RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 APBA2Q99767 749 aa22.93■■□□□ 1.26
SRSF4-202ENST00000466448 EXOC6BQ9Y2D4 811 aa22.93■■□□□ 1.26
SRSF4-202ENST00000466448 MYO5AQ9Y4I1 1855 aaKnown RBP22.93■■□□□ 1.26
SRSF4-202ENST00000466448 USP17L15C9J2P7 530 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 USP17L13C9JLJ4 530 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 USP17L11C9JVI0 530 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 USP17L18D6R9N7 530 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 USP17L22D6RA61 530 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 USP17L17D6RBQ6 530 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 USP17L19D6RCP7 530 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 USP17L20D6RJB6 530 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 CCND3P30281 292 aaPredicted RBP22.92■■□□□ 1.26
SRSF4-202ENST00000466448 USP17L24Q0WX57 530 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 TTC6Q86TZ1 520 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 AACSQ86V21 672 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 RIOK1Q9BRS2 568 aaKnown RBP22.92■■□□□ 1.26
SRSF4-202ENST00000466448 KIAA1683Q9H0B3 1180 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 RABGAP1Q9Y3P9 1069 aa22.92■■□□□ 1.26
SRSF4-202ENST00000466448 COL6A1P12109 1028 aa22.91■■□□□ 1.26
SRSF4-202ENST00000466448 VCAM1P19320 739 aa22.91■■□□□ 1.26
SRSF4-202ENST00000466448 ABCB5Q2M3G0 1257 aa22.91■■□□□ 1.26
SRSF4-202ENST00000466448 CERKLQ49MI3 558 aaPredicted RBP22.91■■□□□ 1.26
SRSF4-202ENST00000466448 LHX8Q68G74 356 aa22.91■■□□□ 1.26
SRSF4-202ENST00000466448 TMED8Q6PL24 325 aaPredicted RBP22.91■■□□□ 1.26
SRSF4-202ENST00000466448 CATSPERGQ6ZRH7 1159 aa22.91■■□□□ 1.26
SRSF4-202ENST00000466448 ACER1Q8TDN7 264 aa22.91■■□□□ 1.26
SRSF4-202ENST00000466448 CWC22Q9HCG8 908 aaKnown RBP22.91■■□□□ 1.26
SRSF4-202ENST00000466448 SHMT1P34896 483 aa22.9■■□□□ 1.26
SRSF4-202ENST00000466448 PLCD1P51178 756 aa22.9■■□□□ 1.26
SRSF4-202ENST00000466448 USP14P54578 494 aa22.9■■□□□ 1.26
SRSF4-202ENST00000466448 HNRNPUQ00839 825 aaKnown RBP eCLIP22.9■■□□□ 1.26
SRSF4-202ENST00000466448 MAP2K5Q13163 448 aa22.9■■□□□ 1.26
SRSF4-202ENST00000466448 ERC1Q8IUD2 1116 aa22.9■■□□□ 1.26
SRSF4-202ENST00000466448 MAGEA10P43363 369 aaPredicted RBP22.89■■□□□ 1.25
SRSF4-202ENST00000466448 CCNA1P78396 465 aa22.89■■□□□ 1.25
SRSF4-202ENST00000466448 LBX2Q6XYB7 198 aa22.88■■□□□ 1.25
SRSF4-202ENST00000466448 EDC3Q96F86 508 aaKnown RBP22.88■■□□□ 1.25
SRSF4-202ENST00000466448 IL1RAPL2Q9NP60 686 aa22.88■■□□□ 1.25
SRSF4-202ENST00000466448 CABP5Q9NP86 173 aa22.88■■□□□ 1.25
SRSF4-202ENST00000466448 FLRT1Q9NZU1 646 aa22.88■■□□□ 1.25
SRSF4-202ENST00000466448 GLRX3O76003 335 aaKnown RBP22.87■■□□□ 1.25
SRSF4-202ENST00000466448 GUCY1A2P33402 732 aa22.87■■□□□ 1.25
SRSF4-202ENST00000466448 EVX2Q03828 476 aa22.87■■□□□ 1.25
SRSF4-202ENST00000466448 WDR78Q5VTH9 848 aa22.87■■□□□ 1.25
SRSF4-202ENST00000466448 BTBD7Q9P203 1132 aa22.87■■□□□ 1.25
SRSF4-202ENST00000466448 MAGEB6P1A0A0J9YX57 407 aa22.86■■□□□ 1.25
SRSF4-202ENST00000466448 SLC15A5A6NIM6 579 aa22.86■■□□□ 1.25
SRSF4-202ENST00000466448 POLR3DP05423 398 aaPredicted RBP22.86■■□□□ 1.25
SRSF4-202ENST00000466448 PTPREP23469 700 aa22.86■■□□□ 1.25
SRSF4-202ENST00000466448 GABPAQ06546 454 aa22.86■■□□□ 1.25
SRSF4-202ENST00000466448 PANK1Q8TE04 598 aa22.86■■□□□ 1.25
SRSF4-202ENST00000466448 RPAP3Q9H6T3 665 aaPredicted RBP22.86■■□□□ 1.25
SRSF4-202ENST00000466448 MYH1P12882 1939 aa22.86■■□□□ 1.25
SRSF4-202ENST00000466448 SPDYE16A6NNV3 312 aaPredicted RBP22.85■■□□□ 1.25
SRSF4-202ENST00000466448 PDE6AP16499 860 aa22.85■■□□□ 1.25
SRSF4-202ENST00000466448 SEPT2Q15019 361 aa22.85■■□□□ 1.25
SRSF4-202ENST00000466448 TTF1Q15361 905 aaPredicted RBP22.85■■□□□ 1.25
SRSF4-202ENST00000466448 LRRC26Q2I0M4 334 aa22.85■■□□□ 1.25
SRSF4-202ENST00000466448 SLC9C2Q5TAH2 1124 aa22.85■■□□□ 1.25
SRSF4-202ENST00000466448 RHPN1Q8TCX5 695 aa22.85■■□□□ 1.25
SRSF4-202ENST00000466448 HOXC6P09630 235 aa22.84■■□□□ 1.25
SRSF4-202ENST00000466448 LRIT3Q3SXY7 679 aa22.84■■□□□ 1.25
SRSF4-202ENST00000466448 MFSD14CQ5VZR4 134 aa22.84■■□□□ 1.25
SRSF4-202ENST00000466448 TDHQ8IZJ6 230 aa22.84■■□□□ 1.25
SRSF4-202ENST00000466448 CRNKL1Q9BZJ0 848 aaKnown RBP22.84■■□□□ 1.25
SRSF4-202ENST00000466448 MCM9Q9NXL9 1143 aa22.84■■□□□ 1.25
SRSF4-202ENST00000466448 A0A1W2PRG0 241 aa22.83■■□□□ 1.25
SRSF4-202ENST00000466448 GRB14Q14449 540 aa22.83■■□□□ 1.25
SRSF4-202ENST00000466448 HSP90AB4PQ58FF6 505 aa22.83■■□□□ 1.25
SRSF4-202ENST00000466448 GPR153Q6NV75 609 aa22.83■■□□□ 1.25
SRSF4-202ENST00000466448 UBE2OQ9C0C9 1292 aaKnown RBP22.83■■□□□ 1.25
SRSF4-202ENST00000466448 IVNS1ABPQ9Y6Y0 642 aa22.83■■□□□ 1.25
SRSF4-202ENST00000466448 COL6A3P12111 3177 aa22.83■■□□□ 1.25
SRSF4-202ENST00000466448 ZNF532Q9HCE3 1301 aa22.82■■□□□ 1.24
SRSF4-202ENST00000466448 MPHOSPH10O00566 681 aaKnown RBP22.82■■□□□ 1.24
SRSF4-202ENST00000466448 SLC17A8Q8NDX2 589 aa22.82■■□□□ 1.24
SRSF4-202ENST00000466448 TCRBV5S4A2TA0A5A2 114 aa22.81■■□□□ 1.24
SRSF4-202ENST00000466448 GOLIM4O00461 696 aa22.81■■□□□ 1.24
SRSF4-202ENST00000466448 CYP2C19P33261 490 aa22.81■■□□□ 1.24
SRSF4-202ENST00000466448 ATP2B2Q01814 1243 aa22.81■■□□□ 1.24
SRSF4-202ENST00000466448 LCORLQ8N3X6 602 aa22.81■■□□□ 1.24
SRSF4-202ENST00000466448 DEFB123Q8N688 67 aa22.81■■□□□ 1.24
SRSF4-202ENST00000466448 NPLOC4Q8TAT6 608 aa22.81■■□□□ 1.24
SRSF4-202ENST00000466448 SDR42E1Q8WUS8 393 aa22.81■■□□□ 1.24
SRSF4-202ENST00000466448 DNAJC2Q99543 621 aaKnown RBP22.81■■□□□ 1.24
SRSF4-202ENST00000466448 DDX20Q9UHI6 824 aaKnown RBP22.81■■□□□ 1.24
SRSF4-202ENST00000466448 APBB1O00213 710 aa22.8■■□□□ 1.24
SRSF4-202ENST00000466448 IGHA2P01877 340 aa22.8■■□□□ 1.24
SRSF4-202ENST00000466448 CYP2D6P10635 497 aa22.8■■□□□ 1.24
SRSF4-202ENST00000466448 CNGA1P29973 690 aa22.8■■□□□ 1.24
SRSF4-202ENST00000466448 Q7L0L9 218 aa22.8■■□□□ 1.24
SRSF4-202ENST00000466448 CLASRPQ8N2M8 674 aaKnown RBP22.8■■□□□ 1.24
SRSF4-202ENST00000466448 SLC44A5Q8NCS7 719 aa22.8■■□□□ 1.24
SRSF4-202ENST00000466448 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.8■■□□□ 1.244e-6■■□□□ 13.4
SRSF4-202ENST00000466448 DCP1AQ9NPI6 582 aaPredicted RBP22.8■■□□□ 1.24
SRSF4-202ENST00000466448 COG2Q14746 738 aa22.79■■□□□ 1.24
SRSF4-202ENST00000466448 TRPV1Q8NER1 839 aa22.79■■□□□ 1.24
SRSF4-202ENST00000466448 KIF1BPQ96EK5 621 aa22.79■■□□□ 1.24
SRSF4-202ENST00000466448 MOV10L1Q9BXT6 1211 aaKnown RBP22.79■■□□□ 1.24
SRSF4-202ENST00000466448 TANGO6Q9C0B7 1094 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms