RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 MSCO60682 206 aa14.34□□□□□ -0.11
PCYT1A-213ENST00000460827 HOXC6P09630 235 aa14.34□□□□□ -0.11
PCYT1A-213ENST00000460827 ARID4AP29374 1257 aaPredicted RBP14.34□□□□□ -0.11
PCYT1A-213ENST00000460827 GINM1Q9NU53 330 aa14.34□□□□□ -0.11
PCYT1A-213ENST00000460827 PRKAG2Q9UGJ0 569 aa14.34□□□□□ -0.11
PCYT1A-213ENST00000460827 SLC15A5A6NIM6 579 aa14.33□□□□□ -0.12
PCYT1A-213ENST00000460827 PTPREP23469 700 aa14.33□□□□□ -0.12
PCYT1A-213ENST00000460827 CYP2C19P33261 490 aa14.33□□□□□ -0.12
PCYT1A-213ENST00000460827 MCAMP43121 646 aa14.33□□□□□ -0.12
PCYT1A-213ENST00000460827 SMAD3P84022 425 aaKnown RBP14.33□□□□□ -0.12
PCYT1A-213ENST00000460827 ALDH1L2Q3SY69 923 aa14.33□□□□□ -0.12
PCYT1A-213ENST00000460827 USP17L2Q6R6M4 530 aa14.33□□□□□ -0.12
PCYT1A-213ENST00000460827 FOXP4Q8IVH2 680 aaPredicted RBP14.33□□□□□ -0.12
PCYT1A-213ENST00000460827 NEUROD6Q96NK8 337 aa14.33□□□□□ -0.12
PCYT1A-213ENST00000460827 PALD1Q9ULE6 856 aa14.33□□□□□ -0.12
PCYT1A-213ENST00000460827 ATP11BQ9Y2G3 1177 aa14.33□□□□□ -0.12
PCYT1A-213ENST00000460827 FLT1P17948 1338 aa14.33□□□□□ -0.12
PCYT1A-213ENST00000460827 GLRX3O76003 335 aaKnown RBP14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 CYBAP13498 195 aa14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 CNGA1P29973 690 aa14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 PPP4CP60510 307 aa14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 GRB14Q14449 540 aa14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 GJC2Q5T442 439 aaPredicted RBP14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 ADGRA1Q86SQ6 560 aa14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 MAPKAPK5Q8IW41 473 aa14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 NPLOC4Q8TAT6 608 aa14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 TGFBRAP1Q8WUH2 860 aa14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 C12orf42Q96LP6 360 aa14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 MEIS3Q99687 375 aa14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 CWC22Q9HCG8 908 aaKnown RBP14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 AATFQ9NY61 560 aaKnown RBP eCLIP14.32□□□□□ -0.12
PCYT1A-213ENST00000460827 MYH1P12882 1939 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 CCNA1P78396 465 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 ATP2B2Q01814 1243 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 SNX17Q15036 470 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 LBX2Q6XYB7 198 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 SLC39A5Q6ZMH5 540 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 FAM9BQ8IZU0 186 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 CRACR2BQ8N4Y2 399 aaPredicted RBP14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 BADQ92934 168 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 PDLIM7Q9NR12 457 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 SMC4Q9NTJ3 1288 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 BTBD7Q9P203 1132 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 LRP2BPQ9P2M1 347 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 HDAC5Q9UQL6 1122 aa14.31□□□□□ -0.12
PCYT1A-213ENST00000460827 ZNF236Q9UL36 1845 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 TRIM43BA6NCK2 446 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 USP17L15C9J2P7 530 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 USP17L13C9JLJ4 530 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 USP17L11C9JVI0 530 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 USP17L18D6R9N7 530 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 USP17L22D6RA61 530 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 USP17L17D6RBQ6 530 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 USP17L19D6RCP7 530 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 USP17L20D6RJB6 530 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 E9PSI1 815 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 SRGAP3O43295 1099 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 BAG3O95817 575 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 GH2P01242 217 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 FOSL2P15408 326 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 PLCG2P16885 1265 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 USP17L24Q0WX57 530 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 MTX1Q13505 466 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 WDR78Q5VTH9 848 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 NAA16Q6N069 864 aaPredicted RBP14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 CATSPERGQ6ZRH7 1159 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 SH3RF1Q7Z6J0 888 aa14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 SYMPKQ92797 1274 aaKnown RBP14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 TRIM43Q96BQ3 446 aaPredicted RBP14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 NOL10Q9BSC4 688 aaKnown RBP14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 PRDM5Q9NQX1 630 aaPredicted RBP14.3□□□□□ -0.12
PCYT1A-213ENST00000460827 ZYXQ15942 572 aaKnown RBP14.29□□□□□ -0.12
PCYT1A-213ENST00000460827 TRIM60Q495X7 471 aa14.29□□□□□ -0.12
PCYT1A-213ENST00000460827 GORABQ5T7V8 394 aa14.29□□□□□ -0.12
PCYT1A-213ENST00000460827 USP38Q8NB14 1042 aa14.29□□□□□ -0.12
PCYT1A-213ENST00000460827 ARRDC4Q8NCT1 418 aa14.29□□□□□ -0.12
PCYT1A-213ENST00000460827 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
PCYT1A-213ENST00000460827 SAP30BPQ9UHR5 308 aaKnown RBP14.29□□□□□ -0.12
PCYT1A-213ENST00000460827 ZNFX1Q9P2E3 1918 aaKnown RBP14.29□□□□□ -0.12
PCYT1A-213ENST00000460827 PIEZO1Q92508 2521 aa14.29□□□□□ -0.12
PCYT1A-213ENST00000460827 SPDYE16A6NNV3 312 aaPredicted RBP14.28□□□□□ -0.12
PCYT1A-213ENST00000460827 VCAM1P19320 739 aa14.28□□□□□ -0.12
PCYT1A-213ENST00000460827 COL9A1P20849 921 aa14.28□□□□□ -0.12
PCYT1A-213ENST00000460827 ITGB8P26012 769 aa14.28□□□□□ -0.12
PCYT1A-213ENST00000460827 SLFN5Q08AF3 891 aa14.28□□□□□ -0.12
PCYT1A-213ENST00000460827 ANO1Q5XXA6 986 aa14.28□□□□□ -0.12
PCYT1A-213ENST00000460827 OLFML2BQ68BL8 750 aa14.28□□□□□ -0.12
PCYT1A-213ENST00000460827 KIAA1683Q9H0B3 1180 aa14.28□□□□□ -0.12
PCYT1A-213ENST00000460827 SNRKQ9NRH2 765 aa14.28□□□□□ -0.12
PCYT1A-213ENST00000460827 NOB1Q9ULX3 412 aaKnown RBP14.28□□□□□ -0.12
PCYT1A-213ENST00000460827 IVNS1ABPQ9Y6Y0 642 aa14.28□□□□□ -0.12
PCYT1A-213ENST00000460827 TMEM265A0A087WTH1 108 aa14.27□□□□□ -0.13
PCYT1A-213ENST00000460827 KBTBD13C9JR72 458 aa14.27□□□□□ -0.13
PCYT1A-213ENST00000460827 UQCRFS1P1P0C7P4 283 aa14.27□□□□□ -0.13
PCYT1A-213ENST00000460827 EPHB4P54760 987 aa14.27□□□□□ -0.13
PCYT1A-213ENST00000460827 C1orf53Q5VUE5 145 aa14.27□□□□□ -0.13
PCYT1A-213ENST00000460827 TATDN1Q6P1N9 297 aa14.27□□□□□ -0.13
PCYT1A-213ENST00000460827 ACER1Q8TDN7 264 aa14.27□□□□□ -0.13
PCYT1A-213ENST00000460827 FEZ1Q99689 392 aa14.27□□□□□ -0.13
PCYT1A-213ENST00000460827 C19orf67A6NJJ6 358 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms