RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 ZNF395Q9H8N7 513 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 NOP53Q9NZM5 478 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 BLOC1S6Q9UL45 172 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 AKAP2Q9Y2D5 859 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 RRP15Q9Y3B9 282 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 CFAP43Q8NDM7 1665 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 GPR25O00155 361 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 MYBL2P10244 700 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 MX2P20592 715 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 FLT3P36888 993 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 GRIK3Q13003 919 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 CRYMQ14894 314 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 NFE2L2Q16236 605 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 HIF1AQ16665 826 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 KLHL40Q2TBA0 621 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 MFSD4BQ5TF39 518 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 TAX1BP1Q86VP1 789 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 TEKT1Q969V4 418 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 AIDAQ96BJ3 306 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 TRIM6Q9C030 488 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 POLMQ9NP87 494 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 JADE2Q9NQC1 790 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 TMEM63CQ9P1W3 806 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 CTTNBP2Q8WZ74 1663 aa6.93□□□□□ -1.3
ECHDC1-215ENST00000475319 GADD45BO75293 160 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 NEBLO76041 1014 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 SNUPNO95149 360 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 ECEL1O95672 775 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 COPB2P35606 906 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 NCBP1Q09161 790 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 RSPO4Q2I0M5 234 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 C4orf17Q53FE4 359 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 GNASQ5JWF2 1037 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 NAIF1Q69YI7 327 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 TTC19Q6DKK2 380 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 PDE12Q6L8Q7 609 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 NFXL1Q6ZNB6 911 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 IQCF2Q8IXL9 164 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 CMTR1Q8N1G2 835 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 CCDC191Q8NCU4 936 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 RNF214Q8ND24 703 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 FBXO18Q8NFZ0 1043 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 EXOC6Q8TAG9 804 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 ZNF837Q96EG3 531 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 MRFAP1L1Q96HT8 127 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 SPON2Q9BUD6 331 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 OXCT2Q9BYC2 517 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 FAM107BQ9H098 131 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 IRF2BPLQ9H1B7 796 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 SUV39H2Q9H5I1 410 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 ELP3Q9H9T3 547 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 FNDC3AQ9Y2H6 1198 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 RTCBQ9Y3I0 505 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 MYOM3Q5VTT5 1437 aa6.92□□□□□ -1.3
ECHDC1-215ENST00000475319 UBAP1LF5GYI3 381 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 F6X3S4 739 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 GNB5O14775 395 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 SSBP05455 408 aaKnown RBP eCLIP6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 GCFC2P16383 781 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 ALDH1B1P30837 517 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 INPP5BP32019 993 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 MAP2K3P46734 347 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 TRPC1P48995 793 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 SFSWAPQ12872 951 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 SERINC3Q13530 473 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 NEDD9Q14511 834 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 CCDC178Q5BJE1 867 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 IER5Q5VY09 327 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 ZNF408Q9H9D4 720 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 PSD3Q9NYI0 1048 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 SUGT1Q9Y2Z0 365 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 KCNMB2Q9Y691 235 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 KDM2BQ8NHM5 1336 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 VIRMAQ69YN4 1812 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 NCOA2Q15596 1464 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 VCAM1P19320 739 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 ARSDP51689 593 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 SESN3P58005 492 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 GRM2Q14416 872 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 PTPROQ16827 1216 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 TBC1D25Q3MII6 688 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 SLC27A3Q5K4L6 730 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 ZFYVE27Q5T4F4 411 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 HHATQ5VTY9 493 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 CAVIN1Q6NZI2 390 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 LINC00114Q6XXX2 140 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 KIAA0825Q8IV33 1275 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 GPT2Q8TD30 523 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 TCP11Q8WWU5 503 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 CCDC34Q96HJ3 373 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 SEC16BQ96JE7 1060 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 TRIM7Q9C029 511 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 GRIP2Q9C0E4 1043 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 CHRDQ9H2X0 955 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 GNL3LQ9NVN8 582 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 ADAMTS1Q9UHI8 967 aa6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 TTF2Q9UNY4 1162 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 THRAP3Q9Y2W1 955 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms