST00000476183 USP17L19D6RCP7 530 aa25.3■■□□□ 1.64
LIME1-204ENST00000476183 USP17L20D6RJB6 530 aa25.3■■□□□ 1.64
LIME1-204ENST00000476183 RASA1P20936 1047 aa25.3■■□□□ 1.64
LIME1-204ENST00000476183 MLLT1Q03111 559 aaPredicted RBP25.3■■□□□ 1.64
LIME1-204ENST00000476183 ICA1Q05084 483 aa25.3■■□□□ 1.64
LIME1-204ENST00000476183 USP17L24Q0WX57 530 aa25.3■■□□□ 1.64
LIME1-204ENST00000476183 RAET1EQ8TD07 263 aa25.3■■□□□ 1.64
LIME1-204ENST00000476183 TNRC18O15417 2968 aaPredicted RBP25.3■■□□□ 1.64
LIME1-204ENST00000476183 GREB1LQ9C091 1923 aaPredicted RBP25.29■■□□□ 1.64
LIME1-204ENST00000476183 POTEFA5A3E0 1075 aa25.29■■□□□ 1.64
LIME1-204ENST00000476183 TRIM6-TRIM34B2RNG4 842 aa25.29■■□□□ 1.64
LIME1-204ENST00000476183 NBPF11Q86T75 865 aa25.29■■□□□ 1.64
LIME1-204ENST00000476183 FAM227BQ96M60 508 aa25.29■■□□□ 1.64
LIME1-204ENST00000476183 RPAP3Q9H6T3 665 aaPredicted RBP25.29■■□□□ 1.64
LIME1-204ENST00000476183 A0A0D9SFI3 127 aa25.28■■□□□ 1.64
LIME1-204ENST00000476183 FLT3LGP49771 235 aa25.28■■□□□ 1.64
LIME1-204ENST00000476183 Q3C1V9 767 aa25.28■■□□□ 1.64
LIME1-204ENST00000476183 VPS53Q5VIR6 699 aa25.28■■□□□ 1.64
LIME1-204ENST00000476183 NACAP1Q9BZK3 213 aa25.28■■□□□ 1.64
LIME1-204ENST00000476183 HELLSQ9NRZ9 838 aa25.28■■□□□ 1.64
LIME1-204ENST00000476183 TMX2Q9Y320 296 aa25.28■■□□□ 1.64
LIME1-204ENST00000476183 RBBP6Q7Z6E9 1792 aaKnown RBP25.27■■□□□ 1.64
LIME1-204ENST00000476183 MYCP01106 439 aaPredicted RBP25.27■■□□□ 1.64
LIME1-204ENST00000476183 EEF2P13639 858 aaKnown RBP25.27■■□□□ 1.64
LIME1-204ENST00000476183 GRK4P32298 578 aa25.27■■□□□ 1.64
LIME1-204ENST00000476183 GPRC5AQ8NFJ5 357 aa25.27■■□□□ 1.64
LIME1-204ENST00000476183 RILPL2Q969X0 211 aa25.27■■□□□ 1.64
LIME1-204ENST00000476183 NAPBQ9H115 298 aa25.27■■□□□ 1.64
LIME1-204ENST00000476183 MKNK2Q9HBH9 465 aa25.27■■□□□ 1.64
LIME1-204ENST00000476183 ARHGEF10LQ9HCE6 1279 aa25.27■■□□□ 1.64
LIME1-204ENST00000476183 PRDM1O75626 825 aa25.26■■□□□ 1.63
LIME1-204ENST00000476183 CNMDO75829 334 aa25.26■■□□□ 1.63
LIME1-204ENST00000476183 PDE4AP27815 886 aa25.26■■□□□ 1.63
LIME1-204ENST00000476183 GTF3C2Q8WUA4 911 aaPredicted RBP25.26■■□□□ 1.63
LIME1-204ENST00000476183 COA7Q96BR5 231 aa25.26■■□□□ 1.63
LIME1-204ENST00000476183 PAGR1Q9BTK6 254 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms