RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 KIF1CO43896 1103 aaKnown RBP18.72■□□□□ 0.59
HOXB3-205ENST00000470495 RAD51AP2Q09MP3 1159 aa18.72■□□□□ 0.59
HOXB3-205ENST00000470495 NOSTRINQ8IVI9 506 aa18.72■□□□□ 0.59
HOXB3-205ENST00000470495 ABCC12Q96J65 1359 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 MRC1P22897 1456 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 CALM1P0DP23 149 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 CALM2P0DP24 149 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 CALM3P0DP25 149 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 TTC19Q6DKK2 380 aaPredicted RBP18.71■□□□□ 0.59
HOXB3-205ENST00000470495 TMCO3Q6UWJ1 677 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 WDR66Q8TBY9 1149 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 LY9Q9HBG7 655 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 GGA1Q9UJY5 639 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 PLEKHG2Q9H7P9 1386 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 MCM7P33993 719 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 NR5A1Q13285 461 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 RILPL1Q5EBL4 403 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 FMNL3Q8IVF7 1028 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 TEX11Q8IYF3 940 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 FAM84BQ96KN1 310 aaPredicted RBP18.71■□□□□ 0.59
HOXB3-205ENST00000470495 PCMTD1Q96MG8 357 aaPredicted RBP18.71■□□□□ 0.59
HOXB3-205ENST00000470495 SEC63Q9UGP8 760 aaKnown RBP18.71■□□□□ 0.59
HOXB3-205ENST00000470495 POLR2DO15514 142 aaKnown RBP18.71■□□□□ 0.59
HOXB3-205ENST00000470495 C3orf67Q6ZVT6 689 aa18.71■□□□□ 0.59
HOXB3-205ENST00000470495 CAND2O75155 1236 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 DIXDC1Q155Q3 683 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 PDLIM2Q96JY6 352 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 CBFA2T2O43439 604 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 TRIM37O94972 964 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 ZRSR2Q15696 482 aaKnown RBP18.7■□□□□ 0.58
HOXB3-205ENST00000470495 PTF1AQ7RTS3 328 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 CEP57Q86XR8 500 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 ZC3H12CQ9C0D7 883 aaKnown RBP18.7■□□□□ 0.58
HOXB3-205ENST00000470495 KIAA1468Q9P260 1216 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 TRPM3Q9HCF6 1732 aaPredicted RBP18.7■□□□□ 0.58
HOXB3-205ENST00000470495 KIF28PB7ZC32 967 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 GBP2P32456 591 aaPredicted RBP18.7■□□□□ 0.58
HOXB3-205ENST00000470495 PNOCQ13519 176 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 RBBP5Q15291 538 aaKnown RBP18.7■□□□□ 0.58
HOXB3-205ENST00000470495 SEPT12Q8IYM1 358 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 CCDC47Q96A33 483 aaKnown RBP18.7■□□□□ 0.58
HOXB3-205ENST00000470495 SKILP12757 684 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 LIFRP42702 1097 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 LRMPQ12912 555 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 NBPF9Q3BBW0 867 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 BARGINQ6ZT62 677 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 SLF2Q8IX21 1173 aa18.7■□□□□ 0.58
HOXB3-205ENST00000470495 RBM17Q96I25 401 aaKnown RBP18.7■□□□□ 0.58
HOXB3-205ENST00000470495 VWA3AA6NCI4 1184 aa18.69■□□□□ 0.58
HOXB3-205ENST00000470495 ARL10Q8N8L6 244 aa18.69■□□□□ 0.58
HOXB3-205ENST00000470495 ZNF512BQ96KM6 892 aaPredicted RBP18.69■□□□□ 0.58
HOXB3-205ENST00000470495 POLR3EQ9NVU0 708 aa18.69■□□□□ 0.58
HOXB3-205ENST00000470495 NRBP1Q9UHY1 535 aa18.69■□□□□ 0.58
HOXB3-205ENST00000470495 PIK3AP1Q6ZUJ8 805 aa18.69■□□□□ 0.58
HOXB3-205ENST00000470495 CRACR2BQ8N4Y2 399 aaPredicted RBP18.69■□□□□ 0.58
HOXB3-205ENST00000470495 KIAA0754O94854 1291 aa18.69■□□□□ 0.58
HOXB3-205ENST00000470495 CYP2D6P10635 497 aa18.69■□□□□ 0.58
HOXB3-205ENST00000470495 UBASH3AP57075 661 aa18.69■□□□□ 0.58
HOXB3-205ENST00000470495 INF2Q27J81 1249 aa18.69■□□□□ 0.58
HOXB3-205ENST00000470495 HPS5Q9UPZ3 1129 aa18.69■□□□□ 0.58
HOXB3-205ENST00000470495 FGFR2P21802 821 aa18.68■□□□□ 0.58
HOXB3-205ENST00000470495 KLRK1P26718 216 aa18.68■□□□□ 0.58
HOXB3-205ENST00000470495 VGLL2Q8N8G2 317 aa18.68■□□□□ 0.58
HOXB3-205ENST00000470495 SPATS2LQ9NUQ6 558 aaKnown RBP18.68■□□□□ 0.58
HOXB3-205ENST00000470495 USP17L8P0C7I0 530 aa18.68■□□□□ 0.58
HOXB3-205ENST00000470495 TOP1P11387 765 aaKnown RBP18.68■□□□□ 0.58
HOXB3-205ENST00000470495 SLC39A14Q15043 492 aa18.68■□□□□ 0.58
HOXB3-205ENST00000470495 EIF6P56537 245 aaKnown RBP18.68■□□□□ 0.58
HOXB3-205ENST00000470495 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.68■□□□□ 0.58
HOXB3-205ENST00000470495 QTRT2Q9H974 415 aaKnown RBP18.68■□□□□ 0.58
HOXB3-205ENST00000470495 UBE2Q2LH0YL09 131 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 CUTAO60888 179 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 FMNL1O95466 1100 aaPredicted RBP18.67■□□□□ 0.58
HOXB3-205ENST00000470495 DBN1Q16643 649 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 ZSCAN26Q16670 478 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 CCDC96Q2M329 555 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 TNS2Q63HR2 1409 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 FRMD3A2A2Y4 597 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 RIOK3O14730 519 aaKnown RBP18.67■□□□□ 0.58
HOXB3-205ENST00000470495 IFNAR1P17181 557 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 CMA1P23946 247 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 PSEN1P49768 467 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 FILIP1LQ4L180 1135 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 STAG1Q8WVM7 1258 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 G3BP2Q9UN86 482 aaKnown RBP18.67■□□□□ 0.58
HOXB3-205ENST00000470495 STX17P56962 302 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 VPS72Q15906 364 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 MFSD14BQ5SR56 506 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 CDK5RAP3Q96JB5 506 aa18.67■□□□□ 0.58
HOXB3-205ENST00000470495 MARF1Q9Y4F3 1742 aaKnown RBP18.67■□□□□ 0.58
HOXB3-205ENST00000470495 PTPN14Q15678 1187 aa18.66■□□□□ 0.58
HOXB3-205ENST00000470495 ALX1Q15699 326 aa18.66■□□□□ 0.58
HOXB3-205ENST00000470495 IGDCC4Q8TDY8 1250 aa18.66■□□□□ 0.58
HOXB3-205ENST00000470495 CPLX3Q8WVH0 158 aa18.66■□□□□ 0.58
HOXB3-205ENST00000470495 STAMQ92783 540 aa18.66■□□□□ 0.58
HOXB3-205ENST00000470495 MYO1CO00159 1063 aa18.66■□□□□ 0.58
HOXB3-205ENST00000470495 NMT2O60551 498 aa18.66■□□□□ 0.58
HOXB3-205ENST00000470495 DPCR1Q3MIW9 517 aa18.66■□□□□ 0.58
HOXB3-205ENST00000470495 SYT10Q6XYQ8 523 aa18.66■□□□□ 0.58
HOXB3-205ENST00000470495 ALS2Q96Q42 1657 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms