RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 UPK3BL1B0FP48 263 aa8.09□□□□□ -1.11
PRKD3-208ENST00000475912 FAM155AB1AL88 458 aaPredicted RBP8.09□□□□□ -1.11
PRKD3-208ENST00000475912 UPK3BL2E5RIL1 263 aa8.09□□□□□ -1.11
PRKD3-208ENST00000475912 TLR3O15455 904 aaKnown RBP8.09□□□□□ -1.11
PRKD3-208ENST00000475912 CBX7O95931 251 aa8.09□□□□□ -1.11
PRKD3-208ENST00000475912 ZNF865P0CJ78 1059 aaPredicted RBP8.09□□□□□ -1.11
PRKD3-208ENST00000475912 CLCN7P51798 805 aa8.09□□□□□ -1.11
PRKD3-208ENST00000475912 ZNF792Q3KQV3 632 aa8.09□□□□□ -1.11
PRKD3-208ENST00000475912 ZNF746Q6NUN9 644 aaPredicted RBP8.09□□□□□ -1.11
PRKD3-208ENST00000475912 FBXL19Q6PCT2 694 aa8.09□□□□□ -1.11
PRKD3-208ENST00000475912 C22orf34Q6ZV56 151 aa8.09□□□□□ -1.11
PRKD3-208ENST00000475912 HS2ST1Q7LGA3 356 aa8.09□□□□□ -1.11
PRKD3-208ENST00000475912 MFSD4AQ8N468 514 aa8.09□□□□□ -1.11
PRKD3-208ENST00000475912 FAM13CQ8NE31 585 aa8.09□□□□□ -1.11
PRKD3-208ENST00000475912 IKZF1Q13422 519 aa8.08□□□□□ -1.12
PRKD3-208ENST00000475912 MPP2Q14168 576 aa8.08□□□□□ -1.12
PRKD3-208ENST00000475912 TMEM201Q5SNT2 666 aa8.08□□□□□ -1.12
PRKD3-208ENST00000475912 ANGEL2Q5VTE6 544 aaKnown RBP8.08□□□□□ -1.12
PRKD3-208ENST00000475912 CDKAL1Q5VV42 579 aa8.08□□□□□ -1.12
PRKD3-208ENST00000475912 FAM196AQ6ZSG2 479 aa8.08□□□□□ -1.12
PRKD3-208ENST00000475912 ASB11Q8WXH4 323 aa8.08□□□□□ -1.12
PRKD3-208ENST00000475912 ADAMTS6Q9UKP5 1117 aa8.08□□□□□ -1.12
PRKD3-208ENST00000475912 CAPN6Q9Y6Q1 641 aa8.08□□□□□ -1.12
PRKD3-208ENST00000475912 ZNF608Q9ULD9 1512 aaPredicted RBP8.08□□□□□ -1.12
PRKD3-208ENST00000475912 PITPNM2Q9BZ72 1349 aa8.07□□□□□ -1.12
PRKD3-208ENST00000475912 HTR3BO95264 441 aa8.07□□□□□ -1.12
PRKD3-208ENST00000475912 EIF4A3P38919 411 aaKnown RBP8.07□□□□□ -1.12
PRKD3-208ENST00000475912 TRIM26Q12899 539 aaPredicted RBP8.07□□□□□ -1.12
PRKD3-208ENST00000475912 LDLRAD1Q5T700 205 aa8.07□□□□□ -1.12
PRKD3-208ENST00000475912 REC114Q7Z4M0 266 aa8.07□□□□□ -1.12
PRKD3-208ENST00000475912 TMEM87AQ8NBN3 555 aa8.07□□□□□ -1.12
PRKD3-208ENST00000475912 DNAJB8Q8NHS0 232 aa8.07□□□□□ -1.12
PRKD3-208ENST00000475912 HSPA12BQ96MM6 686 aa8.07□□□□□ -1.12
PRKD3-208ENST00000475912 MBNL3Q9NUK0 354 aaKnown RBP8.07□□□□□ -1.12
PRKD3-208ENST00000475912 REV1Q9UBZ9 1251 aa8.07□□□□□ -1.12
PRKD3-208ENST00000475912 KLHL3Q9UH77 587 aa8.07□□□□□ -1.12
PRKD3-208ENST00000475912 PRR36Q9H6K5 1346 aa8.06□□□□□ -1.12
PRKD3-208ENST00000475912 RNASE1P07998 156 aaKnown RBP8.06□□□□□ -1.12
PRKD3-208ENST00000475912 CYP7A1P22680 504 aa8.06□□□□□ -1.12
PRKD3-208ENST00000475912 PI4K2BQ8TCG2 481 aa8.06□□□□□ -1.12
PRKD3-208ENST00000475912 PRDM7Q9NQW5 492 aa8.06□□□□□ -1.12
PRKD3-208ENST00000475912 KCNQ5Q9NR82 932 aa8.06□□□□□ -1.12
PRKD3-208ENST00000475912 SEMA3GQ9NS98 782 aa8.06□□□□□ -1.12
PRKD3-208ENST00000475912 SUPT16HQ9Y5B9 1047 aaKnown RBP8.06□□□□□ -1.12
PRKD3-208ENST00000475912 H3BS24 57 aa8.05□□□□□ -1.12
PRKD3-208ENST00000475912 PAX4O43316 350 aa8.05□□□□□ -1.12
PRKD3-208ENST00000475912 ETV3P41162 512 aa8.05□□□□□ -1.12
PRKD3-208ENST00000475912 YARSP54577 528 aaKnown RBP8.05□□□□□ -1.12
PRKD3-208ENST00000475912 PPP1R13LQ8WUF5 828 aa8.05□□□□□ -1.12
PRKD3-208ENST00000475912 CYB5D2Q8WUJ1 264 aa8.05□□□□□ -1.12
PRKD3-208ENST00000475912 ZNF296Q8WUU4 475 aaPredicted RBP8.05□□□□□ -1.12
PRKD3-208ENST00000475912 RC3H2Q9HBD1 1191 aaKnown RBP8.05□□□□□ -1.12
PRKD3-208ENST00000475912 ADAMTS1Q9UHI8 967 aa8.05□□□□□ -1.12
PRKD3-208ENST00000475912 CEP131Q9UPN4 1083 aa8.05□□□□□ -1.12
PRKD3-208ENST00000475912 ST14Q9Y5Y6 855 aa8.05□□□□□ -1.12
PRKD3-208ENST00000475912 CFTRP13569 1480 aa8.05□□□□□ -1.12
PRKD3-208ENST00000475912 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
PRKD3-208ENST00000475912 GREM1O60565 184 aa8.04□□□□□ -1.12
PRKD3-208ENST00000475912 DNAJA2O60884 412 aa8.04□□□□□ -1.12
PRKD3-208ENST00000475912 ITGB5P18084 799 aa8.04□□□□□ -1.12
PRKD3-208ENST00000475912 KIR3DL1P43629 444 aa8.04□□□□□ -1.12
PRKD3-208ENST00000475912 ZP2Q05996 745 aa8.04□□□□□ -1.12
PRKD3-208ENST00000475912 TNK2Q07912 1038 aa8.04□□□□□ -1.12
PRKD3-208ENST00000475912 CWF19L2Q2TBE0 894 aaKnown RBP8.04□□□□□ -1.12
PRKD3-208ENST00000475912 COX4I2Q96KJ9 171 aa8.04□□□□□ -1.12
PRKD3-208ENST00000475912 LRRC3Q9BY71 257 aa8.04□□□□□ -1.12
PRKD3-208ENST00000475912 BACH2Q9BYV9 841 aa8.04□□□□□ -1.12
PRKD3-208ENST00000475912 BRMS1Q9HCU9 246 aa8.04□□□□□ -1.12
PRKD3-208ENST00000475912 ATP13A1Q9HD20 1204 aa8.04□□□□□ -1.12
PRKD3-208ENST00000475912 RBM47A0AV96 593 aaKnown RBP8.03□□□□□ -1.12
PRKD3-208ENST00000475912 CRKP46108 304 aa8.03□□□□□ -1.12
PRKD3-208ENST00000475912 SLFN12Q8IYM2 578 aa8.03□□□□□ -1.12
PRKD3-208ENST00000475912 LRRN4CLQ8ND94 238 aa8.03□□□□□ -1.12
PRKD3-208ENST00000475912 PCDHB14Q9Y5E9 798 aa8.03□□□□□ -1.12
PRKD3-208ENST00000475912 ROBO2Q9HCK4 1378 aa8.02□□□□□ -1.13
PRKD3-208ENST00000475912 ZNF76P36508 570 aa8.02□□□□□ -1.13
PRKD3-208ENST00000475912 SLC23A3Q6PIS1 610 aa8.02□□□□□ -1.13
PRKD3-208ENST00000475912 BAHD1Q8TBE0 780 aaPredicted RBP8.02□□□□□ -1.13
PRKD3-208ENST00000475912 UBE2FQ969M7 185 aa8.02□□□□□ -1.13
PRKD3-208ENST00000475912 Q96M66 194 aa8.02□□□□□ -1.13
PRKD3-208ENST00000475912 CARS2Q9HA77 564 aaKnown RBP8.02□□□□□ -1.13
PRKD3-208ENST00000475912 UBP1Q9NZI7 540 aa8.02□□□□□ -1.13
PRKD3-208ENST00000475912 RNF114Q9Y508 228 aa8.02□□□□□ -1.13
PRKD3-208ENST00000475912 PAPLNO95428 1278 aa8.01□□□□□ -1.13
PRKD3-208ENST00000475912 TNNI2P48788 182 aa8.01□□□□□ -1.13
PRKD3-208ENST00000475912 ZSWIM5Q9P217 1185 aa8.01□□□□□ -1.13
PRKD3-208ENST00000475912 WIZO95785 1651 aa8.01□□□□□ -1.13
PRKD3-208ENST00000475912 IFT140Q96RY7 1462 aa8□□□□□ -1.13
PRKD3-208ENST00000475912 JUNBP17275 347 aaPredicted RBP8□□□□□ -1.13
PRKD3-208ENST00000475912 FANCCQ00597 558 aa8□□□□□ -1.13
PRKD3-208ENST00000475912 SEZ6Q53EL9 994 aa8□□□□□ -1.13
PRKD3-208ENST00000475912 THAP5Q7Z6K1 395 aa8□□□□□ -1.13
PRKD3-208ENST00000475912 PHACTR4Q8IZ21 702 aa8□□□□□ -1.13
PRKD3-208ENST00000475912 PIWIL2Q8TC59 973 aaKnown RBP8□□□□□ -1.13
PRKD3-208ENST00000475912 RSF1Q96T23 1441 aaPredicted RBP8□□□□□ -1.13
PRKD3-208ENST00000475912 EIF4G3O43432 1585 aaKnown RBP7.99□□□□□ -1.13
PRKD3-208ENST00000475912 APOBRQ0VD83 1088 aa7.99□□□□□ -1.13
PRKD3-208ENST00000475912 CCDC74BQ96LY2 380 aa7.99□□□□□ -1.13
PRKD3-208ENST00000475912 FMNL2Q96PY5 1086 aa7.99□□□□□ -1.13
PRKD3-208ENST00000475912 KIF2CQ99661 725 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms