RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 GRXCR1A8MXD5 290 aa12.73□□□□□ -0.37
HDAC3-203ENST00000467533 SEPT4O43236 478 aa12.73□□□□□ -0.37
HDAC3-203ENST00000467533 CNMDO75829 334 aa12.73□□□□□ -0.37
HDAC3-203ENST00000467533 GDF11O95390 407 aa12.73□□□□□ -0.37
HDAC3-203ENST00000467533 BMP1P13497 986 aa12.73□□□□□ -0.37
HDAC3-203ENST00000467533 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
HDAC3-203ENST00000467533 CCDC27Q2M243 656 aa12.73□□□□□ -0.37
HDAC3-203ENST00000467533 AAK1Q2M2I8 961 aa12.73□□□□□ -0.37
HDAC3-203ENST00000467533 FAM47AQ5JRC9 791 aa12.73□□□□□ -0.37
HDAC3-203ENST00000467533 SPTY2D1Q68D10 685 aaPredicted RBP12.73□□□□□ -0.37
HDAC3-203ENST00000467533 DPP9Q86TI2 863 aa12.73□□□□□ -0.37
HDAC3-203ENST00000467533 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.73□□□□□ -0.37
HDAC3-203ENST00000467533 TMEM39AQ9NV64 488 aa12.73□□□□□ -0.37
HDAC3-203ENST00000467533 CHD9Q3L8U1 2897 aa12.72□□□□□ -0.37
HDAC3-203ENST00000467533 KCNQ1P51787 676 aa12.72□□□□□ -0.37
HDAC3-203ENST00000467533 TFF2Q03403 129 aa12.72□□□□□ -0.37
HDAC3-203ENST00000467533 USP17L2Q6R6M4 530 aa12.72□□□□□ -0.37
HDAC3-203ENST00000467533 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
HDAC3-203ENST00000467533 CDK5RAP2Q96SN8 1893 aa12.72□□□□□ -0.37
HDAC3-203ENST00000467533 JAG1P78504 1218 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 MECOMQ03112 1051 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 RASGRF1Q13972 1273 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 SKIV2LQ15477 1246 aaKnown RBP12.71□□□□□ -0.37
HDAC3-203ENST00000467533 ZYXQ15942 572 aaKnown RBP12.71□□□□□ -0.37
HDAC3-203ENST00000467533 SHROOM1Q2M3G4 852 aaPredicted RBP12.71□□□□□ -0.37
HDAC3-203ENST00000467533 OLFML2BQ68BL8 750 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 CCDC174Q6PII3 467 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 ERICH6Q7L0X2 663 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 TEX11Q8IYF3 940 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 CRACR2BQ8N4Y2 399 aaPredicted RBP12.71□□□□□ -0.37
HDAC3-203ENST00000467533 SLC44A5Q8NCS7 719 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 FEZ1Q99689 392 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 SIL1Q9H173 461 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 EMILIN3Q9NT22 766 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 MSRAQ9UJ68 235 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 ZBTB21Q9ULJ3 1066 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 PHF24Q9UPV7 400 aa12.71□□□□□ -0.37
HDAC3-203ENST00000467533 FOCADQ5VW36 1801 aa12.71□□□□□ -0.38
HDAC3-203ENST00000467533 FAM86C2PA6NEL3 165 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 USP17L15C9J2P7 530 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 USP17L13C9JLJ4 530 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 USP17L11C9JVI0 530 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 USP17L18D6R9N7 530 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 USP17L22D6RA61 530 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 USP17L17D6RBQ6 530 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 USP17L19D6RCP7 530 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 USP17L20D6RJB6 530 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 MAP4K4O95819 1239 aaPredicted RBP12.7□□□□□ -0.38
HDAC3-203ENST00000467533 ADORA2AP29274 412 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 USP17L24Q0WX57 530 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 RAB30Q15771 203 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 CCDC102BQ68D86 513 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 ATG9AQ7Z3C6 839 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 XPNPEP3Q9NQH7 507 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 CEP126Q9P2H0 1117 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 PI4KBQ9UBF8 816 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 PIEZO1Q92508 2521 aa12.7□□□□□ -0.38
HDAC3-203ENST00000467533 PDS5AQ29RF7 1337 aaKnown RBP12.69□□□□□ -0.38
HDAC3-203ENST00000467533 MYO9BQ13459 2157 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 A0A1W2PQ45 241 aaPredicted RBP12.69□□□□□ -0.38
HDAC3-203ENST00000467533 A0A1W2PQY0 241 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 DCDC2CA8MYV0 355 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 IGHA2P01877 340 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 LDHCP07864 332 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 ADORA1P30542 326 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 RFX5P48382 616 aaPredicted RBP12.69□□□□□ -0.38
HDAC3-203ENST00000467533 GSTO1P78417 241 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 PPIGQ13427 754 aaKnown RBP eCLIP12.69□□□□□ -0.381e-6■■□□□ 12.7
HDAC3-203ENST00000467533 PRAMEF19Q5SWL8 479 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 RNF180Q86T96 592 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 NKX2-4Q9H2Z4 354 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 SLC28A3Q9HAS3 691 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 GINM1Q9NU53 330 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 BTBD7Q9P203 1132 aa12.69□□□□□ -0.38
HDAC3-203ENST00000467533 REV3LO60673 3130 aa12.68□□□□□ -0.38
HDAC3-203ENST00000467533 A0A0G2JMZ2 1700 aa12.68□□□□□ -0.38
HDAC3-203ENST00000467533 MUC6Q6W4X9 2439 aa12.68□□□□□ -0.38
HDAC3-203ENST00000467533 APBB1O00213 710 aa12.68□□□□□ -0.38
HDAC3-203ENST00000467533 TIMP1P01033 207 aa12.68□□□□□ -0.38
HDAC3-203ENST00000467533 RARBP10826 455 aa12.68□□□□□ -0.38
HDAC3-203ENST00000467533 MRE11P49959 708 aa12.68□□□□□ -0.38
HDAC3-203ENST00000467533 FAAP100Q0VG06 881 aa12.68□□□□□ -0.38
HDAC3-203ENST00000467533 TMEM240Q5SV17 173 aa12.68□□□□□ -0.38
HDAC3-203ENST00000467533 ZNF384Q8TF68 577 aa12.68□□□□□ -0.38
HDAC3-203ENST00000467533 C12orf42Q96LP6 360 aa12.68□□□□□ -0.38
HDAC3-203ENST00000467533 NOL10Q9BSC4 688 aaKnown RBP12.68□□□□□ -0.38
HDAC3-203ENST00000467533 DHX36Q9H2U1 1008 aaKnown RBP12.68□□□□□ -0.38
HDAC3-203ENST00000467533 DNAJC18Q9H819 358 aa12.68□□□□□ -0.38
HDAC3-203ENST00000467533 GPR37L1O60883 481 aa12.67□□□□□ -0.38
HDAC3-203ENST00000467533 PGK1P00558 417 aa12.67□□□□□ -0.38
HDAC3-203ENST00000467533 DDX10Q13206 875 aaKnown RBP12.67□□□□□ -0.38
HDAC3-203ENST00000467533 MFSD5Q6N075 450 aa12.67□□□□□ -0.38
HDAC3-203ENST00000467533 PSRC1Q6PGN9 363 aaPredicted RBP12.67□□□□□ -0.38
HDAC3-203ENST00000467533 CATSPERGQ6ZRH7 1159 aa12.67□□□□□ -0.38
HDAC3-203ENST00000467533 SH3RF3Q8TEJ3 882 aaPredicted RBP12.67□□□□□ -0.38
HDAC3-203ENST00000467533 C11orf16Q9NQ32 467 aa12.67□□□□□ -0.38
HDAC3-203ENST00000467533 SLC5A4Q9NY91 659 aa12.67□□□□□ -0.38
HDAC3-203ENST00000467533 SPDYE16A6NNV3 312 aaPredicted RBP12.66□□□□□ -0.38
HDAC3-203ENST00000467533 ERC2O15083 957 aa12.66□□□□□ -0.38
HDAC3-203ENST00000467533 ZBTB22O15209 634 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms