RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 POLR2BP30876 1174 aaKnown RBP5.95□□□□□ -1.46
PRPF3-204ENST00000470824 GNPTABQ3T906 1256 aa5.95□□□□□ -1.46
PRPF3-204ENST00000470824 PRAMEF13Q5VWM6 474 aa5.95□□□□□ -1.46
PRPF3-204ENST00000470824 EGFLAMQ63HQ2 1017 aa5.95□□□□□ -1.46
PRPF3-204ENST00000470824 KIAA1211LQ6NV74 962 aa5.95□□□□□ -1.46
PRPF3-204ENST00000470824 EEPD1Q7L9B9 569 aa5.95□□□□□ -1.46
PRPF3-204ENST00000470824 LILRB2Q8N423 598 aa5.95□□□□□ -1.46
PRPF3-204ENST00000470824 MFSD2AQ8NA29 543 aa5.95□□□□□ -1.46
PRPF3-204ENST00000470824 CYB5D2Q8WUJ1 264 aa5.95□□□□□ -1.46
PRPF3-204ENST00000470824 ZNF669Q96BR6 464 aaPredicted RBP5.95□□□□□ -1.46
PRPF3-204ENST00000470824 PUS7Q96PZ0 661 aaKnown RBP5.95□□□□□ -1.46
PRPF3-204ENST00000470824 DPH2Q9BQC3 489 aaPredicted RBP5.95□□□□□ -1.46
PRPF3-204ENST00000470824 YIPF2Q9BWQ6 316 aa5.95□□□□□ -1.46
PRPF3-204ENST00000470824 ZNF214Q9UL59 606 aaPredicted RBP5.95□□□□□ -1.46
PRPF3-204ENST00000470824 PCDHB10Q9UN67 800 aa5.95□□□□□ -1.46
PRPF3-204ENST00000470824 ANKRD62A6NC57 917 aa5.94□□□□□ -1.46
PRPF3-204ENST00000470824 PREPP48147 710 aa5.94□□□□□ -1.46
PRPF3-204ENST00000470824 PMS1P54277 932 aaKnown RBP5.94□□□□□ -1.46
PRPF3-204ENST00000470824 UBE3DQ7Z6J8 389 aa5.94□□□□□ -1.46
PRPF3-204ENST00000470824 BAHD1Q8TBE0 780 aaPredicted RBP5.94□□□□□ -1.46
PRPF3-204ENST00000470824 SH3TC2Q8TF17 1288 aa5.94□□□□□ -1.46
PRPF3-204ENST00000470824 WFDC12Q8WWY7 111 aa5.94□□□□□ -1.46
PRPF3-204ENST00000470824 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.94□□□□□ -1.46
PRPF3-204ENST00000470824 ACSS3Q9H6R3 686 aa5.94□□□□□ -1.46
PRPF3-204ENST00000470824 SUCOQ9UBS9 1254 aaKnown RBP5.94□□□□□ -1.46
PRPF3-204ENST00000470824 ENPP3O14638 875 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 CLEC3AO75596 197 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 UBOX5O94941 541 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 HMGB1P09429 215 aaKnown RBP5.93□□□□□ -1.46
PRPF3-204ENST00000470824 RAB6AP20340 208 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 IREB2P48200 963 aaKnown RBP5.93□□□□□ -1.46
PRPF3-204ENST00000470824 TCEAL1Q15170 157 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 MRM1Q6IN84 353 aaKnown RBP5.93□□□□□ -1.46
PRPF3-204ENST00000470824 Q6ZS46 218 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 ARMCX6Q7L4S7 300 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 TMEM192Q8IY95 271 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 XAGE3Q8WTP9 111 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 KLHL6Q8WZ60 621 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 SLC6A18Q96N87 628 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 EPN3Q9H201 632 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 DAGLAQ9Y4D2 1042 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 KDM2BQ8NHM5 1336 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 SBNO2Q9Y2G9 1366 aa5.93□□□□□ -1.46
PRPF3-204ENST00000470824 IQCA1LA6NCM1 817 aa5.92□□□□□ -1.46
PRPF3-204ENST00000470824 MSTNO14793 375 aa5.92□□□□□ -1.46
PRPF3-204ENST00000470824 NAT2P11245 290 aa5.92□□□□□ -1.46
PRPF3-204ENST00000470824 NOS3P29474 1203 aa5.92□□□□□ -1.46
PRPF3-204ENST00000470824 SSRP1Q08945 709 aaKnown RBP5.92□□□□□ -1.46
PRPF3-204ENST00000470824 MAP7Q14244 749 aa5.92□□□□□ -1.46
PRPF3-204ENST00000470824 PLA2G4EQ3MJ16 856 aa5.92□□□□□ -1.46
PRPF3-204ENST00000470824 CDPF1Q6NVV7 123 aa5.92□□□□□ -1.46
PRPF3-204ENST00000470824 ZNF662Q6ZS27 426 aa5.92□□□□□ -1.46
PRPF3-204ENST00000470824 SPATC1Q76KD6 591 aa5.92□□□□□ -1.46
PRPF3-204ENST00000470824 ALYREFQ86V81 257 aaKnown RBP5.92□□□□□ -1.46
PRPF3-204ENST00000470824 THAP3Q8WTV1 239 aaPredicted RBP5.92□□□□□ -1.46
PRPF3-204ENST00000470824 SMARCC1Q92922 1105 aaPredicted RBP5.92□□□□□ -1.46
PRPF3-204ENST00000470824 FAM46AQ96IP4 442 aaKnown RBP5.92□□□□□ -1.46
PRPF3-204ENST00000470824 UBL7Q96S82 380 aaPredicted RBP5.92□□□□□ -1.46
PRPF3-204ENST00000470824 PFDN2Q9UHV9 154 aa5.92□□□□□ -1.46
PRPF3-204ENST00000470824 ZMYM5Q9UJ78 669 aa5.92□□□□□ -1.46
PRPF3-204ENST00000470824 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.92□□□□□ -1.46
PRPF3-204ENST00000470824 CEP131Q9UPN4 1083 aa5.92□□□□□ -1.46
PRPF3-204ENST00000470824 SUSD5O60279 629 aa5.91□□□□□ -1.46
PRPF3-204ENST00000470824 NFICP08651 508 aa5.91□□□□□ -1.46
PRPF3-204ENST00000470824 COL8A1P27658 744 aa5.91□□□□□ -1.46
PRPF3-204ENST00000470824 ZNF143P52747 638 aaPredicted RBP5.91□□□□□ -1.46
PRPF3-204ENST00000470824 UVSSAQ2YD98 709 aa5.91□□□□□ -1.46
PRPF3-204ENST00000470824 HOMER1Q86YM7 354 aa5.91□□□□□ -1.46
PRPF3-204ENST00000470824 FBLIM1Q8WUP2 373 aa5.91□□□□□ -1.46
PRPF3-204ENST00000470824 APPBP2Q92624 585 aa5.91□□□□□ -1.46
PRPF3-204ENST00000470824 DCAF5Q96JK2 942 aa5.91□□□□□ -1.46
PRPF3-204ENST00000470824 APBA2Q99767 749 aa5.91□□□□□ -1.46
PRPF3-204ENST00000470824 SEMA6CQ9H3T2 930 aa5.91□□□□□ -1.46
PRPF3-204ENST00000470824 CWC22Q9HCG8 908 aaKnown RBP5.91□□□□□ -1.46
PRPF3-204ENST00000470824 FANCLQ9NW38 375 aa5.91□□□□□ -1.46
PRPF3-204ENST00000470824 ANKRD34BA5PLL1 514 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 AGRPO00253 132 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 DIAPH1O60610 1272 aaKnown RBP5.9□□□□□ -1.46
PRPF3-204ENST00000470824 CDC45O75419 566 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 TP53P04637 393 aaPredicted RBP5.9□□□□□ -1.46
PRPF3-204ENST00000470824 HSP90B1P14625 803 aaKnown RBP5.9□□□□□ -1.46
PRPF3-204ENST00000470824 RXRBP28702 533 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 ADGRE1Q14246 886 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 MBTPS1Q14703 1052 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 SLC10A6Q3KNW5 377 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 SGO2Q562F6 1265 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 C2orf27AQ580R0 203 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 PLEKHG4Q58EX7 1191 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 LETMD1Q6P1Q0 360 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.9□□□□□ -1.46
PRPF3-204ENST00000470824 CCDC144CPQ8IYA2 1237 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 JMYQ8N9B5 988 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 PPP1R13LQ8WUF5 828 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 EZH1Q92800 747 aaPredicted RBP5.9□□□□□ -1.46
PRPF3-204ENST00000470824 UTP4Q969X6 686 aaKnown RBP5.9□□□□□ -1.46
PRPF3-204ENST00000470824 MIPEPQ99797 713 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 SPOCK3Q9BQ16 436 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 LGR6Q9HBX8 967 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 FAM86C1Q9NVL1 165 aa5.9□□□□□ -1.46
PRPF3-204ENST00000470824 ESYT3A0FGR9 886 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms