RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 CYB5D2Q8WUJ1 264 aa9.01□□□□□ -0.97
SSB-209ENST00000470621 FMNL2Q96PY5 1086 aa9.01□□□□□ -0.97
SSB-209ENST00000470621 PRDM5Q9NQX1 630 aaPredicted RBP9.01□□□□□ -0.97
SSB-209ENST00000470621 GMIPQ9P107 970 aa9.01□□□□□ -0.97
SSB-209ENST00000470621 ZNRF3Q9ULT6 936 aa9.01□□□□□ -0.97
SSB-209ENST00000470621 TPX2Q9ULW0 747 aaKnown RBP9.01□□□□□ -0.97
SSB-209ENST00000470621 EFR3BQ9Y2G0 817 aa9.01□□□□□ -0.97
SSB-209ENST00000470621 INPP5FQ9Y2H2 1132 aa9.01□□□□□ -0.97
SSB-209ENST00000470621 POLR2BP30876 1174 aaKnown RBP9□□□□□ -0.97
SSB-209ENST00000470621 GRIK1P39086 918 aa9□□□□□ -0.97
SSB-209ENST00000470621 TXKP42681 527 aa9□□□□□ -0.97
SSB-209ENST00000470621 IRAK1P51617 712 aa9□□□□□ -0.97
SSB-209ENST00000470621 KIF2CQ99661 725 aa9□□□□□ -0.97
SSB-209ENST00000470621 KRTAP4-8A0A0G2JLE6 195 aa8.99□□□□□ -0.97
SSB-209ENST00000470621 PHACTR4Q8IZ21 702 aa8.99□□□□□ -0.97
SSB-209ENST00000470621 TMEM40Q8WWA1 233 aa8.99□□□□□ -0.97
SSB-209ENST00000470621 ATG4CQ96DT6 458 aa8.99□□□□□ -0.97
SSB-209ENST00000470621 FERD3LQ96RJ6 166 aa8.99□□□□□ -0.97
SSB-209ENST00000470621 TINF2Q9BSI4 451 aa8.99□□□□□ -0.97
SSB-209ENST00000470621 CAPN10Q9HC96 672 aa8.99□□□□□ -0.97
SSB-209ENST00000470621 PLAGL2Q9UPG8 496 aa8.99□□□□□ -0.97
SSB-209ENST00000470621 MAPK8IP1Q9UQF2 711 aa8.99□□□□□ -0.97
SSB-209ENST00000470621 MEIS3P2A8K0S8 358 aa8.98□□□□□ -0.97
SSB-209ENST00000470621 ADAMTS4O75173 837 aa8.98□□□□□ -0.97
SSB-209ENST00000470621 CEACAM5P06731 702 aa8.98□□□□□ -0.97
SSB-209ENST00000470621 SOX9P48436 509 aa8.98□□□□□ -0.97
SSB-209ENST00000470621 INTS5Q6P9B9 1019 aaKnown RBP8.98□□□□□ -0.97
SSB-209ENST00000470621 GTF2IRD1Q9UHL9 959 aa8.98□□□□□ -0.97
SSB-209ENST00000470621 IGF2BP3O00425 579 aaKnown RBP eCLIP8.97□□□□□ -0.97
SSB-209ENST00000470621 NASPP49321 788 aaPredicted RBP8.97□□□□□ -0.97
SSB-209ENST00000470621 FBXW10Q5XX13 1052 aa8.97□□□□□ -0.97
SSB-209ENST00000470621 NLRC3Q7RTR2 1065 aa8.97□□□□□ -0.97
SSB-209ENST00000470621 DTX1Q86Y01 620 aa8.97□□□□□ -0.97
SSB-209ENST00000470621 CCDC74BQ96LY2 380 aa8.97□□□□□ -0.97
SSB-209ENST00000470621 CNNM2Q9H8M5 875 aa8.97□□□□□ -0.97
SSB-209ENST00000470621 CEP131Q9UPN4 1083 aa8.97□□□□□ -0.97
SSB-209ENST00000470621 OAS3Q9Y6K5 1087 aaKnown RBP8.97□□□□□ -0.97
SSB-209ENST00000470621 UBOX5O94941 541 aa8.96□□□□□ -0.98
SSB-209ENST00000470621 RAG1P15918 1043 aa8.96□□□□□ -0.98
SSB-209ENST00000470621 GP2P55259 537 aaKnown RBP8.96□□□□□ -0.98
SSB-209ENST00000470621 MLECQ14165 292 aa8.96□□□□□ -0.98
SSB-209ENST00000470621 NKPD1Q17RQ9 610 aa8.96□□□□□ -0.98
SSB-209ENST00000470621 SFRP5Q5T4F7 317 aa8.96□□□□□ -0.98
SSB-209ENST00000470621 CDCP2Q5VXM1 449 aa8.96□□□□□ -0.98
SSB-209ENST00000470621 ARHGAP27Q6ZUM4 889 aa8.96□□□□□ -0.98
SSB-209ENST00000470621 SPACA3Q8IXA5 215 aa8.96□□□□□ -0.98
SSB-209ENST00000470621 NETO1Q8TDF5 533 aa8.96□□□□□ -0.98
SSB-209ENST00000470621 CBX7O95931 251 aa8.95□□□□□ -0.98
SSB-209ENST00000470621 ACRP10323 421 aa8.95□□□□□ -0.98
SSB-209ENST00000470621 NME1P15531 152 aaKnown RBP8.95□□□□□ -0.98
SSB-209ENST00000470621 NFXL1Q6ZNB6 911 aa8.95□□□□□ -0.98
SSB-209ENST00000470621 RUFY4Q6ZNE9 571 aa8.95□□□□□ -0.98
SSB-209ENST00000470621 LSRQ86X29 649 aaPredicted RBP8.95□□□□□ -0.98
SSB-209ENST00000470621 Q96M66 194 aa8.95□□□□□ -0.98
SSB-209ENST00000470621 MKNK2Q9HBH9 465 aa8.95□□□□□ -0.98
SSB-209ENST00000470621 FAM86C2PA6NEL3 165 aa8.94□□□□□ -0.98
SSB-209ENST00000470621 RGS13O14921 159 aa8.94□□□□□ -0.98
SSB-209ENST00000470621 ZNF865P0CJ78 1059 aaPredicted RBP8.94□□□□□ -0.98
SSB-209ENST00000470621 TAL1P17542 331 aaPredicted RBP8.94□□□□□ -0.98
SSB-209ENST00000470621 COL9A2Q14055 689 aaPredicted RBP8.94□□□□□ -0.98
SSB-209ENST00000470621 WFDC3Q8IUB2 231 aa8.94□□□□□ -0.98
SSB-209ENST00000470621 SPATA32Q96LK8 384 aa8.94□□□□□ -0.98
SSB-209ENST00000470621 CAPN6Q9Y6Q1 641 aa8.94□□□□□ -0.98
SSB-209ENST00000470621 GNAT3A8MTJ3 354 aa8.93□□□□□ -0.98
SSB-209ENST00000470621 TNFRSF10CO14798 259 aa8.93□□□□□ -0.98
SSB-209ENST00000470621 ATF4P18848 351 aaPredicted RBP8.93□□□□□ -0.98
SSB-209ENST00000470621 GBP1P32455 592 aa8.93□□□□□ -0.98
SSB-209ENST00000470621 CD96P40200 585 aa8.93□□□□□ -0.98
SSB-209ENST00000470621 ETV3P41162 512 aa8.93□□□□□ -0.98
SSB-209ENST00000470621 IFI16Q16666 785 aaKnown RBP8.93□□□□□ -0.98
SSB-209ENST00000470621 ZNF746Q6NUN9 644 aaPredicted RBP8.93□□□□□ -0.98
SSB-209ENST00000470621 C22orf34Q6ZV56 151 aa8.93□□□□□ -0.98
SSB-209ENST00000470621 MFSD4AQ8N468 514 aa8.93□□□□□ -0.98
SSB-209ENST00000470621 KREMEN1Q96MU8 473 aa8.93□□□□□ -0.98
SSB-209ENST00000470621 SLC9A7Q96T83 725 aa8.93□□□□□ -0.98
SSB-209ENST00000470621 TNKS2Q9H2K2 1166 aa8.93□□□□□ -0.98
SSB-209ENST00000470621 BSDC1Q9NW68 430 aaPredicted RBP8.93□□□□□ -0.98
SSB-209ENST00000470621 CCDC39Q9UFE4 941 aa8.93□□□□□ -0.98
SSB-209ENST00000470621 LRRN2O75325 713 aa8.92□□□□□ -0.98
SSB-209ENST00000470621 YBX3P16989 372 aaKnown RBP eCLIP8.92□□□□□ -0.98
SSB-209ENST00000470621 TNK2Q07912 1038 aa8.92□□□□□ -0.98
SSB-209ENST00000470621 BNIP3Q12983 259 aa8.92□□□□□ -0.98
SSB-209ENST00000470621 LRRFIP1Q32MZ4 808 aaKnown RBP8.92□□□□□ -0.98
SSB-209ENST00000470621 ZNF574Q6ZN55 896 aaPredicted RBP8.92□□□□□ -0.98
SSB-209ENST00000470621 SRRTQ9BXP5 876 aaKnown RBP8.92□□□□□ -0.98
SSB-209ENST00000470621 PRNPP04156 253 aa8.91□□□□□ -0.98
SSB-209ENST00000470621 IMPDH2P12268 514 aa8.91□□□□□ -0.98
SSB-209ENST00000470621 CYP7A1P22680 504 aa8.91□□□□□ -0.98
SSB-209ENST00000470621 ZYXQ15942 572 aaKnown RBP8.91□□□□□ -0.98
SSB-209ENST00000470621 CDKAL1Q5VV42 579 aa8.91□□□□□ -0.98
SSB-209ENST00000470621 TMEM192Q8IY95 271 aa8.91□□□□□ -0.98
SSB-209ENST00000470621 RBBP8NLQ8NC74 664 aaPredicted RBP8.91□□□□□ -0.98
SSB-209ENST00000470621 VWCEQ96DN2 955 aa8.91□□□□□ -0.98
SSB-209ENST00000470621 SHDQ96IW2 340 aa8.91□□□□□ -0.98
SSB-209ENST00000470621 SEC16BQ96JE7 1060 aa8.91□□□□□ -0.98
SSB-209ENST00000470621 NPM2Q86SE8 214 aaKnown RBP8.9□□□□□ -0.98
SSB-209ENST00000470621 BCL7CQ8WUZ0 217 aaPredicted RBP8.9□□□□□ -0.98
SSB-209ENST00000470621 RNF141Q8WVD5 230 aa8.9□□□□□ -0.98
SSB-209ENST00000470621 ZNF512BQ96KM6 892 aaPredicted RBP8.9□□□□□ -0.98
SSB-209ENST00000470621 ST14Q9Y5Y6 855 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms