RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 AKR1B1P15121 316 aa19.67■□□□□ 0.74
ATG4B-216ENST00000475195 LACTBP83111 547 aaPredicted RBP19.67■□□□□ 0.74
ATG4B-216ENST00000475195 OTOP1Q7RTM1 612 aa19.67■□□□□ 0.74
ATG4B-216ENST00000475195 CD99L2Q8TCZ2 262 aa19.67■□□□□ 0.74
ATG4B-216ENST00000475195 ACER1Q8TDN7 264 aa19.67■□□□□ 0.74
ATG4B-216ENST00000475195 CPA4Q9UI42 421 aa19.67■□□□□ 0.74
ATG4B-216ENST00000475195 PNMA3Q9UL41 463 aa19.67■□□□□ 0.74
ATG4B-216ENST00000475195 MYH8P13535 1937 aa19.66■□□□□ 0.74
ATG4B-216ENST00000475195 A0A1W2PRG0 241 aa19.66■□□□□ 0.74
ATG4B-216ENST00000475195 HIP1O00291 1037 aa19.66■□□□□ 0.74
ATG4B-216ENST00000475195 GSPT1P15170 499 aaKnown RBP19.66■□□□□ 0.74
ATG4B-216ENST00000475195 RASA1P20936 1047 aa19.66■□□□□ 0.74
ATG4B-216ENST00000475195 USP14P54578 494 aa19.66■□□□□ 0.74
ATG4B-216ENST00000475195 ARHGEF6Q15052 776 aa19.66■□□□□ 0.74
ATG4B-216ENST00000475195 VPS53Q5VIR6 699 aa19.66■□□□□ 0.74
ATG4B-216ENST00000475195 CENPQQ7L2Z9 268 aaPredicted RBP19.66■□□□□ 0.74
ATG4B-216ENST00000475195 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.66■□□□□ 0.74
ATG4B-216ENST00000475195 NAPBQ9H115 298 aa19.66■□□□□ 0.74
ATG4B-216ENST00000475195 ASCC2Q9H1I8 757 aaPredicted RBP19.66■□□□□ 0.74
ATG4B-216ENST00000475195 ANAPC4Q9UJX5 808 aa19.66■□□□□ 0.74
ATG4B-216ENST00000475195 MPHOSPH10O00566 681 aaKnown RBP19.65■□□□□ 0.74
ATG4B-216ENST00000475195 HSPD1P10809 573 aaKnown RBP19.65■□□□□ 0.74
ATG4B-216ENST00000475195 OSBPP22059 807 aa19.65■□□□□ 0.74
ATG4B-216ENST00000475195 FBXO46Q6PJ61 603 aaPredicted RBP19.65■□□□□ 0.74
ATG4B-216ENST00000475195 ZNF589Q86UQ0 364 aaPredicted RBP19.65■□□□□ 0.74
ATG4B-216ENST00000475195 EFCC1Q9HA90 598 aa19.65■□□□□ 0.74
ATG4B-216ENST00000475195 ZNF287Q9HBT7 754 aa19.65■□□□□ 0.74
ATG4B-216ENST00000475195 TMX2Q9Y320 296 aa19.65■□□□□ 0.74
ATG4B-216ENST00000475195 GNRH1P01148 92 aa19.64■□□□□ 0.73
ATG4B-216ENST00000475195 FGAP02671 866 aa19.64■□□□□ 0.73
ATG4B-216ENST00000475195 GCLCP48506 637 aaPredicted RBP19.64■□□□□ 0.73
ATG4B-216ENST00000475195 PPARAQ07869 468 aa19.64■□□□□ 0.73
ATG4B-216ENST00000475195 KANSL2Q9H9L4 492 aa19.64■□□□□ 0.73
ATG4B-216ENST00000475195 MKNK2Q9HBH9 465 aa19.64■□□□□ 0.73
ATG4B-216ENST00000475195 TRIM17Q9Y577 477 aa19.64■□□□□ 0.73
ATG4B-216ENST00000475195 ZMYM6O95789 1325 aa19.64■□□□□ 0.73
ATG4B-216ENST00000475195 GREB1LQ9C091 1923 aaPredicted RBP19.63■□□□□ 0.73
ATG4B-216ENST00000475195 CCDC171Q6TFL3 1326 aa19.63■□□□□ 0.73
ATG4B-216ENST00000475195 FGRP09769 529 aa19.63■□□□□ 0.73
ATG4B-216ENST00000475195 CTGFP29279 349 aa19.63■□□□□ 0.73
ATG4B-216ENST00000475195 MFAP1P55081 439 aaKnown RBP19.63■□□□□ 0.73
ATG4B-216ENST00000475195 CATSPERGQ6ZRH7 1159 aa19.63■□□□□ 0.73
ATG4B-216ENST00000475195 P2RX7Q99572 595 aaKnown RBP19.63■□□□□ 0.73
ATG4B-216ENST00000475195 PTPN22Q9Y2R2 807 aa19.63■□□□□ 0.73
ATG4B-216ENST00000475195 IGKV6D-41A0A0C4DH26 115 aa19.62■□□□□ 0.73
ATG4B-216ENST00000475195 KIF22Q14807 665 aa19.62■□□□□ 0.73
ATG4B-216ENST00000475195 CWC27Q6UX04 472 aaKnown RBP19.62■□□□□ 0.73
ATG4B-216ENST00000475195 ZNF444Q8N0Y2 327 aaPredicted RBP19.62■□□□□ 0.73
ATG4B-216ENST00000475195 SMCR8Q8TEV9 937 aaPredicted RBP19.62■□□□□ 0.73
ATG4B-216ENST00000475195 FEZ1Q99689 392 aa19.62■□□□□ 0.73
ATG4B-216ENST00000475195 USP17L15C9J2P7 530 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 USP17L13C9JLJ4 530 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 USP17L11C9JVI0 530 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 USP17L18D6R9N7 530 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 USP17L22D6RA61 530 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 USP17L17D6RBQ6 530 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 USP17L19D6RCP7 530 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 USP17L20D6RJB6 530 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 SLC3A2P08195 630 aaKnown RBP19.61■□□□□ 0.73
ATG4B-216ENST00000475195 VCAM1P19320 739 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 ICA1Q05084 483 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 PDE4BQ07343 736 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 USP17L24Q0WX57 530 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 FAM110CQ1W6H9 321 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 ARHGAP39Q9C0H5 1083 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 ARHGEF10LQ9HCE6 1279 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 DIAPH3Q9NSV4 1193 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 MORF4L1Q9UBU8 362 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 HPS5Q9UPZ3 1129 aa19.61■□□□□ 0.73
ATG4B-216ENST00000475195 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.61■□□□□ 0.73
ATG4B-216ENST00000475195 EEF2P13639 858 aaKnown RBP19.6■□□□□ 0.73
ATG4B-216ENST00000475195 PSMC4P43686 418 aa19.6■□□□□ 0.73
ATG4B-216ENST00000475195 PRMT2P55345 433 aa19.6■□□□□ 0.73
ATG4B-216ENST00000475195 IRX3P78415 501 aaPredicted RBP19.6■□□□□ 0.73
ATG4B-216ENST00000475195 ZYXQ15942 572 aaKnown RBP19.6■□□□□ 0.73
ATG4B-216ENST00000475195 KIAA1755Q5JYT7 1200 aa19.6■□□□□ 0.73
ATG4B-216ENST00000475195 POTEEQ6S8J3 1075 aa19.6■□□□□ 0.73
ATG4B-216ENST00000475195 STK11IPQ8N1F8 1099 aa19.6■□□□□ 0.73
ATG4B-216ENST00000475195 NEDD1Q8NHV4 660 aa19.6■□□□□ 0.73
ATG4B-216ENST00000475195 LPAR1Q92633 364 aa19.6■□□□□ 0.73
ATG4B-216ENST00000475195 MKL1Q969V6 931 aa19.6■□□□□ 0.73
ATG4B-216ENST00000475195 TRIM47Q96LD4 638 aa19.6■□□□□ 0.73
ATG4B-216ENST00000475195 SH2D4AQ9H788 454 aa19.6■□□□□ 0.73
ATG4B-216ENST00000475195 NYAP2Q9P242 653 aa19.6■□□□□ 0.73
ATG4B-216ENST00000475195 PRDM1O75626 825 aa19.59■□□□□ 0.73
ATG4B-216ENST00000475195 HERVK_113P62684 666 aa19.59■□□□□ 0.73
ATG4B-216ENST00000475195 LBX2Q6XYB7 198 aa19.59■□□□□ 0.73
ATG4B-216ENST00000475195 CLEC10AQ8IUN9 316 aa19.59■□□□□ 0.73
ATG4B-216ENST00000475195 ANKRD13CQ8N6S4 541 aa19.59■□□□□ 0.73
ATG4B-216ENST00000475195 GTF3C2Q8WUA4 911 aaPredicted RBP19.59■□□□□ 0.73
ATG4B-216ENST00000475195 VCPKMTQ9H867 229 aa19.59■□□□□ 0.73
ATG4B-216ENST00000475195 RBPJLQ9UBG7 517 aa19.59■□□□□ 0.73
ATG4B-216ENST00000475195 TACC3Q9Y6A5 838 aa19.59■□□□□ 0.73
ATG4B-216ENST00000475195 SYNPO2Q9UMS6 1093 aa19.58■□□□□ 0.72
ATG4B-216ENST00000475195 HTTP42858 3142 aa19.58■□□□□ 0.72
ATG4B-216ENST00000475195 PLIN4Q96Q06 1357 aa19.57■□□□□ 0.72
ATG4B-216ENST00000475195 ORC4O43929 436 aa19.57■□□□□ 0.72
ATG4B-216ENST00000475195 CHMLP26374 656 aa19.57■□□□□ 0.72
ATG4B-216ENST00000475195 HOXD10P28358 340 aa19.57■□□□□ 0.72
ATG4B-216ENST00000475195 CTDSPL2Q05D32 466 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms