RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
LTN1-204ENST00000475344 HTR3BO95264 441 aa8.04□□□□□ -1.12
LTN1-204ENST00000475344 ZNF16P17020 682 aaPredicted RBP8.04□□□□□ -1.12
LTN1-204ENST00000475344 EIF4A3P38919 411 aaKnown RBP8.04□□□□□ -1.12
LTN1-204ENST00000475344 FAM196AQ6ZSG2 479 aa8.04□□□□□ -1.12
LTN1-204ENST00000475344 REC114Q7Z4M0 266 aa8.04□□□□□ -1.12
LTN1-204ENST00000475344 PHACTR4Q8IZ21 702 aa8.04□□□□□ -1.12
LTN1-204ENST00000475344 CYB5D2Q8WUJ1 264 aa8.04□□□□□ -1.12
LTN1-204ENST00000475344 COX4I2Q96KJ9 171 aa8.04□□□□□ -1.12
LTN1-204ENST00000475344 FMNL2Q96PY5 1086 aa8.04□□□□□ -1.12
LTN1-204ENST00000475344 SUPT16HQ9Y5B9 1047 aaKnown RBP8.04□□□□□ -1.12
LTN1-204ENST00000475344 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.03□□□□□ -1.12
LTN1-204ENST00000475344 GARTP22102 1010 aa8.03□□□□□ -1.12
LTN1-204ENST00000475344 CWF19L2Q2TBE0 894 aaKnown RBP8.03□□□□□ -1.12
LTN1-204ENST00000475344 TMEM201Q5SNT2 666 aa8.03□□□□□ -1.12
LTN1-204ENST00000475344 ATG4DQ86TL0 474 aaPredicted RBP8.03□□□□□ -1.12
LTN1-204ENST00000475344 DNAJB8Q8NHS0 232 aa8.03□□□□□ -1.12
LTN1-204ENST00000475344 CHMP4BP1P59074 171 aa8.02□□□□□ -1.13
LTN1-204ENST00000475344 BAHD1Q8TBE0 780 aaPredicted RBP8.02□□□□□ -1.13
LTN1-204ENST00000475344 PPP1R13LQ8WUF5 828 aa8.02□□□□□ -1.13
LTN1-204ENST00000475344 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
LTN1-204ENST00000475344 WASH4PA8MWX3 477 aa8.01□□□□□ -1.13
LTN1-204ENST00000475344 ZNF296Q8WUU4 475 aaPredicted RBP8.01□□□□□ -1.13
LTN1-204ENST00000475344 FAM168AQ92567 244 aa8.01□□□□□ -1.13
LTN1-204ENST00000475344 Q96M66 194 aa8.01□□□□□ -1.13
LTN1-204ENST00000475344 BRMS1Q9HCU9 246 aa8.01□□□□□ -1.13
LTN1-204ENST00000475344 PCDHB14Q9Y5E9 798 aa8.01□□□□□ -1.13
LTN1-204ENST00000475344 DNAJA2O60884 412 aa8□□□□□ -1.13
LTN1-204ENST00000475344 MLECQ14165 292 aa8□□□□□ -1.13
LTN1-204ENST00000475344 SLFN12Q8IYM2 578 aa8□□□□□ -1.13
LTN1-204ENST00000475344 CCDC74BQ96LY2 380 aa8□□□□□ -1.13
LTN1-204ENST00000475344 KIF2CQ99661 725 aa8□□□□□ -1.13
LTN1-204ENST00000475344 LMCD1Q9NZU5 365 aa8□□□□□ -1.13
LTN1-204ENST00000475344 PRR36Q9H6K5 1346 aa8□□□□□ -1.13
LTN1-204ENST00000475344 GBP1P32455 592 aa7.99□□□□□ -1.13
LTN1-204ENST00000475344 MCM4P33991 863 aa7.99□□□□□ -1.13
LTN1-204ENST00000475344 OGFOD2Q6N063 350 aa7.99□□□□□ -1.13
LTN1-204ENST00000475344 THAP5Q7Z6K1 395 aa7.99□□□□□ -1.13
LTN1-204ENST00000475344 PIWIL2Q8TC59 973 aaKnown RBP7.99□□□□□ -1.13
LTN1-204ENST00000475344 UBP1Q9NZI7 540 aa7.99□□□□□ -1.13
LTN1-204ENST00000475344 ADAMTS1Q9UHI8 967 aa7.99□□□□□ -1.13
LTN1-204ENST00000475344 KCNH3Q9ULD8 1083 aa7.99□□□□□ -1.13
LTN1-204ENST00000475344 CARMIL2Q6F5E8 1435 aa7.98□□□□□ -1.13
LTN1-204ENST00000475344 LRRN2O75325 713 aa7.98□□□□□ -1.13
LTN1-204ENST00000475344 TPP2P29144 1249 aaPredicted RBP7.98□□□□□ -1.13
LTN1-204ENST00000475344 CRKP46108 304 aa7.98□□□□□ -1.13
LTN1-204ENST00000475344 SEZ6Q53EL9 994 aa7.98□□□□□ -1.13
LTN1-204ENST00000475344 GK5Q6ZS86 529 aa7.98□□□□□ -1.13
LTN1-204ENST00000475344 CREG2Q8IUH2 290 aa7.98□□□□□ -1.13
LTN1-204ENST00000475344 TRIT1Q9H3H1 467 aaKnown RBP7.98□□□□□ -1.13
LTN1-204ENST00000475344 GOLGA2P5Q9HBQ8 144 aa7.98□□□□□ -1.13
LTN1-204ENST00000475344 SLAMF8Q9P0V8 285 aa7.98□□□□□ -1.13
LTN1-204ENST00000475344 CTNND2Q9UQB3 1225 aa7.98□□□□□ -1.13
LTN1-204ENST00000475344 ROBO2Q9HCK4 1378 aa7.97□□□□□ -1.13
LTN1-204ENST00000475344 GREM1O60565 184 aa7.97□□□□□ -1.13
LTN1-204ENST00000475344 RAG1P15918 1043 aa7.97□□□□□ -1.13
LTN1-204ENST00000475344 APOBRQ0VD83 1088 aa7.97□□□□□ -1.13
LTN1-204ENST00000475344 KCNMB1Q16558 191 aa7.97□□□□□ -1.13
LTN1-204ENST00000475344 ARSHQ5FYA8 562 aa7.97□□□□□ -1.13
LTN1-204ENST00000475344 DTWD2Q8NBA8 298 aa7.97□□□□□ -1.13
LTN1-204ENST00000475344 KREMEN1Q96MU8 473 aa7.97□□□□□ -1.13
LTN1-204ENST00000475344 BACH2Q9BYV9 841 aa7.97□□□□□ -1.13
LTN1-204ENST00000475344 ZNF76P36508 570 aa7.96□□□□□ -1.14
LTN1-204ENST00000475344 FLAD1Q8NFF5 587 aa7.96□□□□□ -1.14
LTN1-204ENST00000475344 RNF141Q8WVD5 230 aa7.96□□□□□ -1.14
LTN1-204ENST00000475344 ALPK1Q96QP1 1244 aa7.96□□□□□ -1.14
LTN1-204ENST00000475344 KRTAP4-12Q9BQ66 201 aa7.96□□□□□ -1.14
LTN1-204ENST00000475344 LRRC3Q9BY71 257 aa7.96□□□□□ -1.14
LTN1-204ENST00000475344 DUSP15Q9H1R2 295 aaPredicted RBP7.96□□□□□ -1.14
LTN1-204ENST00000475344 KCNQ5Q9NR82 932 aa7.96□□□□□ -1.14
LTN1-204ENST00000475344 GPATCH2Q9NW75 528 aa7.96□□□□□ -1.14
LTN1-204ENST00000475344 DUSP13Q9UII6 198 aa7.96□□□□□ -1.14
LTN1-204ENST00000475344 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.96□□□□□ -1.14
LTN1-204ENST00000475344 SLC22A31A6NKX4 558 aa7.95□□□□□ -1.14
LTN1-204ENST00000475344 FYB2Q5VWT5 728 aa7.95□□□□□ -1.14
LTN1-204ENST00000475344 TMPRSS7Q7RTY8 843 aa7.95□□□□□ -1.14
LTN1-204ENST00000475344 ZSWIM9Q86XI8 627 aa7.95□□□□□ -1.14
LTN1-204ENST00000475344 NKD1Q969G9 470 aa7.95□□□□□ -1.14
LTN1-204ENST00000475344 ESR1P03372 595 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 LTKP29376 864 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 AFMP43652 599 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 HK2P52789 917 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 CLCQ05315 142 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 RALGPS1Q5JS13 557 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 LDLRAD1Q5T700 205 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 OVOS1Q6IE37 1185 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 USP48Q86UV5 1035 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 KIAA0825Q8IV33 1275 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 SPON2Q9BUD6 331 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 GMIPQ9P107 970 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 PCDHGB7Q9Y5F8 929 aa7.94□□□□□ -1.14
LTN1-204ENST00000475344 DNAJC25-GNG10A0A024R161 153 aa7.93□□□□□ -1.14
LTN1-204ENST00000475344 POLR2BP30876 1174 aaKnown RBP7.93□□□□□ -1.14
LTN1-204ENST00000475344 CLEC16AQ2KHT3 1053 aa7.93□□□□□ -1.14
LTN1-204ENST00000475344 ZNF394Q53GI3 561 aa7.93□□□□□ -1.14
LTN1-204ENST00000475344 TTC6Q86TZ1 520 aa7.93□□□□□ -1.14
LTN1-204ENST00000475344 KIRREL1Q96J84 757 aa7.93□□□□□ -1.14
LTN1-204ENST00000475344 ASPNQ9BXN1 380 aa7.93□□□□□ -1.14
LTN1-204ENST00000475344 GPR62Q9BZJ7 368 aa7.93□□□□□ -1.14
LTN1-204ENST00000475344 C19orf73Q9NVV2 129 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms