RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 NFE2L3Q9Y4A8 694 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 AKAP11Q9UKA4 1901 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 RBL2Q08999 1139 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 NBPF9Q3BBW0 867 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 POTEDQ86YR6 584 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 HAUS7Q99871 368 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 CDCA7Q9BWT1 371 aaPredicted RBP7.33□□□□□ -1.24
SIK3-207ENST00000465421 PRDM11Q9NQV5 511 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 ABCC12Q96J65 1359 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 TARSL2A2RTX5 802 aaKnown RBP7.33□□□□□ -1.24
SIK3-207ENST00000465421 FOXN1O15353 648 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 USP8P40818 1118 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 MORC3Q14149 939 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 TRAPPC11Q7Z392 1133 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 CCDC125Q86Z20 511 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 OTUD6BQ8N6M0 293 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.33□□□□□ -1.24
SIK3-207ENST00000465421 CPLX3Q8WVH0 158 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 SH3GL2Q99962 352 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 RABEP2Q9H5N1 569 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 MAN1B1Q9UKM7 699 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 TTF2Q9UNY4 1162 aaKnown RBP7.33□□□□□ -1.24
SIK3-207ENST00000465421 THRAP3Q9Y2W1 955 aaKnown RBP7.33□□□□□ -1.24
SIK3-207ENST00000465421 SLIT2O94813 1529 aa7.33□□□□□ -1.24
SIK3-207ENST00000465421 TIAM2Q8IVF5 1701 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 EBAG9O00559 213 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 EIF3HO15372 352 aaKnown RBP eCLIP7.32□□□□□ -1.24
SIK3-207ENST00000465421 TEX33O43247 280 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 MFAP3LO75121 409 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 FSBPO95073 299 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 SATB1Q01826 763 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 NCAPH2Q6IBW4 605 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 SYNE3Q6ZMZ3 975 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 NME8Q8N427 588 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 XAGE3Q8WTP9 111 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 EHD4Q9H223 541 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.32□□□□□ -1.24
SIK3-207ENST00000465421 SAMSN1Q9NSI8 373 aaKnown RBP7.32□□□□□ -1.24
SIK3-207ENST00000465421 MYO6Q9UM54 1294 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 PPFIA1Q13136 1202 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 STIM1Q13586 685 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 TNNI3KQ59H18 835 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 EPHA10Q5JZY3 1008 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 SPECC1Q5M775 1068 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 CPLX2Q6PUV4 134 aaKnown RBP7.32□□□□□ -1.24
SIK3-207ENST00000465421 ANKRD23Q86SG2 305 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 NUTM2AQ8IVF1 878 aaPredicted RBP7.32□□□□□ -1.24
SIK3-207ENST00000465421 AMOTL1Q8IY63 956 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 DDX17Q92841 729 aaKnown RBP7.32□□□□□ -1.24
SIK3-207ENST00000465421 HINFPQ9BQA5 517 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 NBPF3Q9H094 633 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 MCM8Q9UJA3 840 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 FPGT-TNNI3KV9GXZ4 949 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 BCL9LQ86UU0 1499 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 RXRAP19793 462 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 INPP5BP32019 993 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 FOXO4P98177 505 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 PTPN12Q05209 780 aaKnown RBP7.32□□□□□ -1.24
SIK3-207ENST00000465421 MLKLQ8NB16 471 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 FAM76AQ8TAV0 307 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 SMARCC1Q92922 1105 aaPredicted RBP7.32□□□□□ -1.24
SIK3-207ENST00000465421 PLA2G12BQ9BX93 195 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 HELLSQ9NRZ9 838 aa7.32□□□□□ -1.24
SIK3-207ENST00000465421 GNL3LQ9NVN8 582 aaKnown RBP7.32□□□□□ -1.24
SIK3-207ENST00000465421 KIAA1551Q9HCM1 1747 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 CIAO1O76071 339 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 MYBL2P10244 700 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 HSPD1P10809 573 aaKnown RBP7.31□□□□□ -1.24
SIK3-207ENST00000465421 ZC3H6P61129 1189 aaKnown RBP7.31□□□□□ -1.24
SIK3-207ENST00000465421 ERVK-24P63145 666 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 SLC9C2Q5TAH2 1124 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 CCDC102BQ68D86 513 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 KBTBD3Q8NAB2 608 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 ACRBPQ8NEB7 543 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 CCDC148Q8NFR7 591 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 SPATA20Q8TB22 786 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 CABS1Q96KC9 395 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 PAGR1Q9BTK6 254 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 KCNH3Q9ULD8 1083 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 NBPF26B4DH59 902 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 GYPCP04921 128 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 MCM3P25205 808 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 TRIM28Q13263 835 aaKnown RBP7.31□□□□□ -1.24
SIK3-207ENST00000465421 MAP9Q49MG5 647 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 NBPF14Q5TI25 921 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 ANKRD13DQ6ZTN6 518 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 RIC3Q7Z5B4 369 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 TRMT44Q8IYL2 757 aaKnown RBP7.31□□□□□ -1.24
SIK3-207ENST00000465421 NBPF15Q8N660 670 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 ZKSCAN4Q969J2 545 aaPredicted RBP7.31□□□□□ -1.24
SIK3-207ENST00000465421 ADD3Q9UEY8 706 aaKnown RBP7.31□□□□□ -1.24
SIK3-207ENST00000465421 PSMD14O00487 310 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 SKOR1P84550 965 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 PPARDQ03181 441 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 NEXNQ0ZGT2 675 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 SETDB1Q15047 1291 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 ZMYM1Q5SVZ6 1142 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 WLSQ5T9L3 541 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 CDKAL1Q5VV42 579 aa7.31□□□□□ -1.24
SIK3-207ENST00000465421 GBP6Q6ZN66 633 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms