RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 MAFAQ8NHW3 353 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-215ENST00000465457 TXNRD2Q9NNW7 524 aa16.53■□□□□ 0.24
HDAC6-215ENST00000465457 PHKA1P46020 1223 aa16.52■□□□□ 0.24
HDAC6-215ENST00000465457 ANAPC15P60006 121 aa16.52■□□□□ 0.24
HDAC6-215ENST00000465457 CACNB2Q08289 660 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-215ENST00000465457 DIAPH3Q9NSV4 1193 aa16.52■□□□□ 0.24
HDAC6-215ENST00000465457 SALL1Q9NSC2 1324 aa16.51■□□□□ 0.23
HDAC6-215ENST00000465457 GCLCP48506 637 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-215ENST00000465457 MYLIPQ8WY64 445 aa16.51■□□□□ 0.23
HDAC6-215ENST00000465457 LPIN2Q92539 896 aa16.51■□□□□ 0.23
HDAC6-215ENST00000465457 TBC1D2Q9BYX2 928 aa16.51■□□□□ 0.23
HDAC6-215ENST00000465457 CCDC8Q9H0W5 538 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-215ENST00000465457 CEP126Q9P2H0 1117 aa16.51■□□□□ 0.23
HDAC6-215ENST00000465457 ADORA1P30542 326 aa16.5■□□□□ 0.23
HDAC6-215ENST00000465457 BTDP43251 543 aa16.5■□□□□ 0.23
HDAC6-215ENST00000465457 C9orf50Q5SZB4 431 aa16.5■□□□□ 0.23
HDAC6-215ENST00000465457 ZNF280CQ8ND82 737 aa16.5■□□□□ 0.23
HDAC6-215ENST00000465457 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.5■□□□□ 0.23
HDAC6-215ENST00000465457 IL17RAQ96F46 866 aa16.5■□□□□ 0.23
HDAC6-215ENST00000465457 TTYH1Q9H313 450 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-215ENST00000465457 MORF4L1Q9UBU8 362 aa16.5■□□□□ 0.23
HDAC6-215ENST00000465457 DBNLQ9UJU6 430 aaKnown RBP16.5■□□□□ 0.23
HDAC6-215ENST00000465457 SGSM2O43147 1006 aa16.49■□□□□ 0.23
HDAC6-215ENST00000465457 ZKSCAN1P17029 563 aaPredicted RBP16.49■□□□□ 0.23
HDAC6-215ENST00000465457 ATN1P54259 1190 aaPredicted RBP16.49■□□□□ 0.23
HDAC6-215ENST00000465457 SHROOM1Q2M3G4 852 aaPredicted RBP16.49■□□□□ 0.23
HDAC6-215ENST00000465457 POTEEQ6S8J3 1075 aa16.49■□□□□ 0.23
HDAC6-215ENST00000465457 KIAA1211Q6ZU35 1233 aa16.49■□□□□ 0.23
HDAC6-215ENST00000465457 ZNF384Q8TF68 577 aa16.49■□□□□ 0.23
HDAC6-215ENST00000465457 KIF2CQ99661 725 aa16.49■□□□□ 0.23
HDAC6-215ENST00000465457 ANP32EQ9BTT0 268 aa16.49■□□□□ 0.23
HDAC6-215ENST00000465457 PORCNQ9H237 461 aa16.49■□□□□ 0.23
HDAC6-215ENST00000465457 ANO2Q9NQ90 1003 aa16.49■□□□□ 0.23
HDAC6-215ENST00000465457 COL9A1P20849 921 aa16.48■□□□□ 0.23
HDAC6-215ENST00000465457 RHBDL3P58872 404 aa16.48■□□□□ 0.23
HDAC6-215ENST00000465457 JAG1P78504 1218 aa16.48■□□□□ 0.23
HDAC6-215ENST00000465457 MTMR2Q13614 643 aa16.48■□□□□ 0.23
HDAC6-215ENST00000465457 SHHQ15465 462 aa16.48■□□□□ 0.23
HDAC6-215ENST00000465457 ATP2B3Q16720 1220 aa16.48■□□□□ 0.23
HDAC6-215ENST00000465457 USP6NLQ92738 828 aa16.48■□□□□ 0.23
HDAC6-215ENST00000465457 SEMA6BQ9H3T3 888 aa16.48■□□□□ 0.23
HDAC6-215ENST00000465457 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.48■□□□□ 0.23
HDAC6-215ENST00000465457 TLR7Q9NYK1 1049 aaKnown RBP16.48■□□□□ 0.23
HDAC6-215ENST00000465457 ST18O60284 1047 aa16.47■□□□□ 0.23
HDAC6-215ENST00000465457 RASGRF1Q13972 1273 aa16.47■□□□□ 0.23
HDAC6-215ENST00000465457 DZIP1Q86YF9 867 aaKnown RBP16.47■□□□□ 0.23
HDAC6-215ENST00000465457 P2RX7Q99572 595 aaKnown RBP16.47■□□□□ 0.23
HDAC6-215ENST00000465457 HAUS7Q99871 368 aa16.47■□□□□ 0.23
HDAC6-215ENST00000465457 NUDT12Q9BQG2 462 aa16.47■□□□□ 0.23
HDAC6-215ENST00000465457 SENP6Q9GZR1 1112 aaPredicted RBP16.47■□□□□ 0.23
HDAC6-215ENST00000465457 SNRKQ9NRH2 765 aa16.47■□□□□ 0.23
HDAC6-215ENST00000465457 FOCADQ5VW36 1801 aa16.47■□□□□ 0.23
HDAC6-215ENST00000465457 MROH7-TTC4A0A0A0MT08 1334 aa16.46■□□□□ 0.23
HDAC6-215ENST00000465457 XRCC5P13010 732 aaKnown RBP16.46■□□□□ 0.23
HDAC6-215ENST00000465457 LRRFIP1Q32MZ4 808 aaKnown RBP16.46■□□□□ 0.23
HDAC6-215ENST00000465457 Q3C1V9 767 aa16.46■□□□□ 0.23
HDAC6-215ENST00000465457 SH3D19Q5HYK7 790 aa16.46■□□□□ 0.23
HDAC6-215ENST00000465457 USP38Q8NB14 1042 aa16.46■□□□□ 0.23
HDAC6-215ENST00000465457 SOCS4Q8WXH5 440 aa16.46■□□□□ 0.23
HDAC6-215ENST00000465457 LBHD1Q9BQE6 289 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-215ENST00000465457 DBNDD2Q9BQY9 259 aa16.46■□□□□ 0.23
HDAC6-215ENST00000465457 FSD1Q9BTV5 496 aa16.46■□□□□ 0.23
HDAC6-215ENST00000465457 FLRT1Q9NZU1 646 aa16.46■□□□□ 0.23
HDAC6-215ENST00000465457 ABCF2Q9UG63 623 aa16.46■□□□□ 0.23
HDAC6-215ENST00000465457 A0A1B0GUL7 405 aa16.45■□□□□ 0.22
HDAC6-215ENST00000465457 TBC1D12O60347 775 aa16.45■□□□□ 0.22
HDAC6-215ENST00000465457 MAP4K4O95819 1239 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-215ENST00000465457 MCM2P49736 904 aa16.45■□□□□ 0.22
HDAC6-215ENST00000465457 HERVK_113P62684 666 aa16.45■□□□□ 0.22
HDAC6-215ENST00000465457 IRX3P78415 501 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-215ENST00000465457 OSBPL5Q9H0X9 879 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-215ENST00000465457 BOLA2Q9H3K6 86 aa16.45■□□□□ 0.22
HDAC6-215ENST00000465457 RBPJLQ9UBG7 517 aa16.45■□□□□ 0.22
HDAC6-215ENST00000465457 DENND2AQ9ULE3 1009 aa16.45■□□□□ 0.22
HDAC6-215ENST00000465457 NDUFB9Q9Y6M9 179 aa16.45■□□□□ 0.22
HDAC6-215ENST00000465457 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-215ENST00000465457 MYO5AQ9Y4I1 1855 aaKnown RBP16.44■□□□□ 0.22
HDAC6-215ENST00000465457 K7ELQ4 463 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-215ENST00000465457 FOSL2P15408 326 aa16.44■□□□□ 0.22
HDAC6-215ENST00000465457 HSPA4P34932 840 aa16.44■□□□□ 0.22
HDAC6-215ENST00000465457 CAP2P40123 477 aa16.44■□□□□ 0.22
HDAC6-215ENST00000465457 SLC4A3P48751 1232 aa16.44■□□□□ 0.22
HDAC6-215ENST00000465457 RTP1P59025 263 aa16.44■□□□□ 0.22
HDAC6-215ENST00000465457 PABPC4Q13310 644 aaKnown RBP eCLIP16.44■□□□□ 0.22
HDAC6-215ENST00000465457 CCDC158Q5M9N0 1113 aa16.44■□□□□ 0.22
HDAC6-215ENST00000465457 MORN1Q5T089 497 aa16.44■□□□□ 0.22
HDAC6-215ENST00000465457 CCDC102BQ68D86 513 aa16.44■□□□□ 0.22
HDAC6-215ENST00000465457 GPR142Q7Z601 462 aa16.44■□□□□ 0.22
HDAC6-215ENST00000465457 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
HDAC6-215ENST00000465457 APBA2Q99767 749 aa16.44■□□□□ 0.22
HDAC6-215ENST00000465457 NCOR1O75376 2440 aa16.44■□□□□ 0.22
HDAC6-215ENST00000465457 USP17L5A8MUK1 530 aa16.43■□□□□ 0.22
HDAC6-215ENST00000465457 MECOMQ03112 1051 aa16.43■□□□□ 0.22
HDAC6-215ENST00000465457 CWC27Q6UX04 472 aaKnown RBP16.43■□□□□ 0.22
HDAC6-215ENST00000465457 GPRC5AQ8NFJ5 357 aa16.43■□□□□ 0.22
HDAC6-215ENST00000465457 PAGR1Q9BTK6 254 aa16.43■□□□□ 0.22
HDAC6-215ENST00000465457 GNL3LQ9NVN8 582 aaKnown RBP16.43■□□□□ 0.22
HDAC6-215ENST00000465457 GPR75-ASB3A0A0A6YYF3 556 aa16.42■□□□□ 0.22
HDAC6-215ENST00000465457 SEMA3EO15041 775 aa16.42■□□□□ 0.22
HDAC6-215ENST00000465457 RGS2P41220 211 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 282.5 ms